Coexpression cluster:C3607: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.0989073252180581,-0.00582423530937931,0.0358622320896251,0.198759684245717,0,-0.346072636530994,0,0,-0.245293623415694,-0.106230347722948,-0.173652161497886,-0.346072636530994,-0.346072636530994,-0.03036393481942,0.0208504201708193,0.298369983878628,0.371503151340561,0.157844677477499,0.132977030766041,0.193307256877313,0.265965001199878,0,-0.236751980146166,-0.346072636530994,0,0.343468973362619,0.21927132197663,0.246359391946291,0.65708249243269,0.709435418980105,0.431842407519536,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.032404058578668,0.409160564578597,0.491011069590731,0.697998568564939,0.557155511649587,0.637162224521277,0.682670368087867,0.831855191700556,0.750998740902303,0.621614590308009,0.700748486690864,0.64307515561525,0.604396440243365,0.561350065097428,0.52244068526558,0.461519516983287,0.523394809615931,0.46117693965702,0.474417621987159,0.595727709693135,0.165662775662237,0.614000049128688,0.66253858456357,0.567812070898465,0.591048758730103,0.622907277168737,0.522769878302844,0.473962701680155,0.530656030173169,0.440302305346294,0.30086287682405,0.513740153583944,0.430815732477686,0.501444871572389,0.457265708925919,0.476547159419803,0.449663264052159,0.537665762504634,0.379177100905163,0.89641692010292,0.926401643452422,0.715432782961213,0.672444996326738,0.647823511928867,0.457893728453286,0.787790437084599,0.77232164112065,0.819414516340116,0.774853699366954,0.778293280711566,0.75304216607542,0.633230044262894,0.818680524399053,0.637160515093322,0.717512816477759,0.749049447638944,0.624894815488122,0.637183268119772,0.730479183384812,0.561510021321018,0.47380581574737,0.432389573937802,0.592030658547721,0.845417452107667,0.983863571574872,1.02241312059352,0.87519208433208,0.758493895274865,0.947308486592219,1.09513628995936,0.951792400682586,0.946379424588487,1.02028399919256,1.15238853259678,1.13297397022284,1.08233352332494,1.09806512790407,0.931197430992522,1.00996433570209,0.900698133198069,1.14968396645723,1.09099598274565,1.0053438374651,0.98184967858693,1.09982130318336,1.09580915611059,1.09631966290196,1.0935906842484,0.976694161731005,1.01591375654925,1.18168724754088,1.04623248735905,0.93415998005544,0.872238797367216,0.951771814389285,0.822700924141898,0.190241909387483,0.0234032964114082,-0.0458660136942535,-0.0151257536501694,0.0525640696668931,-0.0420292070031355,0,-0.050886180346607,-0.078710012055751,-0.022068756788877,-0.109915131659148,0.135395170318933,-0.346072636530994,-0.266569822589358,1.43597709981105,1.40446018625904,1.29841704403498,0.788741832116499,0.608552305895918,0.738279288768456,-0.103854775961626,0.243935757718306,0,-0.346072636530994,0,0.0627095489654514,0.08641241540732,-0.0377927872415973,-0.0881357394768886,0,0.22204450596088,0.27782532835332,0.0948420448069823,-0.0107273552071647,-0.0883600037808281,-0.242987913902478,-0.17989040570992,-0.124581582242939,0,0,-0.330480188409746,0.214504455524283,0.538747185121177,-0.346072636530994,-0.0463597006048036,-0.158079854259706,0,-0.0141705112785683,-0.0313618606615501,0.0823914483034935,0.375734668239733,0,-0.0523527959707693,0.114216077061098,0.0657521671341522,-0.158819846280626,-0.0131593688064538,-0.0222562563613581,-0.0590595688946712,0.112584671963709,0.0509085745680694,-0.000994164204350279,-0.0885465181413921,0.00881476987510021,0.159230055823655,0.0503156775564332,0.124926859948301,-0.00602475173019595,-0.105074153879457,0.398283475876426,0.567008728507526,-0.138324683309605,-0.249080275288389,0,-0.245484949709794,0,-0.184490781433669,0.0855295617988701,0.261342044397734,0,0,0.422647990942883,0,0.208363359630569,0,0,-0.23117398555497,0,-0.0423261982954329,-0.224416912269807