Coexpression cluster:C972: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (6 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.145576832326476,-0.174863717322472,-0.147240743146884,-0.343933756756811,-0.249175168342826,-0.187524527301541,-0.500587082011506,-0.313727316901477,-0.295590160882742,-0.484932421735335,-0.630325961937194,-0.271930849024352,-0.515903263627992,-0.221239605278057,-0.219391286199911,-0.213906988144577,-0.254616575205526,-0.199788257040107,-0.257136109434878,-0.323786960989077,-0.390170220855171,-0.459096989591395,-0.0405701603195325,-0.0372487013961138,-0.0251431596314583,0.152495321180887,0.138842043982071,0.13758801912809,0.223631342524959,0.412692347684639,0.297413110854672,-0.261785637115215,-0.278171606159994,-0.36936518456828,0.168997624978184,0.235324723641238,0.229288373420333,0.39064431042414,0.403285835452016,0.406082404051247,0.131941792610128,0.192895373407286,0.177101562100393,0.168110378174876,0.24094109665153,0.321112961820298,0.176629350552366,0.203456869357328,0.168566538991026,0.0890654313549387,0.211503777142246,0.153161247460414,0.216874162753627,0.349090531469062,0.22481007218724,0.147075695676995,0.212269203265109,0.161492413275547,0.204697117689841,0.286909909965293,0.339107287012872,0.161628104118807,0.179930232627305,0.25321198505476,0.156142661740282,0.164100282373202,0.155333112415672,0.175922325596091,0.170963804350802,0.193921099821738,0.170035822065115,0.241823053363665,0.215659965301819,0.188437512223561,0.152251196014094,0.189597176049125,0.277199115946903,0.216798531088396,0.289382768022462,0.261204479050107,0.264702480779106,0.244161220891271,0.318004731676828,0.294799440998808,0.305450614174419,0.390327282745717,0.277553375444875,0.277719228571865,0.234742087569332,0.338044279453999,0.546996904384089,0.530628757141469,0.530570271215319,0.341748942316478,0.361552775256619,0.099651889296697,0.567214830451854,0.548917192100902,0.486537139751171,0.325212477079693,0.484964738007891,0.439978840691073,0.466829135038781,0.252006095647253,0.380382742197652,0.368244492885656,0.433084525957639,0.203738793195682,0.246926995436341,0.26355715701365,0.260165014924109,0.350453304996636,0.495627048483334,0.523358008152344,0.518357187888116,0.286619743295316,0.404423653657352,0.379640873951608,0.450187622531901,0.350300301272681,0.305829834846347,0.333687484596271,0.389514745524455,0.395030232029277,0.474183068970383,0.315222511918502,0.307849861296438,0.494852478423895,0.494229398322496,0.503461875816038,-0.0289502105009195,-0.215301337739654,-0.237259454000393,-0.177908200967418,-0.196094839217195,-0.235887510701656,-0.0895205064024343,-0.162975202517129,-0.0594295658983515,-0.070392843014066,-0.0642462429328425,-0.014093655403125,-0.498596906347586,-0.428520124780368,0.0849533117256086,0.087994317543309,-0.0307251565156899,0.354491142825715,0.335729938572149,0.400319703730129,-0.194897069478393,-0.345351829984618,-0.334355072514699,-0.150180184614196,-0.333008253593421,-0.233885527634343,-0.236838270470685,0.00577840850467504,0.0164750280463334,0.031069180633202,-0.536517808944535,-0.352637229126352,-0.341931281198159,-0.0946435648705864,-0.352173036646436,0.0231917153004975,0.0144330831092981,0.0402828947172381,-0.185152191021536,-0.167572561517844,-0.260519009186549,0.491236588843475,0.425280511650937,-0.569948365010581,-0.180379180575129,-0.124255388026025,0.289777202641256,0.30320934707524,-0.105744428338264,-0.265886647212882,-0.170685246460438,-0.318945401356574,0.087781458028796,-0.0741694664249846,-0.0575073406775766,-0.254420664969229,-0.129422998293248,-0.482806649058485,-0.191990725492598,-0.247874192973542,-0.228306361418966,-0.0571362668258738,-0.0336362620313157,-0.0514939837298169,0.00880936356921935,-0.112568570312412,-0.0270629176715544,-0.124707726673197,-0.0724141237178723,-0.382472242220899,-0.65777420799849,-0.00651302976125345,0.00539470373226814,0.103826166685187,-0.101115427025613,-0.154409516393948,-0.0477658890406359,-0.299685720871123,0.312940129797537,-0.0783736432983365,-0.0310280315528013,0.228390674847352,-0.0724763908083911,0.275670442404049,-0.145122202747452,0.311543268139318,-0.115553778066144,0.319084721049545,-0.0412006656256335,-0.0443789134841227,0.277348303090089,-0.167945484816058,-0.248335730013698,-0.105851057042848,-0.0327119553091416,-0.0359391868696066,0.0320886494088226,0.0358495002064086,0.0193065180629939,-0.00762772657080822,-0.0473374703915,0.11973677831672,-0.244462918194169,-0.168185460899956,-0.27431504960033,-0.178985880831061,-0.407543177290707,-0.189138581704748,-0.138877284251795,-0.183485072791615,-0.18822365020008,-0.200098342476929,-0.168527904701975,-0.249616383576483,-0.182810252513108,-0.217826081072033,-0.344543794024615,-0.524664875687896,-0.593858730745752,-0.45447481989351,0.0952916622247355,0.0930994106760328,0.0990771633314545,0.375855412016753,-0.006872395118507,-0.222961332025734,-0.140144817320508,-0.350802440126534,-0