Coexpression cluster:C3865: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.093876664860668,-0.044173105995359,-0.0359382074538277,-0.218383081112806,0.0464840366886652,-0.0849583937139485,-0.182112339410151,-0.0498913700790627,-0.0296861183918977,0.0274943505335128,-0.0291356398474666,-0.056912009193844,-0.206746034583496,0.197103432452669,0.339700666080943,-0.076364731427114,-0.065974299273521,-0.015654898960508,0.0169438073061654,-0.279340977547823,-0.134322665070369,-0.183806468782914,-0.0833786696402394,-0.0983063993102987,-0.140587579971999,0.132437903722043,0.169653990480401,0.166780536073575,-0.155813628905976,-0.000666743832428374,-0.16960949056943,0.0267221909105649,0.0482745612881647,-0.0649148180237832,0.0304883418160588,0.0896673724303355,0.135874084368314,-0.218102968348553,-0.0858905512351905,-0.0591584783322208,-0.0737619953424012,0.197316993952199,-0.237543620501421,-0.460615701983644,-0.519572212969001,-0.425246434416655,-0.428810290916314,-0.36999352770223,-0.519572212969001,-0.519572212969001,-0.519572212969001,-0.18063564127507,-0.421854268798588,-0.303278368797426,-0.271453450801844,-0.442182927379942,-0.414775828179844,-0.358369882577526,-0.447350240509943,-0.39869272917526,-0.519572212969001,-0.519572212969001,-0.519572212969001,-0.365384244097603,-0.519572212969001,-0.313957589803261,-0.519572212969001,-0.428142606580681,-0.519572212969001,-0.362908691463242,-0.069908948916842,-0.38339798433959,-0.519572212969001,-0.267663551800868,-0.365693778681748,-0.378813347940321,-0.316300212318706,-0.451259693070055,-0.402880725618379,-0.410664778290746,-0.564519770870956,-0.45353993090058,-0.07866904039951,-0.0982289683520686,0.0716316852030893,-0.0870966492646055,0.0335278311175848,-0.0843240864834602,0.0527214880512724,-0.439319320424622,-0.0869814669186485,0.0680587629298516,-0.187776644252014,-0.15376362637239,-0.0087546141332664,0.205362664222947,0.527752542373458,0.559143712352279,0.59185453990393,0.681267293333425,0.897001972551182,0.769670245377939,0.831275263132343,0.691634660262322,0.778292824244579,0.731739275407229,0.696219169587635,0.632514410809277,0.679819957982181,0.560236121482064,0.473564121591793,0.609522297100305,0.793742856687715,0.793132136423593,0.729030785112259,0.641310659500214,0.661675476129841,0.656540288491785,0.491855204507032,0.657007446178298,0.669246353873212,0.504202857030005,0.647814125869653,0.688266904545837,0.684322072980948,0.694167488681649,0.760660403617433,0.304255462765009,0.155444829611832,0.215676285591372,0.125783164525768,0.181495152088263,-0.035870689539254,0.145147221418346,0.0253251065740505,-0.00227597778142108,0.136756950223068,-0.0406736028076258,-0.0585697398952352,-0.106873644884664,-0.0332645624522941,0.0719698993338731,-0.0506477515441491,-0.0875505542330147,-0.302326594060489,-0.140622636406079,-0.204933291340627,-0.11743192009339,-0.0026430929415594,-0.0869818419757443,0.112532598219716,0.146371165623966,0.095774298513967,0.17971393550034,0.119515208434198,0.181065295538928,-0.029620808052556,-0.0658174509646088,-0.135207139400553,-0.0924752827383514,0.0915808253108374,0.206857994879955,-0.0851413274892656,0.145374443598402,0.107851797448687,0.304045342394728,0.245201018227422,0.305241289315671,-0.115908498415963,0.15311368776231,-0.115946186418969,-0.6433087722433,-0.519572212969001,-0.156283318585019,0.0948966441901031,0.0916564183366516,0.297740467054333,0.166495134640662,0.10285066057756,-0.192958819979049,-0.147074009535541,-0.0359419422437097,0.109411337458986,0.0353824541901883,0.200145410610832,-0.069894973765627,-0.0543786002938603,0.00459200516951652,0.127200050811734,0.131588515033529,0.112669495401612,0.000696336641691553,-0.0002354861325089,0.0096664868490517,-0.0569287185109102,-0.0129295118764735,-0.0792081850736744,0.0088309601154104,-0.0185657972042919,-0.362238716179223,-0.25641113731242,-0.090100255152219,0.0202051426329668,-0.10003844761014,-0.0793071060988