,0.287109364766367,0.0360397917185937,0,-0.346072636530994,-0.241330854576135,-0.346072636530994,-0.296089957344034,-0.258159420954894,-0.216195333027983,-0.303236918697369,-0.305823377956607,-0.346072636530994,0.26977126253741,0.221382697609602,0.494458801748155,0,0,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,0.370536060179467,0.0765657912491811,0,-0.346072636530994,-0.0487877650452144,-0.00730153020106011,0.366308867229522,-0.346072636530994,0,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.329755814896883,-0.22359190127387,0.565852611097245,0,-0.255510997603236,0.113099497616145,0.33487367994263,0.231179324656064,0.0556781658668878,-0.346072636530994,-0.346072636530994,0.786093115785092,1.09235075086471,1.00710315437503,-0.346072636530994,-0.346072636530994,-0.288492069964163,-0.346072636530994,-0.346072636530994,-0.262596655776744,0.523430261941894,0.84430898690043,0.740134745661739,0.785495858046902,0.699226657853676,0.476834722337869,0.851980439117122,1.00496662701781,0.634095431086718,0.714846255230195,0.824651903372432,0.564428409284175,0.410525862352368,0,0.256732585265982,0.0833655469922225,0.838796388219204,0.372139461813531,0.0530649014035296,0.211381743918095,0.340394762467028,0.180450844829388,0.594754675631197,-0.288034767749743,0,0.194221919372297,0.52984037980829,-0.03090535623197,0.291921616591483,-0.231648693683659,-0.346072636530994,0,0.789442314714246,0.899349484452205,0.974666297046879,-0.346072636530994,-0.0139131522699242,0.182230498290025,0.187038281075934,0.109710521778449,0.400725115661253,0.748492282859036,0.775024341691679,0.892239137569164,0.80286886093506,-0.346072636530994,-0.346072636530994,-0.0972931623058096,-0.278047141248396,-0.346072636530994,0.165412470498092,0.255075965064649,0.271298243341085,-0.209962896406022,0.131147348772353,0.116153880920404,-0.135509989120253,-0.271004597099926,0.0577237147452911,0.0134888248008741,0.0444986202910761,0,-0.0950320489843684,-0.346072636530994,0.0786983742888787,0,0.609511575639335,0.185662179125477,0.746375749875235,0.748498149805195,0.850246107644399,-0.346072636530994,0,-0.231331485755729,-0.0466892958696958,0,0.0684301414591756,0.115830153095435,0.0579261842853258,-0.0185139832387408,-0.346072636530994,0.116701507069865,0.0972869418536211,0.260169471069412,0.262490228825251,0.436989226108045,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.00688851992324835,0.245769790509461,0.0069839983236602,-0.0318065484087456,-0.155528093027254,0.121900950388825,0,-0.226600681198896,0.169094597125265,0.0269772960068896,0.429615422054084,0.76907715543836,0.334557455790567,0.296603605547011,-0.0466757011335563,-0.140832617040757,0.0422205416471045,-0.126545837616385,-0.245207604412978,-0.346072636530994,0,-0.223732749764787,0.0813768443325499,-0.346072636530994,-0.346072636530994,-0.0713973498813881,-0.186039188299121,0,0,-0.137579020502609,-0.0866201652760656,-0.0531883904557536,0.136941591783939,0.043123038967571,0.068354073672271,-0.160192862186552,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.133985039635855,0,-0.195079584330286,0.219072472699016,-0.346072636530994,-0.346072636530994,-0.149482107532505,0.334122726744411,0.305222213022621,0.398388948696429,0.205252656265557,0.150814816562255,-0.346072636530994,0,0,0.105352457754613,0,0.104121385918821,-0.346072636530994,0.294415523495724,0.123828127762991,0,0.577974460846188,0.0019398465062927,0.0273202470625879,0.395891983949827,0,-0.346072636530994,-0.0726310925419664,0.404451515606246,0.126345056197774,0.619169240977809,0.266524219443616,0.178178167015863,0.0886457263343833,0.153817651421127,0.617877274390192,0.0918063851098252,-0.19310729909942,-0.105147802998574,-0.0734460791361887,0.233651270431729,-0.346072636530994,-0.034