.204265712407419,-0.181804410499883,-0.360121648605541,-0.561807032233133,-0.217033519878285,-0.160667818287098,-0.126291539243681,-0.2504302373524,-0.330426836814437,-0.177747720813201,-0.0531776862022676,-0.0697873442727838,0.112631935258338,-0.0321194416110267,-0.0216420746979902,-0.1644270899697,-0.159675987826615,-0.199655479971458,-0.126535355810477,-0.118285455188508,-0.256775901875788,0.31141078239665,0.09037764137542,0.357946779716956,0.340721396466103,0.366229541629001,-0.0799124968415824,-0.170019655447626,-0.188291991350381,-0.214736728280834,-0.133409972551567,-0.144308954156056,-0.0207294213284622,-0.228020495675704,-0.278072051464213,-0.0782908857795247,-0.0319951083757586,-0.15402562351317,-0.186246424901647,-0.0919053556212901,-0.128982310910083,-0.399963151601004,-0.497487295792688,-0.381618766811729,-0.105410120612032,-0.395972539781347,-0.382874699047784,-0.250731838869992,-0.182449395504846,-0.275078219597027,-0.218243121845336,-0.230932948138578,-0.18285978521436,-0.199335843714317,-0.0459544640830795,-0.134460071968572,-0.152332162197663,-0.154556633129855,0.0460698117247722,-0.041086432314001,-0.0424315796425283,-0.0543110319812131,0.0097533694099565,0.512193768987079,0.486192454531163,0.499295720904686,0.0909513089187011,0.142925664361831,-0.067332810189432,-0.019679560207475,-0.0410925303998092,0.459082740526528,0.440623679994496,0.52020332503895,-0.167157996959712,-0.343309868484214,-0.281847765372925,-0.107855358048764,-0.178256624855515,-0.118641849428442,-0.0626774370409046,-0.2010070392034,-0.29768938282699,-0.284739952469115,-0.0502039050587059,-0.180723388350843,-0.0617314889820755,-0.523683838117927,-0.551125300991844,0.461817800658583,0.436398234310791,0.410126910290046,-0.29339414204021,-0.319034375784003,-0.403357839190074,-0.120063557193013,0.244237409953961,-0.281530109208142,-0.12467751382542,-0.08175133225639,-0.114684231997982,-0.359346749733761,-0.150863578277897,-0.236145126947897,-0.0830825012021616,-0.076230316026327,-0.235380392397278,-0.0180642016578931,-0.161950034417432,0.0101502079493777,-0.13313049332831,-0.152272005041363,-0.203862730892279,-0.512592017893923,-0.154278228267963,-0.23191476155973,-0.468791098013781,-0.0962971040039592,-0.384260959196302,-0.413304732041711,-0.178406480882879,-0.444596029130677,-0.494080458667294,-0.498180787196872,-0.275032268923499,-0.350979681414191,-0.425209334537194,0.0976742819992597,0.104377612747093,-0.298700641551822,-0.393374816488087,-0.0181728073212218,0.176062174554977,0.100745906340155,0.169678652031305,-0.275269310607329,-0.277090750277053,-0.198671708996227,-0.105329949106949,-0.106895893063785,-0.0837897235643798,-0.0623563900726914,-0.0138170519547579,-0.0586998304970137,-0.0537621794469728,-0.170027486758518,-0.0703139904487441,-0.0760106609922015,0.450502619875404,0.0426584955953263,-0.408389829621774,0.221978693836744,-0.190159778296027,-0.226813421885592,-0.390142558538363,-0.208079727174364,-0.230983259944622,-0.113653305962555,-0.088279315592777,-0.0027285877705181,-0.0695849605944666,-0.622816239928696,-0.109006193377499,-0.168399768530231,-0.317680936449356,-0.0466769851278303,-0.0893884823855943,-0.0726632389609859,-0.394491236718474,-0.406996899659752,-0.242379278550525,-0.514908624164327,-0.220385317558706,-0.425249750058671,-0.0667589249314116,-0.123405043186049,-0.292026455986562,-0.250771293085692,-0.32665585783715,-0.200748650899477,-0.554540716692773,-0.197217564768782,-0.34751121563923,-0.276752772661154,-0.376230302219339,-0.130607217935957,-0.228969761026955,-0.373373601029941,-0.152257921987195,-0.234006332659859,-0.178426759402542,-0.449065190134876,-0.311478505488451,-0.217913544883135,-0.205065887365765,-0.305802971822794,0.131692412234149,-0.59626176686243,-0.545459142898477,-0.393162169253792,-0.163586021308886,0.222977194712215,0.201436426731189,0.190309380478182,0.273617482000874,0.269647711117554,0.255658708395861,0.224851620021224,0.232198613112082,-0.0199704344327023,0.166183718163216,0.034612868715941,0.106187305760055,0.174965743379415,0.324532494434868,0.0412234297703432,0.0994165014116434,0.155825511802877,0.13456257571522,0.0669068751813005,0.0363797053678987,0.160597061752348,0.0838912873619669,0.51554750527968,0.0626995929779876,0.118218360164456,0.14160673824246,0.224921054691731,0.0925614230367283,0.0501364034939364,0.113154270460226,-0.00387341230582259,0.0217384655310728,0.0394804200118949,0.244291568702952,0.0558745974750538,0.235130310061986,0.149197990340378,0.0200859662102665,0.120056025787394,-0.0251056040833302,0.18358403307842,-0.122933574512784,0.0711774548910314,-0.00868783912382785,-0.00982240664164148,0.0048406475192665,0.0857363042258087,0.0688761119977463,0.0096183372488141,0.219080022581892,-0.00466095169756755,0.36585740303243,0.186485246078329,0.12066835508881,0.257282281521004,-0.178113825302229,0.0163674453337543,0.0845777565964869,0.0988189378381824,0.161439163669321,0.0823351013824