797,-0.239769782734175,-0.127679204818261,0.125890063184018,-0.120595273056559,-0.08684992951511,-0.120701426876935,-0.0673948010712039,-0.164482864546826,-0.118353477943516,-0.0922400319048636,0.0275755915969806,-0.14590305004529,0.0575484991436006,-0.149551395627631,0.0150491607550193,-0.147756448871807,-0.119676820248182,-0.0553641095249672,-0.060757063569601,0.111155948328876,-0.084871192966768,0.0169198333481455,-0.106212553939683,-0.0028646699824858,0.0067319780394689,-0.0503908792291793,-0.0983256536968296,-0.234306860835154,-0.105334139964483,-0.067809360385476,0.0213064985616485,-0.00342458806154855,0.232150354344783,0.206052210138087,0.284643439157494,0.225749806630641,0.221113535093232,0.325382945599555,0.237755157368835,0.172783693918767,0.332786033230698,0.0598243313064472,0.0732999244671607,0.029173875837728,-0.337543557062589,0.222254241895367,-0.0474516685795195,0.191013002351369,-0.6433087722433,-0.0890913936580303,-0.144358215388493,0.124103362006295,-0.00795150381612297,0.0116868632847797,0.256737755376934,-0.172773357703143,-0.0284321798016967,-0.131593032546688,-0.244137935637675,-0.182295305310988,-0.0830283538272544,-0.0158508848773959,-0.0165250361027895,0.0847525018603642,-0.00660063801587085,-0.0462057629171785,0.134610489596202,0.045727780352657,-0.0536213440963974,0.194240179188209,0.171553114856943,0.0801830248708648,0.0841279526859248,-0.211702924185008,0.404187085581805,0.0617755011752362,0.256864136751805,0.152241266758673,0.118526531493588,0.268831592131469,0.471021184021594,0.419257052504188,-0.0864868383190228,0.37177646221935,0.0489917635315359,0.343046967575084,-0.101682851785397,-0.156358950515763,-0.109261912982608,0.0449465093332025,-0.519572212969001,0.198639885375524,-0.264827370421588,-0.519572212969001,0.063545037168141,-0.00964393845368439,-0.0624543697294653,0.0559550477635794,-0.519572212969001,-0.0974988488778744,-0.00367807307746559,-0.0760026289371962,0.0295412472553469,0.116624589034302,0.209403527788836,0.126975651156388,-0.107701311914601,-0.244194062873277,-0.0128617306661046,-0.11230930560711,-0.187412728707931,-0.258351914556215,0.11085535956118,-0.00632270168142668,-0.00618788535496195,-0.00356792467834266,0.419157586264536,0.243309584998912,0.257737664760947,-0.151039370177952,-0.281316939269133,-0.481476352858025,-0.306326227021796,-0.305274555053991,-0.6433087722433,-0.6433087722433,-0.257398631870425,0.0627075962913597,0.0825988486875935,0.0807378792818962,0.0133168439136067,-0.0748577628522036,-0.0649417281584753,-0.0979716074944066,-0.244547768287792,-0.00448358391397374,-0.0325100330294267,0.116024917422344,-0.159625956085304,-0.0966280904116994,-0.305888061085748,-0.391449822903505,0.441571738155455,0.167528155048071,0.352517555519259,-0.0378662700032212,-0.00695040219796605,0.0129288320150737,0.0307819943635103,0.0127535137246892,-0.0907960821853498,-0.0733538801308782,-0.115573392152681,-0.0526679750225478,-0.124389035828184,-0.0304656041122873,-0.135668237969501,-0.0113492053961911,0.0948531974250205,0.0170389916189341,-0.262832547803165,0.0375238524341611,0.0521275920312245,0.0678050905871368,-0.0981623616927504,0.0234229021519751,-0.130624634183729,-0.128056421474801,-0.204815887185259,-0.12839138474753,-0.107401667199369,-0.313436410184904,-0.0346023519165721,-0.0160721229804789,-0.114350108691984,-0.106937477952824,-0.342991989634106,-0.162708924593432,-0.380602399774932,-0.190850705192264,-0.326308849927808,-0.278462001376192,-0.123736559274299,-0.00892423872464498,0.198922760527317,-0.06400592501531,-0.216967692861823,-0.22003176158805,0.0599159862191379,0.149116676615338,0.10508919326193,0.0135300861862279,0.069283075325335,0.181444022154759,0.034986421018135,0.13794906893972,0.0379711373898142,0.0620534978283768,-0.0230712678733797,0.0797789566856975,-0.115162646814671,0.197367154379675,-0.148554181039036,-0.234084419460104,-0.0139222115912304,-0.351118158896607,-0.190644264477609