210944370663,-0.346072636530994,0.108034143853115,-0.190583143269764,0.0253591604213492,-0.0703328879892258,-0.120488094947919,0.80602108319516,0.749778426808574,0.924559079746864,0.884823091821906,0.925503614981736,0.756790335118496,0.763866546240838,0.859926439699412,-0.191558501278043,-0.346072636530994,-0.346072636530994,0.137229487140467,0.0764347303276746,0.214102881153228,0.204256065327347,0.385576246604894,0.561885255851024,0.436997440442517,0.397805977888354,0.165326373113884,0.535814261049824,0.217830462021672,0.544854617045292,0.436894097381146,0.29670612994801,0.571159158096102,0.408605012241781,0.578172440073104,0.320849183982317,0.164038006666962,0.4202379541443,0.39410786174796,0.066112693288186,-0.0550639495795247,0.300339808927601,0.198265530266947,0.502221835912093,-0.346072636530994,0.49944927583022,-0.346072636530994,0.256960318818982,-0.0783358853605365,-0.310557255620894,-0.233144487068613,-0.346072636530994,-0.0463153259674562,0.0571597974145305,-0.346072636530994,0.174470236593647,-0.346072636530994,0.0789089986057754,0.677496948684607,-0.346072636530994,-0.346072636530994,0.417378375001537,0.00388555886990721,-0.346072636530994,-0.346072636530994,0.70436309117284,0.0240993062903885,0.709540079748756,-0.0215083103365619,-0.0517535341136104,0,0,-0.346072636530994,-0.346072636530994,0.187525428403152,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.070590504023198,0.173230464021951,-0.00113704512461116,-0.0971056008286492,-0.127849293888194,0.0580248538987523,-0.346072636530994,-0.346072636530994,-0.0122412546722225,-0.346072636530994,-0.313434817547132,-0.346072636530994,-0.346072636530994,-0.131758124131238,0,0,1.02467216799034,0.15876828418947,0.215347788749719,-0.124241114763126,0,-0.138931771338536,0,0.413193405889483,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,0.0101355751173533,0.000683201692868007,-0.00640568862997742,0.181015047189406,0.292645576972905,0.0283276594447047,0.0122946274072577,-0.0589300605093986,0.0113253964864254,-0.346072636530994,-0.346072636530994,-0.259094185799498,0.262015875654969,-0.230105264266993,0.259550828151062,-0.346072636530994,-0.346072636530994,-0.124748691061132,-0.182912174075222,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.183036259945092,-0.334616553643306,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.0402022792589852,-0.346072636530994,0.00839457191556159,0.193850469422134,0.217578459794601,-0.100626709244771,-0.346072636530994,-0.346072636530994,0.0865157116864313,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,0.100317862225769,0.439958872891686,0,0.145722971627814,0.0813638744119434,0.10621737938268,0.184339387698831,0.0110051978355409,-0.0441440663895667,0.0874873383132558,-0.0462740100341047,0,-0.346072636530994,-0.227103050501588,-0.250119968259579,-0.299867226777691,-0.346072636530994,0.221525021147464,0,0.16747862717146,-0.232614763030573,-0.346072636530994,-0.346072636530994,0.337384729293218,0.403766903472718,0.0256128589246175,-0.346072636530994,0.00820704936408889,-0.0598438111941013,-0.346072636530994,0.14177094190086,-0.346072636530994,0.314173827872421,0.129057294497286,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.173930379883381,-0.00509022071410925,0.046616925903038,0.037153962196367,0.0203631885325765,0.0998759650431728,0.147486012445523,-0.346072636530994,-0.346072636530994,0.401483555349166,0.114291652325438,0.523641546195365,0.711573937304451,0.57361358528974,0.189961807617848,-0.346072636530994,-0.214886685827707,-0.00488049428739418,-0.120455702314157,-0.222916216945343,-0.346072636530994,-0.127981601400371,-0.135386194460553,0.0512262229954782,-0.0142773293827853,0.097169195120605,0.0717085760899133,-0.346072636530994,-0.346072636530994,0