255,0.086308917892374,-0.0344423383481793,-0.0182701830451785,0.0700442577399401,0.0915328035551746,0.126087802314305,0.0778447347476886,-0.06701872370569,-0.106907201665627,-0.0707209579209069,0.114034133320353,0.0189740064529795,0.164227930421632,0.135000017417556,0.0987944055039653,0.45513353996151,0.365945689486554,0.201840655959895,0.139015818940832,0.0413438927868339,0.0396173353818281,0.171835974839605,-0.036951317253828,0.103010992753236,0.01248596311877,-0.0713749952619341,-0.0027341677165178,-0.0794504808398149,-0.0480420254872035,-0.0141386807331994,0.0448722375977219,0.141962132748272,0.106295636969298,0.115329746315392,0.127823123264069,0.145893610222824,0.179291758938724,-0.0372627311582399,-0.0554872393308345,-0.030739633049976,0.1656686870442,0.0804467414781627,0.168335966914694,0.19173938167736,0.362776039242433,0.136931270550962,0.16860945758387,0.014120763646749,-0.0182406690757122,0.0137979133734324,0.134436897590366,0.0495930901208917,0.0543290208125391,0.165969174510339,0.206548259478758,0.156372346718139,0.0823240632394507,0.280557272793983,0.052495196624799,0.151366093776953,0.0461095742209809,0.127695597190252,0.111376136744543,-0.0272330487163547,0.0013566252709054,-0.101010982786912,0.11445246576649,0.073497512458821,0.200795466623146,0.0377184554341318,0.0590009096861964,0.0981515471902692,0.0680615743184302,0.095548182632472,0.111845141647985,-0.021214561186412,0.0152874802410356,0.0923302826558675,0.127433391702704,0.0872635755273206,0.146127849799963,0.135295681316994,-0.0159915818875017,0.088477386168355,0.0367831352497536,0.143663027352964,0.0592573016590957,0.127493324110932,-0.0062064799916617,-0.0142869213508551,-0.013558443090028,-0.0482231732309938,0.135966297841909,0.142242009589598,0.164872148303947,0.902700237378218,0.0516818393293513,0.0882777377433788,0.155375306544,0.0857659297094054,0.206296045092505,-0.139539826803581,-0.16196076765981,-0.00708756415075682,0.0849635113729035,-0.0769012326664299,0.229059900505658,0.040649867919656,0.0421199078274834,0.0422763264101183,0.0190536301244596,0.00338549930865139,0.068077488088728,0.0940429241685219,0.0199743373433682,-0.00802185690865334,0.00775277697774735,0.238771292308582,0.380675081020958,0.0816327790813662,-0.123125213432776,-0.0654544578572156,0.00758080933331738,0.0478208413360511,-0.163412796406173,-0.0447883635547179,-0.0636992799282932,-0.172797409789786,0.0488714901767943,-0.422385704019078,-0.347570285039348,-0.275218888194923,0.0300460438139667,0.0587030913441039,-0.0831218229197875,-0.0758231677124031,-0.0157854164524604,-0.0819273481357551,0.167428324831674,0.0898445946211189,-0.0607790435743661,0.0404423876687625,0.168262948883482,0.276114562175004,0.152111658854137,0.174768652498672,0.0573047342260923,0.220581116149905,0.154327656339592,0.101269791949609,0.0463469997612425,-0.0207501396968227,-0.0328066593566591,0.168993208786773,0.0740791754919426,0.0571594785103944,0.103199845979372,0.0248228014549702,0.117414166309691,0.00503370447170225,0.112203452275564,0.0279531764815558,0.00686741469171892,-0.0292378861147533,-0.133331063230196,0.153204759446322,0.072519394770693,-0.187878936694492,-0.190234639590485,-0.0766994138752695,-0.180434520676242,-0.161163331218007,-0.0200286853103729,-0.234305366770211,-0.0722780285812288,-0.228923932950965,-0.08288479469663,-0.0730421166520571,-0.0262308806672924,-0.0965867177568669,-0.176434193444289,-0.190267818148567,-0.0484183864747501,-0.140134561962001,-0.106713150891576,-0.0692407786803712,-0.0939287947479603,-0.187919181574145,-0.00460733696085336,-0.0194595859941702,-0.0987957245068164,-0.159233635554362,-0.182973504104989,0.1459417154005,0.0248875465483497,0.00501884226221539,-0.140040262034913,-0.125778649539345,-0.0790375847549215,-0.0591078637280154,-0.0180733665906968,-0.256032730559626,-0.152683913943343,-0.0618850402726051,-0.13465251528582,-0.07452233885461,-0.0548653708312987,-0.215938368976992,-0.0723917391303172,0.117526520435745,0.121557928969729,0.0847034417158204,0.0652232284473134,-0.0175950802115707,-0.166668199561317,0.00999767509361327,-0.0179895950821106,0.059696805738839,-0.0546934653547982,-0.0400229931470521,-0.12645018389954,-0.0205102850718396,-0.0252526634665117,0.136085659909044,0.0421605709302149,0.0126096848984968,0.178013159866769,0.11305136268642,0.105906594112465,0.0540284932474441,0.129158633468982,-0.0697737784417584,0.40839089014871,-0.030429170817252,-0.175022521785787,-0.120058724362294,0.10533630661139,0.130659726026721,0.128475689226384,0.0960250551906995,0.236834810096685,-0.0529545894369493,0.007097043351174,0.293317842702033,0.0162395557795302,0.108521845124644,-0.0988489920020688,-0.02781424823085,-0.0672828438121744,0.101072052988664,-0.012427619304481,0.0797205360067049,-0.0426886053195307,-0.0157319239950031,0.0142253523833631,-0.0524239116488035,0.036672350643285,0.0646096389225004,0.068473162566978,0.113092028911662,0.0527347174736618,0.303749789