,-0.107644364875069,-0.00192924327067001,-0.158360259940618,-0.0561991001231238,-0.173337476923481,0.0376204841189288,0.0449545132905436,-0.124389663875996,0.0425628674497827,-0.163008509761547,-0.0263299826504313,-0.0350147332430351,-0.0967818202846106,-0.0420442380078599,-0.0164635917987342,0.100585339930624,-0.0897676670564922,0.0881755282716109,0.00132563445130873,0.135381581686954,-0.0470288444554866,0.0470659637751808,0.179539376035947,0.0552489508809308,-0.152798608720557,-0.0833177716843968,-0.0268415962750231,-0.155623925336662,-0.102217945606706,-0.0860084796739689,-0.0887472886649889,0.0792790669975981,0.043044657934809,-0.10596966031484,-0.101314470225553,0.100211110989633,0.040855628663235,0.163534616753348,0.0181893552620528,-0.0394697404448798,0.0250179094983868,0.16588377425682,0.0402631694867482,-0.0423214442659596,-0.0898310892835923,-0.200246058060121,0.121926866809864,0.316646146669166,0.159633197598479,0.321037552597202,0.492887021331506,0.352772872823189,0.43463033407333,0.321808897178629,0.39095222794951,-0.6433087722433,-0.6433087722433,-0.0136951365766714,-0.327169386383055,-0.6433087722433,-0.6433087722433,-0.6433087722433,0.348868834304342,0.1454524920102,-0.6433087722433,-0.6433087722433,0.120866104206458,-0.356270860814562,0.172127765174665,-0.519572212969001,-0.6433087722433,-0.103617675096487,-0.0398533988858703,0.418207995845108,0.0359881614142765,0.0637504637214247,-0.00430649049234111,0.0260714453833389,0.264337829275625,-0.173657089445989,0.0197232343561871,0.104704457482152,0.310630939601439,0.262452053177918,0.418585223420969,-0.06539719578608,-0.6433087722433,0.129250627565241,-0.298117958872922,0.0103000200131326,0.163516343449447,0.0845836999681225,-0.430498516519672,-0.0244422944492739,0.0180947278250347,0.569591244576942,-0.377429728299546,0.0366377670973295,0.167776109942182,-0.0387379080432723,0.204317099001399,0.0503050849271859,-0.187639919807553,0.223903832883601,0.0615480510814423,0.294889894339301,-0.155956623951029,0.243080985940274,0.216463922908536,-0.0514220597524073,-0.0873071549446248,-0.6433087722433,-0.234633616582184,-0.389289919467916,-0.0651442893447727,0.0229848222355624,0.238109833935269,0.264727267961354,-0.295093866953579,-0.53071751485777,0.113782594462701,0.0913876244826323,0.103532769754935,0.121202462260667,0.257958427105253,0.157398489028728,-0.115474722539255,0.363192822318559,-0.2162960145239,-0.0659277333202413,-0.0516660558827073,0.192247688767676,0.150679525386564,0.386874845926993,-0.0928346807571967,-0.307213761896991,-0.0792141893442743,-0.6433087722433,-0.109672454883126,0.0438361173072592,0.386099901838099,0.348927150252056,0.344657754554351,0.374252463323052,-0.133889236723832,-0.0268145267312735,-0.260417140372638,-0.324943475023203,-0.040503528830942,0.054011930562551,-0.157130631523589,-0.191048334430192,0.166596864609804,0.186087126387636,0.167386720117586,0.110558850618438,0.177420847221614,-0.0270381054073443,0.0736337046391167,0.23599402050953,0.141906277822824,0.500375533430421,0.123076457766122,-0.327072859854363,0.183197793216225,-0.219480250852868,0.0481471736962336,0.0437445559092196,-0.0337331388580807,0.218742563524721,-0.17819224123597,-0.00411215657433783,-0.6433087722433,-0.130587484122582,0.172366045383494,0.0166904279077276,0.0418941699177966,-0.13655310907579,0.219368802413404,0.112785784388921,0.216476264338927,-0.171702833197414,-0.6433087722433,0.0209280350033912,-0.0752861194070799,-0.17867467164615,-0.0370437140952755,0.142086693586513,0.12678351946792,-0.0233997895116406,-0.0638299133348864,0.0944246464106014,-0.6433087722433,0.073394104901973,0.453339259687821,0.291138140106369,0.361208975692839,-0.146836528724878,-0.231451457194515,-0.0223712059065919,-0.16292031687014,0.0121213910802221,0.132927050399134,-0.0924775035933129,0.0277031936929849,0.328395643835921,0.0883426887412415,0.199186326787212,0.142180397906259,-0.0417718769864296,0.127204707407