.202087331939945,0.087343859713561,0.0917604244830311,-0.346072636530994,-0.346072636530994,0.220551786211193,0.176765415872304,0.161678485541836,0.0860347503274138,0.132860648919509,0.0404468200875667,-0.256577272710763,0.1879147089447,0.00374515647750517,0.297446013135549,0.351367626113221,0.214364854066169,0.342487233707856,0.00497317335243946,0.276151810900994,0.710408920249065,0.0254234840901051,0.531771955196894,0.135993561624051,0.463854542852555,0.279478169607916,0.471387294322386,0.486749546915418,0.0736023614789025,0.208243920704098,0.236693415785752,-0.346072636530994,0,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.0517336581668014,-0.259967744042937,0,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.0562408777463757,0.63501414508531,0.788173335053515,0.681291580464384,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.636174077258304,0.618435106582453,0.106844435183627,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,0,-0.346072636530994,-0.214878870031996,0.262715902572289,-0.0390758745518174,0,0.0682886919779582,-0.085890193850252,-0.305909791320052,-0.0139649837407086,0.0713586074934768,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.0998784169290889,-0.346072636530994,-0.258083873111165,0.031493427513643,-0.323741096510746,-0.0952833941957483,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.020030739351393,-0.0953896732421492,-0.0378425593717988,0.0267031128419265,-0.21405574781587,0,0.0498883125597421,-0.333179219576376,-0.346072636530994,0,0,-0.346072636530994,-0.314460108546542,0.159420353662981,0.317748636249541,-0.275470731839155,-0.128548802443815,-0.109661220478958,-0.346072636530994,-0.346072636530994,0.0633281735501667,-0.13429491181195,-0.346072636530994,0.0476819490156144,-0.346072636530994,-0.176471172458901,0.0264811722903117,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.090387418558975,-0.346072636530994,-0.346072636530994,-0.346072636530994,0.0886414501174759,0.0377398596447714,0.112519122673569,-0.13712521424087,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.230133831200316,-0.346072636530994,0,-0.0353234409382867,0,-0.0131103285275496,-0.346072636530994,-0.346072636530994,-0.297273564634947,-0.346072636530994,-0.346072636530994,-0.231486440769621,0.146291247192322,0.126250185770964,-0.346072636530994,-0.106661790728764,-0.346072636530994,-0.00804451216174484,-0.0634548335454116,0,0.0681588064684956,0.560091992537129,0.561432157465816,0.545799116085579,-0.346072636530994,-0.346072636530994,-0.346072636530994,-0.107942095623145,0.278323432087205,0.0581752393062885,-0.346072636530994,0.0277905532726557,-0.188812149072126,0.268853338840243,0,-0.181073095670806,0,-0.346072636530994,-0.346072636530994,-0.127792520118117,0.0570191217472061,-0.0303395139838465,0,-0.346072636530994,-0.0651883696118105,-0.147328362965968,-0.141285052641989,0,0.149796234835486,-0.112012844641393,0.715681041315803,0.634671839720205,-0.346072636530994,-0.023284776100983,-0.19863303547466,0.0168432542464229,-0.0392831897662848,0.633493764889706,0.133095135155278,0.0793477432570552,-0.346072636530994,-0.346072636530994,-0.346072636530994,0,0,0.0500863030838633,-0.0570513391278423,0,0.656409662762669,0.75224102892199|full_id=C3607_Dendritic_CD8_CD4_Macrophage_Monocytederived_chronic_Melanocyte|gostat_on_coexpression_clusters=GO:0005031!tumor necrosis factor receptor activity!0.0147160534274282!8764$GO:0043120!tumor necrosis factor binding!0.0147160534274282!8764$GO:0005035!death receptor activity!0.0147160534274282!8764$GO:0005887!integral to plasma membrane!0.0213323094237266!51393;8764$GO:0031226!intrinsic to plasma membrane!0.0213323094237266!51393;8764$GO:0009266!response to temperature stimulus!0.0213323094237266!51393$GO:0044459!plasma