167498,-0.0580907928083007,0.105177677810155,0.153230928760805,-0.153613018195828,0.215037405613327,0.220035436042683,0.172276339439545,0.265617645875983,0.117078246118681,0.124466356131582,0.154222594110405,0.120137148507024,-0.0055536637708613,-0.115065639006012,-0.0248080381195103,0.146205757649643,0.0662516869717252,0.130894941909494,0.270375785528836,-0.0368986028779636,0.169357701193326,-0.00720456231349455,0.191137010234915,0.0522057778379626,0.118728911831773,0.0568416213556604,-0.0433812694289683,0.0282407566175545,0.17195526000018,0.0343000546619227,0.033778325798129,0.0864956452854264,0.255546140608316,0.119897691837776,-0.135512225481786,-0.0347092266427655,-0.0207478812281761,0.116819512711834,0.0622383092503104,0.0772194018804679,0.0522258831148959,-0.0366011835769985,0.103166088857714,0.0829666128204422,0.111699299807286,0.0258110703501563,0.0990869759810442,0.196726713519774,0.10481446536882,0.0805806577235249,0.0253141035981188,0.106253810670893,0.128274921815668,0.113953590194072,0.152517623582564,0.203585973696302,0.0955710009706907,-0.089271458434438,0.171824616084799,0.172748998654465,0.116484021851578,0.0121453406437753,-0.0480632646858731,0.229119023983217,0.134415744929952,0.241260900766367,0.145810412717066,0.0362875708629832,-0.0782574353801194,0.095741486105754,0.202312276296074,-0.163488153538774,-0.224932664027995,-0.252038399486098,0.0792267188665921,0.0573440050557026,0.0164767074083667,0.0616701530080551,0.143467137955942,0.221229225921325,0.101467798090948,0.113151941222543,0.063573472982542,0.147366189563029,0.172789899025556,0.124073726811104,0.13889869818929,0.328514991859682,0.365431074729134,0.0100893491921408,0.00790484839428594,0.0744633748574184,0.0295722941356743,-0.0138359053811041,0.154305148739343,0.106119355563033,0.130338727189929,0.0569947268003259,-0.0128547354354818,0.0990271381164246,-0.0306773902733554,-0.0730978079738378,0.186593837549966,0.083794603970145,0.174655077255059,0.252057149133742,0.0443513019002219|full_id=C972_granulocyte_CD4_CD19_Neutrophils_acute_CD8_Eosinophils|gostat_on_coexpression_clusters=GO:0004484!mRNA guanylyltransferase activity!0.0100778500780597!8732$GO:0004651!polynucleotide 5'-phosphatase activity!0.0100778500780597!8732$GO:0019204!nucleotide phosphatase activity!0.0100778500780597!8732$GO:0009452!RNA capping!0.0100778500780597!8732$GO:0006370!mRNA capping!0.0100778500780597!8732$GO:0008192!RNA guanylyltransferase activity!0.0125960147274817!8732$GO:0006397!mRNA processing!0.0266730623567725!8732;55119$GO:0016071!mRNA metabolic process!0.0363574422340447!8732;55119$GO:0010467!gene expression!0.0461902140241185!23469;8732;27107;26098;55119|id=C972|ontology_enrichment_celltype=CL:0000037!9.56e-49!168;CL:0000566!9.56e-49!168;CL:0002032!1.96e-44!161;CL:0000837!1.96e-44!161;CL:0000988!2.75e-44!177;CL:0000738!3.66e-43!136;CL:0002031!1.44e-34!120;CL:0002087!4.03e-33!115;CL:0000763!3.43e-24!108;CL:0000049!3.43e-24!108;CL:0000766!6.21e-19!72;CL:0002242!9.62e-19!55;CL:0000542!1.01e-18!53;CL:0000051!1.01e-18!53;CL:0000838!1.10e-18!52;CL:0000557!2.71e-16!67;CL:0000860!2.73e-15!42;CL:0002057!2.73e-15!42;CL:0000839!5.91e-15!66;CL:0002009!8.32e-14!61;CL:0002194!5.97e-13!59;CL:0000576!5.97e-13!59;CL:0000040!5.97e-13!59;CL:0000559!5.97e-13!59;CL:0000473!1.22e-12!48;CL:0000234!1.22e-12!48;CL:0000791!6.01e-11!18;CL:0000789!6.01e-11!18;CL:0002420!6.01e-11!18;CL:0002419!6.01e-11!18;CL:0000790!6.01e-11!18;CL:0000084!6.28e-10!25;CL:0000827!6.28e-10!25;CL:0000945!2.83e-08!24;CL:0000826!2.83e-08!24;CL:0000625!1.01e-07!11;CL:0000236!1.28e-07!14|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0002390!1.01e-19!98;UBERON:0003061!1.01e-19!98;UBERON:0002193!2.05e-16!108;UBERON:0002371!1.53e-12!76;UBERON:0001474!2.04e-12!82;UBERON:0002405!1.55e-11!93;UBERON:0007023!1.99e-11!114;UBERON:0004765!9.45e-09!90;UBERON:0001434!3.27e-07!100;UBERON:0000178!5.86e-07!15;UBERON:0000179!5.86e-07!15;UBERON:0000463!5.86e-07!15|tf_chipseq_enrich=BHLHE40#8553;2:11.2179533867444:0.012714725561129:0.0458691959543608!BRCA1#672;5:12.6151441520149:1.47177326411908e-05:0.000349500973013489!CCNT2#905;7:5.5441763798423:1.68072647241023e-05:0.000387234485003425!CEBPB#1051;4:3.98557381291241:0.0113916368873439:0.0417449531535897!CHD2#1106;5:6.46501427132304:0.000367624325807319:0.00366113444864981!E2F1#1869;7:4.29396556301941:9.58670853279727e-05:0.00137079169284887!E2F4#1874;4:6.33403015764222:0.00209554945990464:0.0121203461285363!E2F6#1876;6:3.76286679877304:0.00120768002799781:0.0081875296620619!ELF1#1997;8:4.25809795880754:9.24826870984006e-06:0.000246649626094736!ELK4#2005;6:12.176761243851:1.37005744708648e-06:5.33311329542547e-05!ETS1#2113;5:6.08047557637646:0.000491337434624924:0.0043922614341173!FOS#2353;4:4.4989776544472:0.00737448991622712:0.0304842411383671!GABPB1#2553;7:6.1842233566594:7.95182205325426e-06:0.000221284397394037!GTF2F1#2962;5:7.96228804797353:0.000136205383133915:0.0017810384386031!HEY1