323,-0.0109031830003633,0.00273767551419046,-0.201321075683697,-0.184122437519022,-0.0594081467580831,-0.0456503485796476,-0.0490584133936811,0.147115784557556,0.0388633851099941,-0.106195426361612,0.035263846221823,-0.0353918388537704,-0.0204617127506179,-0.051345063969577,0.0984376308364003,0.170887289828297,-0.00569641526413667,-0.217175460362275,0.201042504587801,0.0689408575674725,0.180509272459773,0.371960919247352,0.0608528232620792,0.183902950718909,-0.153301716925744,0.305217871244062,-0.200258074704181,-0.0878921128083717,-0.0854770076927556,0.241998559147765,0.14395391409223,0.000909210089268697,0.050911205400326,-0.0350259249856316,-0.15313638790543,0.157048770556213,0.127619747383979,0.0929488758448306,0.456217006882699,-0.118351730535285,0.0209287091455217,0.0678562850453862,0.266736647202406,0.705814368548461,0.0677344679560274,0.0310676111375515,0.231652307816763,0.187250046218819,0.083606619954302,-0.00170250473759137,0.348700495262202,-0.244014824860247,-0.0357833429952265,0.199748023276416,0.133513065446268,0.147392712972166,0.123365720143959,-0.492538243420634,0.301555870755754,0.68490761368632,0.473838679559734,-0.117919492817271,-0.6433087722433,0.145354096209742,-0.0552689086232152,-0.0277316879318816,0.00521906479723755,-0.1189955373115,-0.0785096896306067,0.0450268280580004,0.0266298834814678,-0.119499117740002,-0.0866334990392591,-0.132878472379622,-0.22825207839591,0.0598301898841045,-0.210677348732497,-0.0950084266294937,-0.264897238986407,-0.114256315901016,-0.0813179540171631,-0.00305914625171844,-0.0375060148139561,-0.222258276341796,-0.00693827868764685,-0.187530034990246,0.0875304305891849,0.0602335952587503,0.00348270989455812,-0.027739658174181,0.027426462610719,0.148792899747122,0.0269666778105654,-0.110321357464513,0.0127926280098625,0.281489477933435,0.265034913367945,-0.133481742517083,-0.114053870746691,0.134464175862657,-0.0220904524826557,-0.394929335340504,-0.18059864221525,0.10583576837834,-0.294546529112417,0.175048728223045,0.250747908276494,0.125440864068306,0.102512867329592,0.252651974104245,-0.0992081276222598,0.0233031240682515,0.161996270495783,-0.218555902297263,0.0694231899352468,0.160648097626122,0.100210997490525,0.288573216338343,-0.03293086774817,0.0854134615071451,-0.108015531581983,0.154887024639817,-0.6433087722433,-0.171170793758754,0.170964804062352,-0.6433087722433,-0.547138896294093,-0.537508639238288,-0.163160559420273,-0.6433087722433,-0.6433087722433,-0.137428365051007,-0.232812198183985,0.0884939783773647,-0.0596644200715425,0.0685211962645385,0.0280579833059305,-0.216746482483775,-0.0486845712017857,-0.0720092874673249,0.180286993898414,-0.144079047958389,0.200331405214232,0.0426120708774755,0.000323127049778105,-0.17987711501629,0.122547425902932,0.226678353905575,0.0315301082869881,0.142166315628237,0.171294294954377,0.173151396496269,-0.0992751785887809,0.0937386009156222,0.0484073261352235,-0.110966610774113,0.114601523800136,0.0440007171061503,-0.453825530550045,0.0413395300595784,0.0798639319673916,-0.381737041880216,-0.187161660146652,0.25071189711754,0.449408439059408,0.147113614806697,0.408017897642325,-0.186525383276595,0.0779788535153664,0.0333781592753093,0.0691977050439023,-0.115959920115811,0.289089281283208,0.166273746812713,-0.017594854054812,-0.0428590637936125,0.120239472935129,0.0532385560519777,0.204632174916309,0.0659901335580462,0.199420387282974,-0.6433087722433,0.126226574700253,-0.6433087722433,-0.0305432217378191,0.256653735520602,0.241261478747845,0.123016138639172,0.083744490734226,-0.0589811650285114,-0.0458949906437361,0.371083094134647,-0.125971826018049,-0.142051629218673,-0.179254948283826,0.181719008522172,-0.6433087722433,-0.0320655189422828,0.359462016415228,0.0450030752277897,-0.185155774275428,-0.0508049762832542,-0.519572212969001,-0.374095626435686,-0.324404049679652,0.685952337335493,0.156020787374493,0.165216991835093,-0.00797697478735127,0.0653