membrane part!0.0406706632532928!51393;8764$GO:0048770!pigment granule!0.0406706632532928!51393$GO:0042470!melanosome!0.0406706632532928!51393$GO:0019955!cytokine binding!0.0436494179313354!8764$GO:0005262!calcium channel activity!0.0476836500583188!51393|id=C3607|ontology_enrichment_celltype=CL:0000037!4.71e-59!168;CL:0000566!4.71e-59!168;CL:0000988!8.66e-59!177;CL:0000738!1.41e-55!136;CL:0002032!2.26e-55!161;CL:0000837!2.26e-55!161;CL:0002087!6.60e-47!115;CL:0002031!7.04e-47!120;CL:0002320!1.43e-34!361;CL:0000134!4.59e-34!354;CL:0000048!4.43e-33!427;CL:0000763!4.08e-32!108;CL:0000049!4.08e-32!108;CL:0000723!1.92e-30!433;CL:0000034!4.07e-30!441;CL:0000219!8.93e-29!386;CL:0000766!5.14e-28!72;CL:0000557!8.71e-27!67;CL:0000839!1.41e-24!66;CL:0002009!4.48e-24!61;CL:0002194!1.26e-23!59;CL:0000576!1.26e-23!59;CL:0000040!1.26e-23!59;CL:0000559!1.26e-23!59;CL:0000838!1.35e-20!52;CL:0000542!1.44e-20!53;CL:0000051!1.44e-20!53;CL:0000473!1.15e-19!48;CL:0000234!1.15e-19!48;CL:0002242!3.68e-19!55;CL:0000860!3.45e-16!42;CL:0002057!3.45e-16!42;CL:0000084!4.54e-13!25;CL:0000827!4.54e-13!25;CL:0000791!3.14e-12!18;CL:0000789!3.14e-12!18;CL:0002420!3.14e-12!18;CL:0002419!3.14e-12!18;CL:0000790!3.14e-12!18;CL:0002371!4.43e-10!588;CL:0000325!5.66e-10!87;CL:0000625!1.88e-08!11;CL:0000945!1.45e-07!24;CL:0000826!1.45e-07!24|ontology_enrichment_disease=DOID:2531!7.89e-08!51;DOID:0060083!7.89e-08!51|ontology_enrichment_uberon=UBERON:0002193!3.36e-37!108;UBERON:0002390!1.03e-36!98;UBERON:0003061!1.03e-36!98;UBERON:0002384!3.30e-32!371;UBERON:0002405!1.44e-30!93;UBERON:0002371!6.69e-27!76;UBERON:0003081!1.42e-22!203;UBERON:0001474!8.70e-22!82;UBERON:0004765!1.10e-18!90;UBERON:0001434!3.63e-15!100;UBERON:0002204!8.63e-13!167;UBERON:0000926!9.31e-13!315;UBERON:0004120!9.31e-13!315;UBERON:0006603!9.31e-13!315;UBERON:0000178!2.56e-07!15;UBERON:0000179!2.56e-07!15;UBERON:0000463!2.56e-07!15|tf_chipseq_enrich=EGR1#1958;3:4.98817909481014:0.00805648813738344:0.0320135283103219|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.324808,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.0693924,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.21992,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.0641358,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.000469121,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.0802194,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.21774,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.0691572,0.268011,0.563047,0.252249,0.807281,0.335423,0.629514,0.261553,0.446302,0.373681,0.309233,0.49143,0.330703,0.395854,0.329568,0.53472,0.615744,0.271958,0.292154,0.405773,0.39729,0.581713,0.230901,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.647576,0.528324,0.168255,0.370782,0.415647,0.142924,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.603208,0.283727,0.314747,0.577664,0.291709,0.448095,0.576651,0.416816,0.292835,0.476744,0.439556,0.373868,0.57762,0.241757,0.18237,0.346458,0.0964442,0.400457,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.503058,0.513852,0.522083,0.248634,0.281576,0.0271848,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.176034,0.581837,0.412837,0.671377,0.546839,0.551561,0.448039,0.218623,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.28275,0.589326,0.50215,0.294698,0.34331,0.477304,0.289204,0.327108,0.109738,0.278044,0.490301,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.48267,0.420626,0.516462,0.858756,0.335105,0.144809,0.145539,0.0134194,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.546222,0.293698,0.284593,0.343734,0.306556,0.305777,0.601433,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.0965765,0.41707,0.363685,0.464871,0.166672,0.206222,0.525396,0.651524,0.437