#23462;8:4.04011104310571:1.4081650274634e-05:0.00033941229472248!HMGN3#9324;5:5.11159232709412:0.00110951597588993:0.00770918362091464!IRF1#3659;7:6.68251828436841:4.6709523292352e-06:0.000145144180396607!IRF3#3661;3:17.6182320793086:0.000497999438667357:0.00440133395743252!JUND#3727;5:4.37166496366939:0.00228902200936671:0.0129904455597593!MAX#4149;6:4.83941663175534:0.000291750431370536:0.00309781652113739!MXI1#4601;5:6.22598226797456:0.000439395490353943:0.00409476448800531!MYC#4609;6:3.91671140370705:0.000964927056924644:0.00694001906880744!NFKB1#4790;6:4.11604756814538:0.000729985658978431:0.00581666073381006!NFYA#4800;4:9.21279034991526:0.000508523135168021:0.00445588117407609!NFYB#4801;4:8.37989662676823:0.000729691402927855:0.00581653491301956!NR2C2#7182;3:12.2304790894653:0.00143680376941648:0.00922357544250342!NRF1#4899;5:7.63142465481932:0.000166888299471845:0.00204549314734655!PAX5#5079;5:4.16847845698614:0.00284750870610728:0.0154384551605222!POLR2A#5430;8:2.14745317655807:0.00221072578897191:0.0127294073588288!POU2F2#5452;6:6.82959304330689:4.02833503357943e-05:0.000738485663633495!RFX5#5993;5:7.52994426699694:0.00017791725685856:0.00215888235030221!SIN3A#25942;7:4.73277413596324:4.948745034002e-05:0.000848116151306424!SIX5#147912;4:8.5433576777295:0.00067799930596263:0.00546960988069142!SP1#6667;5:3.56148836133806:0.00581376186659607:0.0261345274215739!SP2#6668;3:9.80757393519174:0.00270718466508561:0.0148894443750001!TAF1#6872;8:3.34304628574529:6.40776711117462e-05:0.00104435204326462!TAF7#6879;5:7.14566837807745:0.000228446663770041:0.00252020081519798!TBP#6908;7:3.24342435120934:0.000635422362049205:0.00521351842800353!TFAP2A#7020;3:6.19448788989186:0.00986148386238029:0.037051606759835!TFAP2C#7022;4:5.40461430493011:0.00377514689654701:0.0186496649509708!YY1#7528;7:4.29727440612212:9.53674534900876e-05:0.00136495566329331!ZBTB33#10009;3:11.8742718862429:0.00156455164595325:0.00992529972372663|tfbs_overrepresentation=0.34609,0.148901,0.849196,0.122235,0.0225521,0.0137121,0.110615,0.173242,0.0848916,0.0670884,0.329951,7.75463e-05,0.427578,0.0509255,0.348998,0.15667,0.333184,0.240912,0.134803,0.038041,0.019119,0.315644,0.0223753,0.0296652,0.107054,0.137674,0.465564,0.224005,0.0653003,0.230018,0.125739,0.275959,0.0473641,0.463487,0.167712,0.0237092,0.0014259,0.110518,0.0467013,0.168138,0.237041,0.0642921,0.0621735,0.103294,0.00523974,0.093749,0.0981932,0.100722,0.269921,0.0473291,0.0743477,0.138034,0.176339,0.0285325,0.446231,0.00509072,0.00027644,0.027009,0.195469,0.257345,0.00300916,0.350502,0.264034,0.189928,0.138981,0.129036,0.685923,0.152128,0.0245834,0.0864158,0.0401723,0.17045,0.0262409,0.287531,0.0198121,0.0449986,0.237072,0.112317,0.0962742,0.0192234,0.235123,0.151056,0.109358,0.277702,0.600801,0.538689,0.162509,0.0256913,0.243154,0.158699,0.212656,0.12683,0.234568,0.121395,0.21181,0.0428544,0.209773,0.359048,0.228604,0.210866,0.146046,0.577706,0.335028,0.0958161,0.482863,0.105454,0.168814,0.301103,0.00877211,0.0105617,0.101835,0.08811,0.0703263,0.0464689,0.033572,0.0874941,0.0533212,0.144037,0.329117,0.208244,0.0860871,0.475093,0.0622442,0.212715,0.250229,0.096075,0.0271861,0.0389643,0.0236487,5.2178e-05,0.0120368,0.187322,0.145395,0.0596149,0.301276,0.26293,0.163757,0.140842,0.0856983,0.0105126,0.059589,0.052178,0.0239289,0.0760906,0.0984714,0.174334,0.242306,0.209139,0.0052288,0.290656,0.449653,0.0652407,0.412289,0.069324,0.109875,0.283569,0.187146,0.499118,0.131992,0.087425,0.497965,0.234343,0.281603,0.347181,0.209997,0.276476,0.103223,0.304631,0.00560862,0.631236,0.0988703,0.0602565,0.495126,0.137927,0.021309,0.222543,0.331842,0.101034,0.407949,0.0922244,0.369521,0.0482759,0.0714241,0.279284,0.18472,0.286375,0.102277,0.10358,0.206008,0.0927457,0.260822,0.424801,0.295169,0.153327,0.0411981,0.120656,0.195303,0.152795,0.170383,0.26639,0.220771,0.000675009,0.0801204,0.153558,0.323763,0.191504,0.0552406,0.355444,0.12724,0.407776,0.117684,0.254651,0.291346,0.0413577,0.0189566,0.389728,0.0837009,0.247049,0.159292,0.251613,0.335144,0.352671,0.363941,0.0807192,0.185037,0.30302,0.0611869,0.213152,0.153196,0.151857,0.00226032,0.141835,0.10772,0.191224,0.235781,0.00243628,0.121035,0.196283,0.0830393,0.00432604,0.415649,0.000189198,0.241356,0.206521,0.280824,0.324571,0.202866,0.0404882,0.35321,0.282438,0.078888,0.0181213,0.105076,0.240524,0.240662,0.0794631,0.261035,0.451876,0.174963,0.411538,0.156722,0.0942689,0.0829212,0.306175,0.0894087,0.201841,0.202064,0.22706,0.284712,0.0190889,0.216529,0.160003,0.00129376,0.000238207,0.214569,0.0982663,0.310576,0.415789,0.646713,0.580787,0.750248,0.64733,0.678955,0.014697,0.297165,0.00168035,0.554495,0.793274,0.131022,0.25929,0.538078,0.657245,0.0121505,0.0928761,0.334233,0.115674,0.57104,0.23536,0.750422,0.154596,0.410376,0.436717,0.424714,0.699335,0.414206,0.43241,0.267081,0.0236891,0.481522,0.773523,0.71679,0.0871484,0.149395,0.143581,0.0492455,0.709284,0.0574778,0.527275,0.0445736