064798803527,0.147221995044254,-0.137299890595856,0.318767616224498,-0.00444328755958923,0.217277950169548,0.0749069417810904,-0.0368235961098456,-0.088442638490495,-0.0921015077548438,0.0600230379708924,-0.0374203577296379,0.101193876792265,-0.201564937540197,0.0559527225879486,0.0512139044897991,0.0693303792210473,-0.6433087722433,-0.190637732490678,-0.486048284784432,0.0753767863887183,0.118712843985135,0.14087557299156,-0.0875181510804982,-0.242944000211664,0.591352257938916,0.125934502460765,0.0996937281443763,0.100412278615282,0.25388476836003,-0.341664650174657,-0.089853488835644,-0.022129316278988,0.0229430391895378,0.174645928330505,0.151143292932595,-0.0310720888333569,-0.281783026352167,-0.0267363825033342,0.245475377736597,0.067406313059198,0.131017621507983,0.00830529889938614,0.167980149626487,0.20002249979053,-0.0805733196467463,-0.207991283136457,0.0657886061930091,0.165785738309191,-0.0434903926751847,0.27350971668231,0.0250715372068726,0.101425072337568,-0.173084562587718,-0.0428462994192951,0.215069502970312,-0.0539047337999353|full_id=C3865_melanoma_CD4_anaplastic_choriocarcinoma_teratocarcinoma_lymphangiectasia_CD8|id=C3865|ontology_enrichment_celltype=CL:0000791!7.94e-11!18;CL:0000789!7.94e-11!18;CL:0002420!7.94e-11!18;CL:0002419!7.94e-11!18;CL:0000790!7.94e-11!18;CL:0000625!1.42e-07!11;CL:0000084!3.21e-07!25;CL:0000827!3.21e-07!25|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000178!7.96e-08!15;UBERON:0000179!7.96e-08!15;UBERON:0000463!7.96e-08!15|tf_chipseq_enrich=ATF3#467;3:22.4631745260087:8.81932387510763e-05:0.00129656723844646!BCLAF1#9774;3:21.6526476101218:9.8473954032885e-05:0.00139224601126851!CCNT2#905;3:6.33620157696263:0.00393075003576489:0.019008362410763!CTCF#10664;3:5.36025637307503:0.006492509252767:0.0279501720465677!CTCFL#140690;3:19.7464743589744:0.000129837200555116:0.00171798649294005!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0325448161711968!E2F4#1874;3:12.6680603152844:0.000491798700629898:0.00437317705364717!E2F6#1876;3:5.01715573169739:0.0079176980688633:0.0322309194190058!EBF1#1879;3:8.906466846569:0.0014152328356098:0.00915431079637386!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.032072100803514!ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0462420658316793!ELK4#2005;3:16.235681658468:0.000233604395574599:0.00255738044752783!ETS1#2113;3:9.72876092220234:0.00108584009258484:0.0076243144701807!FOSL2#2355;3:16.9302006045617:0.000206016205317162:0.00243092604983833!FOXA1#3169;3:11.0814197493855:0.00073475527569867:0.00581385758305124!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.0154163483230192!GATA1#2623;3:13.5603081438004:0.000400961596378263:0.00387956532927084!GATA3#2625;3:27.236516357206:4.94721007899563e-05:0.000851345647454646!GTF2F1#2962;3:12.7396608767577:0.000483552504743859:0.00433938305919779!HMGN3#9324;3:8.17854772335059:0.00182776694216421:0.0108725950716346!IRF1#3659;3:7.6371637535639:0.00224469274729724:0.0128112719730574!MAX#4149;3:6.45255550900712:0.00372191383426551:0.0186567294906098!MXI1#4601;3:9.9615716287593:0.00101147054125902:0.00720333936982959!MYC#4609;3:5.2222818716094:0.00702084375574015:0.0294572513661315!NRF1#4899;3:12.2102794477109:0.000549217240102001:0.00471281729841532!PAX5#5079;3:6.66956553117783:0.00337029099967726:0.0172959472121907!POU2F2#5452;3:9.10612405774252:0.00132416519268213:0.00882374073620423!REST#5978;3:9.65002871612802:0.00111263624711459:0.00767774146101094!RFX5#5993;3:12.0479108271951:0.000571724605031258:0.0048462256330541!SIX5#147912;3:17.086715355459:0.000200406054632501:0.00239777843278311!SMARCB1#6598;3:18.2527157811574:0.00016439776067989:0.00203021612009543!SMC3#9126;3:15.0449328449328:0.000293582542037187:0.00309087370038525!SP1#6667;3:5.6983813781409:0.00540396270171217:0.0246585311343987!SRF#6722;3:13.7971782621678:0.000380661502580019:0.00375161901179151!STAT1#6772;3:20.7065874971992:0.000112599244104667:0.00154876234097818!STAT3#6774;3:10.5194649971542:0.000858918453041531:0.00642721102795762!TCF7L2#6934;3:10.7701765631373:0.000800318129839838:0.0061395934451552!TFAP2A#7020;3:16.518634373045:0.000221803388076634:0.00248284287752793!TFAP2C#7022;3:10.8092286098602:0.000791674657575313:0.00616062212670502!USF1#7391;3:6.36149927720796:0.0038840405729056:0.0190318716990564!