176,0.269226,0.339277,0.552319,0.281425,0.141758,0.455379,0.168058,0.159617,0.238587,0.0799758,0.232251,0.189515,0.0891382,0.0595618,0.171389,0.625309,0.347298,0.539392,0.34988,0.475069,0.404569,0.273024,0.262389,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.0129363,0.0179103,0.303939,0.279795,0.0886747,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.0694567,0.02609,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.00681584,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.739716,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.188967,0.057571,0.047591,0.0899568,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.43617,0.145116,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,0.252227,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.0210246,0.432035,0.722159,0.390366,0.48809,0.50058,0.443185,0.522904,0.158867,0.0572701,0.227104,0.518585,0.617852,0.38649,0.284625,0.504757,0.55194,0.729153,0.28907,0.164197,0.462688,0.287881,0.0556235,0.478174,0.336276,0.468444,0.258219,0.446557,0.243383,0.00448654,0.390974,0.73485,0.683217,0.161598,0.164332,0.644754,0.496032,0.0795555,0.37357,0.00500957,0.000560517,0.78384,0.399222,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.0104921,0.0997241,0.0961477,0.314438,0.0720718,0.163828,0.230581,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.0674279,0.0165273,0.01635,0.516511,0.322213,0.0931134,0.33942,0.61031,0.387276,0.522605,0.0816402,0.537348,0.222037,0.416621,0.416292,0.0252635,0.734551,0.579431,0.204817,0.452428,0.138871,0.673493,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.0805711,0.170369,0.408861,0.0768488,0.534741,0.39088,0.0109626,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.303709,0.495883,0.0135408,0.159081,0.250964,0.0851927,0.457886,0.504711,0.220231,0.509064,0.196976,0.019637,0.463751,0.601877,0.307334,0.459728,0.283463,0.563586,0.472935,0.399569,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.608187,0.387069,0.332774,0.52832,0.299887,0.266492,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.0358457,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.0352561,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.0445413,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.221898,0.820209,2.25583,1.11328,0.925331,0.639839,0.667627,1.17594,0.575162,1.14835,0.824321,0.69094,0.680949,0.845342,0.635379,1.7611,1.00973,0.409304,0.842925,0.645155,1.00813,0.795576,1.21459,0.534793,1.11965,0.599922,0.137917,0.596053,0.855276,0.567465,0.469078,0.598234,0.777097,1.32383,0.63803,0.461452,0.726632,0.939121,0.808003,0.69206,0.645308,1.02504,0.951993,0.893117,1.29475,1.45259,0.928548,0.650353,0.892517,1.0078,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,1.25415,0.333216,1.45054,0.430728,1.06461,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,0.169933,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,1.05469,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,0.250511,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,0.951408|tfbs_overrepresentation_jaspar=MA0003.1;0.708947,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.377374,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.904546,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;1.59304,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;1.15625,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;1.04561,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;1.79391,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;1.93651,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;1.55947,MA0103.1;1.52002,MA0105.1;1.5295,MA0106.1;0.986396,MA0107.1;1.36919,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;1.37817,MA0146.1;1.70974,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;3.37171,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;0.491226,MA0047.2;0.973066,MA0112.2;0.731309,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;1.51687,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;1.38935,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.149099,MA0163.1;0.387745,MA0164.1;1.01792,MA0080.2;1.55139,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.941469,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