,0.57865,0.248777,0.101267,0.270213,0.490622,0.556408,0.234951,0.589283,0.0817624,0.0835807,0.234746,0.470214,0.082836,0.015807,0.603063,0.00860205,0.202294,0.0381309,0.0835481,0.713436,0.415455,0.4124,0.0942604,0.0340424,0.576349,0.512994,0.421708,0.313288,0.606128,0.569508,0.0178902,0.286773,0.0459993,0.314892,0.533408,0.585986,0.00810873,0.0125815,0.16896,0.183237,0.420064,0.0985449,0.534189,0.0313411,0.415009,0.0112192,0.0631918,0.630217,0.0767248,0.141298,0.0803706,0.101796,0.115811,0.187131,0.500188,0.769073,0.0340833,0.844309,0.238882,0.308817,0.0086673,0.0645668,0.284998,0.591252,0.580536,0.279001,0.00435479,0.0329826,0.664854,0.117692,0.0763749,0.38661,0.060644,0.258036,0.0165577,0.306458,0.00751388,0.663224,0.0662078,0.342575,0.0106177,0.35838,0.0762561,0.00683048,0.539342,0.357127,0.11942,0.0597407,0.191277,0.320286,0.241774,0.352274,0.237496,0.224985,0.104294,0.255495,0.254395,0.102634,0.286808,0.0156207,0.59066,0.556078,0.332969,0.495426,0.404295,0.176045,0.339358,0.234178,0.174973,0.45983,0.590572,0.154067,0.199423,0.204349,0.302846,0.631352,0.0598124,0.334789,0.481647,0.00096595,0.371064,0.516584,0.129694,0.505783,0.428977,0.220397,0.151053,0.589962,0.00554698,0.679442,0.155206,0.682813,0.0959967,0.402141,0.0592011,0.000103313,0.0827993,0.175401,0.0105481,0.0202842,0.194711,0.146244,0.340075,0.146882,0.124299,0.00536333,0.0212566,0.11141,0.271341,0.0140004,0.111931,0.618587,0.302737,0.057911,0.260259,0.0111927,0.158807,0.722166,0.0470509,0.619467,0.583243,1.02888e-05,0.119202,0.390797,0.277129,0.255099,0.222257,0.214812,0.37149,0.260746,0.112737,0.0103413,0.296578,0.308422,0.00398345,0.436759,0.678228,0.00853587,0.206068,0.0149976,0.000237195,0.269909,0.0295078,0.293328,0.0212224,0.314851,0.00258989,0.123376,0.120242,0.00308198,0.0522956,0.0155926,0.0179303,0.390074,0.216979,0.234229,0.0297344,0.000650558,0.0373621,0.212356,0.0127838,0.0928906,0.333467,0.133213,0.0781888,0.313482,0.114368,0.13361,0.464613,0.35815,0.198877,0.239159,0.0799034,0.296436,0.223838,0.141981,0.000315866,0.0146461,0.325601,0.038461,0.165742,0.0266598,0.143531,0.199711,0.189558,0.375413,0.435903,0.139793,0.19465,0.142897,0.10753,0.0894806,0.100334,0.045125,0.392173,0.450361,0.125132,0.000193148,0.0086627,0.0857811,0.681349,0.142384,0.101821,0.151258,0.00378048,0.294186,0.264629,0.267153,0.554314,0.0744668,0.0646885,0.00883442,0.10027,0.0253486,0.140095,0.0655734,0.0446344,0.479289,0.10958,0.312506,0.15125,0.163374,0.00236665,0.190339,0.39643,0.203718,0.0174336,0.66316,0.346997,0.33418,0.386217,0.0626613,0.219989,7.72481e-05,0.228423,0.121222,0.233436,0.0750847,0.316293,0.193405,0.265337,0.052921,0.313275,0.0388281,0.471283,0.132332,0.243599,0.127929,0.1565,0.188908,0.230656,0.339566,0.0881682,0.18579,0.214833,0.15441,0.540064,0.479647,0.0646306,0.00502647,0.112152,0.407023,0.00610948,0.146252,0.12193,0.735829,0.154198,0.401916,0.247107,0.179067,0.491271,0.233925,0.0920973,0.300879,0.40148,0.00279422,0.000234043,0.127414,0.0290517,0.263319,0.169668,0.264355,0.126386,0.235621,0.126607,0.189069,0.117159,0.267581,0.1766,0.150175,0.358721,0.0973803,0.315733,0.115553,0.13739,0.276387,0.229078,0.396303,0.255961,0.487366,0.0111046,0.509288,0.190011,0.000346608,0.00110889,0.114789,5.89644e-06,0.248532,0.00459787,0.397384,0.101977,0.354931,0.158525,0.43239,0.0694688,0.120717,0.36346,0.180408,0.226687,0.152678,0.0657756,0.35297,0.0311739,0.0752133,0.0142235,0.113409,0.325366,0.152528,0.0435325,0.0638758,0.0457329,0.0233934,0.658265,0.273994,0.0411841,0.0185408,0.0153348,0.0296333,0.00155181,0.0423564,0.332254,0.24444,0.548105,0.253118,0.273827,0.0667061,0.387479,0.223866,0.416785,0.385626,0.427353,0.0220668,0.420356,0.364345,0.263009,0.127426,0.149927,0.00111314,0.0162704,0.14084,0.0342257,0.0531363,0.259559,0.0933565,0.170607,0.0549043,0.111737,0.000657917,0.423292,0.0363399,0.213948,0.752206,0.504402,0.00584137,0.45682,0.708393,0.772671,0.0772237,0.443827,0.74047,0.697643,0.750697,0.365852,0.0308518,0.144997,0.778763,0.058949,0.380149,0.53287,0.552306,0.073583,0.586755,0.0119422,0.00159449,0.496897,0.0482032,0.256447,0.0433779,0.225029,0.558783,0.0662569,0.459739,0.597402,0.380163,0.493115,0.595604,0.196496,0.00209549,0.664803,0.238873,0.549112,0.467799,0.171139,0.111275,0.0453618,0.282108,0.367425,0.375011,0.507793,0.0074966,0.545241,0.141954,0.0380128,0.0573179,0.516094,0.0239912,0.0336132,0.0477737,0.454729,0.44937,0.458665,0.614438,0.00872336,0.772399,0.681923,0.369258,0.364029,0.333879,0.413613,0.236293,0.63458,0.689159,0.379433,0.502911,0.289349,0.590067,0.181415,0.634568,0.413633,0.221848,0.378522,0.723803,0.408119,0.306531,0.277896,0.31842,0.66902,0.0429004,0.144327,0.860789,7.17821e-09,0.87196,0.488054,0.175541,0.76203,0.00710002,0.0281873,0.0848918,0.457276,0.218201,0.328805,6.80971e-05,0.0862734,0.117909,0.207197,0.0829992,0.00906581,0.401684,0.0955071,0.71269,0.138834,0.0539372,0.123358,0.150245,0.147977,0.699838,0.512211,0.124111,0.573299,0.715409,