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0329490284577162!ZBTB7A#51341;3:7.3519093078759:0.00251625586028227:0.0140239738402273!ZNF143#7702;3:13.5008765522279:0.000406280496299717:0.00389137277632484!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.0109448563256349|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.198118,0.635872,0.563047,0.823736,0.489965,0.335423,0.261644,0.261553,0.446302,0.373681,0.309233,0.49143,0.330703,0.395854,0.061507,0.178727,0.248224,0.271958,0.292154,0.405773,0.39729,0.581713,0.597171,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.647576,0.528324,0.168255,0.370782,0.415647,0.484505,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.155672,0.603208,0.283727,0.314747,0.577664,0.291709,0.448095,0.576651,0.416816,0.292835,0.476744,0.439556,0.0807167,0.57762,0.608919,0.18237,0.126021,0.821217,0.400457,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.155555,0.513852,0.522083,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.421596,0.581837,0.412837,0.671377,0.546839,0.551561,0.0225539,0.218623,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.589326,0.50215,0.294698,0.34331,0.477304,0.289204,0.327108,0.683186,0.278044,0.490301,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.48267,0.420626,0.516462,0.582303,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.546222,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.753577,0.206222,0.525396,0.651524,0.437176,0.269226,0.339277,0.552319,0.281425,0.141758,0.455379,0.520495,0.159617,0.238587,0.372281,0.00252695,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.539392,0.34988,0.475069,0.404569,0.6408,0.630264,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.00643528,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.687347,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.739716,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.226002,0.00217769,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.15663,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.0020598,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.103051,0.36927,0.449036,0.0973145,0.231447,0.544776,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.0863135,0.432035,0.722159,0.390366,0.48809,0.50058,0.443185,0.522904,0.3468,0.60734,0.227104,0.518585,0.617852,0.0135352,0.284625,0.504757,0.55194,0.729153,0.28907,0.164197,0.462688,0.287881,0.574635,0.478174,0.336276,0.468444,0.258219,0.446557,0.243383,0.777351,0.390974,0.73485,0.683217,0.161598,0.751174,0.644754,0.496032,0.476802,0.37357,0.78509,0.477353,0.452741,0.746954,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.78,0.616388,0.408413,0.516511,0.322213,0.0931134,0.33942,0.61031,0.387276,0.522605,0.0248202,0.537348,0.222037,0.416621,0.416292,0.462712,0.734551,0.579431,0.204817,0.452428,0.138871,0.673493,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.523625,0.0980968,0.365487,0.534741,0.39088,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.00604105,0.495883,0.386538,0.508064,0.250964,0.383276,0.457886,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.601877,0.307334,0.459728,0.283463,0.563586,0.472935,0.399569,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.608187,0.387069,0.332774,0.52832,0.299887,0.634365,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.000284685,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,1.84557,0.820209,0.985163,1.94915,0.925331,0.639839,0.667627,1.17594,0.575162,2.00385,0.305559,0.69094,0.242883,0.845342,0.635379,1.7611,1.00973,0.409304,1.96502,2.63304,0.388328,0