| | |||
}} |
Latest revision as of 12:29, 17 September 2013
Full id: C3607_Dendritic_CD8_CD4_Macrophage_Monocytederived_chronic_Melanocyte
Phase1 CAGE Peaks
Hg19::chr17:16319065..16319082,+ | p4@TRPV2 |
Hg19::chr17:16319083..16319126,+ | p2@TRPV2 |
Hg19::chr1:2487631..2487646,+ | p7@TNFRSF14 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
GO ID | GO name | FDR corrected p-value |
---|---|---|
GO:0005031 | tumor necrosis factor receptor activity | 0.0147160534274282 |
GO:0043120 | tumor necrosis factor binding | 0.0147160534274282 |
GO:0005035 | death receptor activity | 0.0147160534274282 |
GO:0005887 | integral to plasma membrane | 0.0213323094237266 |
GO:0031226 | intrinsic to plasma membrane | 0.0213323094237266 |
GO:0009266 | response to temperature stimulus | 0.0213323094237266 |
GO:0044459 | plasma membrane part | 0.0406706632532928 |
GO:0048770 | pigment granule | 0.0406706632532928 |
GO:0042470 | melanosome | 0.0406706632532928 |
GO:0019955 | cytokine binding | 0.0436494179313354 |
GO:0005262 | calcium channel activity | 0.0476836500583188 |
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.36e-37 | 108 |
hematopoietic system | 1.03e-36 | 98 |
blood island | 1.03e-36 | 98 |
connective tissue | 3.30e-32 | 371 |
immune system | 1.44e-30 | 93 |
bone marrow | 6.69e-27 | 76 |
lateral plate mesoderm | 1.42e-22 | 203 |
bone element | 8.70e-22 | 82 |
skeletal element | 1.10e-18 | 90 |
skeletal system | 3.63e-15 | 100 |
musculoskeletal system | 8.63e-13 | 167 |
mesoderm | 9.31e-13 | 315 |
mesoderm-derived structure | 9.31e-13 | 315 |
presumptive mesoderm | 9.31e-13 | 315 |
blood | 2.56e-07 | 15 |
haemolymphatic fluid | 2.56e-07 | 15 |
organism substance | 2.56e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.89e-08 | 51 |
immune system cancer | 7.89e-08 | 51 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.708947 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 0.377374 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.904546 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.190716 |
MA0056.1 | 0 |
MA0057.1 | 1.59304 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 1.15625 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 1.04561 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 1.79391 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 1.93651 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 1.55947 |
MA0103.1 | 1.52002 |
MA0105.1 | 1.5295 |
MA0106.1 | 0.986396 |
MA0107.1 | 1.36919 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 1.37817 |
MA0146.1 | 1.70974 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 3.37171 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 0.491226 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.731309 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 1.51687 |
MA0155.1 | 0.256269 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 1.38935 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.149099 |
MA0163.1 | 0.387745 |
MA0164.1 | 1.01792 |
MA0080.2 | 1.55139 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 0.941469 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 0.575594 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.0320135283103219 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.