0.21092,0.320372,0.056251,0.287129,0.622298,0.520881,0.0371672,0.62342,0.619131,0.839028,0.728293,0.563902,0.537256,0.00213841,0.0255319,0.0124229,0.484879,0.295517,0.442887,0.111134,0.494783,0.233058,0.0177404,0.00681138,0.588879,0.025442,0.094362,0.743413,0.573115,0.346045,0.575942,0.141644,0.823302,0.117684,0.669433,0.44442,0.917799,0.14412,0.660067,0.324374,0.613531,0.502199,0.0244346,0.0955535,0.194485,0.05713,0.458152,0.0873966,0.42925,0.55014,0.426623,0.180477,0.559835,0.376936,0.431837,0.377907,0.483463,0.129162,0.0268326,0.234528,0.383967,0.539263,0.718529,0.544718,0.128619,0.794152,0.409798,0.436622,0.486064,0.489702,0.672033,0.261338,0.0289822,0.118761,0.106179,0.0489133,0.447485,0.0845698,0.0287194,0.297555,0.410714,0.0324784,0.581581,0.212206,0.31257,0.129563,0.0416546,0.488584,0.169631,0.4639,0.200812,0.041492,0.0669746,0.500922,0.376098,0.00556691,0.389123,0.0993883,0.1667,0.133211,0.116907,0.565967,0.122032,0.683557,0.361689,0.289284,0.241971,0.263726,0.151053,0.477267,0.368791,0.485034,0.43963,0.0495832,0.551399,0.257441,0.412086,0.371597,0.00882204,0.353179,0.0286417,0.297272,0.103601,0.42109,0.18144,0.0470683,0.554803,0.0238809,0.135754,0.0251749,0.335015,0.435559,0.0423812,0.28015,0.492484,0.174543,0.397471,0.120747,0.00800854,0.443138,0.519779,0.364755,0.312488,0.188344,0.00499849,0.0913415,0.404755,0.238065,0.0233313,0.0184454,0.585012,0.14076,0.204547,0.452254,0.259924,0.136638,0.137048,0.353983,0.0203315,0.104944,0.136955,0.642324,0.194507,0.469052,0.425619,0.0353152,0.0193906,0.202353,0.240717,0.162041,0.292976,0.161384,0.255196,0.167238,0.190639,0.307532,0.265287,0.113346,0.168727,0.221472,0.095012,0.320667,0.456504,0.607439,0.5938,0.314355,0.334729,0.196377,0.545435,0.448658,0.497569,0.070456,0.183915,0.406439,0.589165,0.559083,0.313926,0.0803766,0.024718,0.447066,0.228122,0.512982,0.649607,0.279812,0.481032,0.491197,0.278645,0.439191,0.431751,0.586217,0.0608882,0.535591,0.381036,0.491941,0.230489,0.653021,0.494548,0.462673,0.23568,0.213047,0.27019,0.394858,0.369527,0.569966,0.178571,0.568909,0.247225,0.48895,0.403105,0.366377,0.476867,0.183005,0.459344,0.697624|tfbs_overrepresentation_for_novel_motifs=0.920816,1.25141,1.62205,0.481684,0.301904,0.480078,1.36559,0.19223,0.555925,0.994235,1.14354,0.597407,0.152895,1.34165,0.300614,0.322799,0.774423,0.250594,0.163559,1.96132,0.341703,0.405031,2.06961,0.805193,1.00212,0.619829,0.833436,0.470396,1.49106,0.777139,1.09762,0.810962,1.17878,0.469827,0.269459,0.0649851,1.35136,1.20926,0.244807,0.518171,0.268162,1.06332,0.201367,0.299183,0.0775086,0.371118,0.555735,0.440085,0.0498256,0.822946,1.53217,1.39237,0.309329,2.05604,1.03948,2.31305,0.308962,0.514077,0.388089,1.27736,0.85167,1.37279,0.190442,0.746929,2.4092,0.712797,1.12756,1.49516,0.800646,1.33315,1.03556,0.197328,0.63188,1.03748,0.891424,1.36791,0.127753,0.730167,0.797419,0.379656,0.167664,0.745864,0.575394,0.567311,0.986227,0.730725,0.26222,0.759942,0.659621,1.59442,1.22073,0.959334,0.827657,0.227232,0.302606,0.239285,0.488357,0.87,0.664183,0.345507,0.246049,0.822041,0.864454,0.778061,0.701386,1.13403,0.762347,0.539961,1.00159,1.42617,0.92894,2.00355,0.336372,1.1633,1.17281,0.265019,0.826889,0.428232,0.710479,0.229841,1.02923,0.657218,0.477387,0.586509,1.28328,0.730921,0.548418,0.83262,1.07171,0.240162,0.960022,1.10364,1.08604,0.583225,1.23359,0.735874,0.423593,0.470947,1.19123,2.04907,1.64679,1.15398,0.550118,0.866494,0.703126,0.505785,0.686615,1.88987,0.410382,1.1925,0.283443,1.14002,0.960402,1.03091,0.557588,1.36372,0.643609,0.288769,0.385642,0.941217,1.15277,0.941964,0.796636,1.68988,0.71907,0.574616,0.213234,0.553354,1.23035|tfbs_overrepresentation_jaspar=MA0003.1;1.34332,MA0004.1;1.15451,MA0006.1;1.47431,MA0007.1;0.437331,MA0009.1;0.918715,MA0014.1;2.6969,MA0017.1;0.337901,MA0019.1;0.602411,MA0024.1;0.813542,MA0025.1;1.05265,MA0027.1;2.5321,MA0028.1;1.52958,MA0029.1;0.832916,MA0030.1;0.821423,MA0031.1;0.756713,MA0038.1;0.557409,MA0040.1;0.838784,MA0041.1;0.474018,MA0042.1;0.442535,MA0043.1;0.919032,MA0046.1;0.90778,MA0048.1;0.316923,MA0050.1;1.12793,MA0051.1;0.553205,MA0052.1;0.842664,MA0055.1;1.64271,MA0056.1;0,MA0057.1;0.632427,MA0058.1;0.950944,MA0059.1;0.361075,MA0060.1;2.3723,MA0061.1;0.497495,MA0063.1;0,MA0066.1;0.557833,MA0067.1;1.23721,MA0068.1;0.823119,MA0069.1;0.903908,MA0070.1;0.892666,MA0071.1;0.518907,MA0072.1;0.888148,MA0073.1;0.131075,MA0074.1;0.552456,MA0076.1;2.62795,MA0077.1;0.880402,MA0078.1;0.652193,MA0081.1;0.361233,MA0083.1;0.926258,MA0084.1;1.42483,MA0087.1;0.885691,MA0088.1;1.17773,MA0089.1;0,MA0090.1;0.391903,MA0091.1;0.458301,MA0092.1;0.421159,MA0093.1;0.818737,MA0095.1;0,MA0098.1;0,MA0100.1;1.40058,MA0101.1;0.30624,MA0103.1;0.291333,MA0105.1;0.0818021,MA0106.1;0.59853,MA0107.1;0.236528,MA0108.2;0.753643,MA0109.1;0,MA0111.1;0.405141,MA0113.1;0.614917,MA0114.1;0.655057,MA0115.1;1.1606,MA0116.1;0.673701,MA0117.1;0.956472,MA0119.1;0.345493,MA0122.1;0.982472,MA0124.1;1.11898,MA0125.1;1.