.795576,1.21459,0.534793,0.439574,0.599922,0.427404,0.596053,0.855276,0.567465,5.3038,0.598234,0.777097,0.259059,0.63803,1.44641,0.726632,0.939121,0.808003,0.69206,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,1.78399,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,1.7986,0.502203,2.41357,1.45054,1.10051,0.414196,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,2.22068,2.26789,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,3.495,0.569121,1.22626,1.27082,1.1798,1.09802,3.17067,1.16312,0.921547,0.743661,1.50815,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,1.05469,0.794219,2.50498,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,2.36206,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,0.698641,1.37083,0.481626,0.941179,1.78371,1.03563,1.51317,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,2.24188,0.936473,2.56478|tfbs_overrepresentation_jaspar=MA0003.1;3.8806,MA0004.1;0.826076,MA0006.1;1.5435,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;1.24048,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;1.58389,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.904546,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.557638,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;1.15625,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.211629,MA0074.1;0.935474,MA0076.1;1.74184,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;1.31954,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;2.36034,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;1.31729,MA0145.1;2.11725,MA0146.1;1.16674,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;2.96208,MA0035.2;0.894194,MA0039.2;0.432958,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;1.60005,MA0104.2;1.2307,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;3.19371,MA0155.1;0.256269,MA0156.1;1.60572,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.8915,MA0163.1;0.387745,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.181755,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0}} | ||
|full_id=C3865_melanoma_CD4_anaplastic_choriocarcinoma_teratocarcinoma_lymphangiectasia_CD8 | |||
|id=C3865 | |||
|ontology_enrichment_celltype=CL:0000791! | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_uberon=UBERON:0000178! | |||
}} |
Latest revision as of 12:34, 17 September 2013
Full id: C3865_melanoma_CD4_anaplastic_choriocarcinoma_teratocarcinoma_lymphangiectasia_CD8
Phase1 CAGE Peaks
Hg19::chr1:151881923..151881943,- | p2@THEM4 |
Hg19::chr1:151881949..151881970,- | p3@THEM4 |
Hg19::chr1:151881977..151882000,- | p1@THEM4 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.94e-11 | 18 |
alpha-beta T cell | 7.94e-11 | 18 |
immature T cell | 7.94e-11 | 18 |
mature T cell | 7.94e-11 | 18 |
immature alpha-beta T cell | 7.94e-11 | 18 |
CD8-positive, alpha-beta T cell | 1.42e-07 | 11 |
T cell | 3.21e-07 | 25 |
pro-T cell | 3.21e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 7.96e-08 | 15 |
haemolymphatic fluid | 7.96e-08 | 15 |
organism substance | 7.96e-08 | 15 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 3.8806 |
MA0004.1 | 0.826076 |
MA0006.1 | 1.5435 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 1.24048 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 1.58389 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.904546 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.557638 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 1.15625 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.211629 |
MA0074.1 | 0.935474 |
MA0076.1 | 1.74184 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 1.31954 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 2.36034 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 1.31729 |
MA0145.1 | 2.11725 |
MA0146.1 | 1.16674 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 2.96208 |
MA0035.2 | 0.894194 |
MA0039.2 | 0.432958 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 1.60005 |
MA0104.2 | 1.2307 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 3.19371 |
MA0155.1 | 0.256269 |
MA0156.1 | 1.60572 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.8915 |
MA0163.1 | 0.387745 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 0.181755 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 1.40979 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
ATF3#467 | 3 | 22.4631745260087 | 8.81932387510763e-05 | 0.00129656723844646 |
BCLAF1#9774 | 3 | 21.6526476101218 | 9.8473954032885e-05 | 0.00139224601126851 |
CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.019008362410763 |
CTCF#10664 | 3 | 5.36025637307503 | 0.006492509252767 | 0.0279501720465677 |
CTCFL#140690 | 3 | 19.7464743589744 | 0.000129837200555116 | 0.00171798649294005 |
E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0325448161711968 |
E2F4#1874 | 3 | 12.6680603152844 | 0.000491798700629898 | 0.00437317705364717 |
E2F6#1876 | 3 | 5.01715573169739 | 0.0079176980688633 | 0.0322309194190058 |
EBF1#1879 | 3 | 8.906466846569 | 0.0014152328356098 | 0.00915431079637386 |
EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.032072100803514 |
ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0462420658316793 |
ELK4#2005 | 3 | 16.235681658468 | 0.000233604395574599 | 0.00255738044752783 |
ETS1#2113 | 3 | 9.72876092220234 | 0.00108584009258484 | 0.0076243144701807 |
FOSL2#2355 | 3 | 16.9302006045617 | 0.000206016205317162 | 0.00243092604983833 |
FOXA1#3169 | 3 | 11.0814197493855 | 0.00073475527569867 | 0.00581385758305124 |
GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.0154163483230192 |
GATA1#2623 | 3 | 13.5603081438004 | 0.000400961596378263 | 0.00387956532927084 |
GATA3#2625 | 3 | 27.236516357206 | 4.94721007899563e-05 | 0.000851345647454646 |
GTF2F1#2962 | 3 | 12.7396608767577 | 0.000483552504743859 | 0.00433938305919779 |
HMGN3#9324 | 3 | 8.17854772335059 | 0.00182776694216421 | 0.0108725950716346 |
IRF1#3659 | 3 | 7.6371637535639 | 0.00224469274729724 | 0.0128112719730574 |
MAX#4149 | 3 | 6.45255550900712 | 0.00372191383426551 | 0.0186567294906098 |
MXI1#4601 | 3 | 9.9615716287593 | 0.00101147054125902 | 0.00720333936982959 |
MYC#4609 | 3 | 5.2222818716094 | 0.00702084375574015 | 0.0294572513661315 |
NRF1#4899 | 3 | 12.2102794477109 | 0.000549217240102001 | 0.00471281729841532 |
PAX5#5079 | 3 | 6.66956553117783 | 0.00337029099967726 | 0.0172959472121907 |
POU2F2#5452 | 3 | 9.10612405774252 | 0.00132416519268213 | 0.00882374073620423 |
REST#5978 | 3 | 9.65002871612802 | 0.00111263624711459 | 0.00767774146101094 |
RFX5#5993 | 3 | 12.0479108271951 | 0.000571724605031258 | 0.0048462256330541 |
SIX5#147912 | 3 | 17.086715355459 | 0.000200406054632501 | 0.00239777843278311 |
SMARCB1#6598 | 3 | 18.2527157811574 | 0.00016439776067989 | 0.00203021612009543 |
SMC3#9126 | 3 | 15.0449328449328 | 0.000293582542037187 | 0.00309087370038525 |
SP1#6667 | 3 | 5.6983813781409 | 0.00540396270171217 | 0.0246585311343987 |
SRF#6722 | 3 | 13.7971782621678 | 0.000380661502580019 | 0.00375161901179151 |
STAT1#6772 | 3 | 20.7065874971992 | 0.000112599244104667 | 0.00154876234097818 |
STAT3#6774 | 3 | 10.5194649971542 | 0.000858918453041531 | 0.00642721102795762 |
TCF7L2#6934 | 3 | 10.7701765631373 | 0.000800318129839838 | 0.0061395934451552 |
TFAP2A#7020 | 3 | 16.518634373045 | 0.000221803388076634 | 0.00248284287752793 |
TFAP2C#7022 | 3 | 10.8092286098602 | 0.000791674657575313 | 0.00616062212670502 |
USF1#7391 | 3 | 6.36149927720796 | 0.0038840405729056 | 0.0190318716990564 |
YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0329490284577162 |
ZBTB7A#51341 | 3 | 7.3519093078759 | 0.00251625586028227 | 0.0140239738402273 |
ZNF143#7702 | 3 | 13.5008765522279 | 0.000406280496299717 | 0.00389137277632484 |
ZNF263#10127 | 3 | 8.22184163701068 | 0.00179904392556587 | 0.0109448563256349 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.