0347,MA0130.1;0,MA0131.1;0.670358,MA0132.1;0,MA0133.1;0,MA0135.1;0.949204,MA0136.1;0.564434,MA0139.1;0.916926,MA0140.1;0.516266,MA0141.1;0.359385,MA0142.1;0.724856,MA0143.1;0.615094,MA0144.1;1.17059,MA0145.1;0.830366,MA0146.1;0.934908,MA0147.1;1.95811,MA0148.1;0.480298,MA0149.1;0.506665,MA0062.2;2.15478,MA0035.2;0.515566,MA0039.2;2.57832,MA0138.2;0.653421,MA0002.2;0.179788,MA0137.2;0.321796,MA0104.2;2.36725,MA0047.2;0.586412,MA0112.2;0.0572179,MA0065.2;0.844872,MA0150.1;0.386144,MA0151.1;0,MA0152.1;0.52279,MA0153.1;1.01778,MA0154.1;0.0799828,MA0155.1;0.43752,MA0156.1;0.865715,MA0157.1;0.697424,MA0158.1;0,MA0159.1;0.243637,MA0160.1;0.495355,MA0161.1;0,MA0162.1;1.29519,MA0163.1;1.06699,MA0164.1;0.627336,MA0080.2;0.303167,MA0018.2;1.46097,MA0099.2;0.523145,MA0079.2;2.23097,MA0102.2;1.46209,MA0258.1;0.209744,MA0259.1;1.29349,MA0442.1;0}} | ||
| | |||
}} | |||
Latest revision as of 11:34, 17 September 2013
Full id: C972_granulocyte_CD4_CD19_Neutrophils_acute_CD8_Eosinophils
Phase1 CAGE Peaks
| Hg19::chr10:127408263..127408308,+ | p1@C10orf137 |
| Hg19::chr11:47788847..47788919,- | p1@FNBP4 |
| Hg19::chr18:59854480..59854551,+ | p1@KIAA1468 |
| Hg19::chr1:109234907..109234996,+ | p1@PRPF38B |
| Hg19::chr2:32582184..32582301,+ | p1@BIRC6 |
| Hg19::chr3:101395963..101395993,- | p1@ZBTB11 |
| Hg19::chr6:64345698..64345750,+ | p2@PHF3 |
| Hg19::chr6:89673299..89673349,- | p1@RNGTT |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
| GO ID | GO name | FDR corrected p-value |
|---|---|---|
| GO:0004484 | mRNA guanylyltransferase activity | 0.0100778500780597 |
| GO:0004651 | polynucleotide 5'-phosphatase activity | 0.0100778500780597 |
| GO:0019204 | nucleotide phosphatase activity | 0.0100778500780597 |
| GO:0009452 | RNA capping | 0.0100778500780597 |
| GO:0006370 | mRNA capping | 0.0100778500780597 |
| GO:0008192 | RNA guanylyltransferase activity | 0.0125960147274817 |
| GO:0006397 | mRNA processing | 0.0266730623567725 |
| GO:0016071 | mRNA metabolic process | 0.0363574422340447 |
| GO:0010467 | gene expression | 0.0461902140241185 |
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.01e-19 | 98 |
| blood island | 1.01e-19 | 98 |
| hemolymphoid system | 2.05e-16 | 108 |
| bone marrow | 1.53e-12 | 76 |
| bone element | 2.04e-12 | 82 |
| immune system | 1.55e-11 | 93 |
| adult organism | 1.99e-11 | 114 |
| skeletal element | 9.45e-09 | 90 |
| skeletal system | 3.27e-07 | 100 |
| blood | 5.86e-07 | 15 |
| haemolymphatic fluid | 5.86e-07 | 15 |
| organism substance | 5.86e-07 | 15 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
| MA0003.1 | 1.34332 |
| MA0004.1 | 1.15451 |
| MA0006.1 | 1.47431 |
| MA0007.1 | 0.437331 |
| MA0009.1 | 0.918715 |
| MA0014.1 | 2.6969 |
| MA0017.1 | 0.337901 |
| MA0019.1 | 0.602411 |
| MA0024.1 | 0.813542 |
| MA0025.1 | 1.05265 |
| MA0027.1 | 2.5321 |
| MA0028.1 | 1.52958 |
| MA0029.1 | 0.832916 |
| MA0030.1 | 0.821423 |
| MA0031.1 | 0.756713 |
| MA0038.1 | 0.557409 |
| MA0040.1 | 0.838784 |
| MA0041.1 | 0.474018 |
| MA0042.1 | 0.442535 |
| MA0043.1 | 0.919032 |
| MA0046.1 | 0.90778 |
| MA0048.1 | 0.316923 |
| MA0050.1 | 1.12793 |
| MA0051.1 | 0.553205 |
| MA0052.1 | 0.842664 |
| MA0055.1 | 1.64271 |
| MA0056.1 | 0 |
| MA0057.1 | 0.632427 |
| MA0058.1 | 0.950944 |
| MA0059.1 | 0.361075 |
| MA0060.1 | 2.3723 |
| MA0061.1 | 0.497495 |
| MA0063.1 | 0 |
| MA0066.1 | 0.557833 |
| MA0067.1 | 1.23721 |
| MA0068.1 | 0.823119 |
| MA0069.1 | 0.903908 |
| MA0070.1 | 0.892666 |
| MA0071.1 | 0.518907 |
| MA0072.1 | 0.888148 |
| MA0073.1 | 0.131075 |
| MA0074.1 | 0.552456 |
| MA0076.1 | 2.62795 |
| MA0077.1 | 0.880402 |
| MA0078.1 | 0.652193 |
| MA0081.1 | 0.361233 |
| MA0083.1 | 0.926258 |
| MA0084.1 | 1.42483 |
| MA0087.1 | 0.885691 |
| MA0088.1 | 1.17773 |
| MA0089.1 | 0 |
| MA0090.1 | 0.391903 |
| MA0091.1 | 0.458301 |
| MA0092.1 | 0.421159 |
| MA0093.1 | 0.818737 |
| MA0095.1 | 0 |
| MA0098.1 | 0 |
| MA0100.1 | 1.40058 |
| MA0101.1 | 0.30624 |
| MA0103.1 | 0.291333 |
| MA0105.1 | 0.0818021 |
| MA0106.1 | 0.59853 |
| MA0107.1 | 0.236528 |
| MA0108.2 | 0.753643 |
| MA0109.1 | 0 |
| MA0111.1 | 0.405141 |
| MA0113.1 | 0.614917 |
| MA0114.1 | 0.655057 |
| MA0115.1 | 1.1606 |
| MA0116.1 | 0.673701 |
| MA0117.1 | 0.956472 |
| MA0119.1 | 0.345493 |
| MA0122.1 | 0.982472 |
| MA0124.1 | 1.11898 |
| MA0125.1 | 1.0347 |
| MA0130.1 | 0 |
| MA0131.1 | 0.670358 |
| MA0132.1 | 0 |
| MA0133.1 | 0 |
| MA0135.1 | 0.949204 |
| MA0136.1 | 0.564434 |
| MA0139.1 | 0.916926 |
| MA0140.1 | 0.516266 |
| MA0141.1 | 0.359385 |
| MA0142.1 | 0.724856 |
| MA0143.1 | 0.615094 |
| MA0144.1 | 1.17059 |
| MA0145.1 | 0.830366 |
| MA0146.1 | 0.934908 |
| MA0147.1 | 1.95811 |
| MA0148.1 | 0.480298 |
| MA0149.1 | 0.506665 |
| MA0062.2 | 2.15478 |
| MA0035.2 | 0.515566 |
| MA0039.2 | 2.57832 |
| MA0138.2 | 0.653421 |
| MA0002.2 | 0.179788 |
| MA0137.2 | 0.321796 |
| MA0104.2 | 2.36725 |
| MA0047.2 | 0.586412 |
| MA0112.2 | 0.0572179 |
| MA0065.2 | 0.844872 |
| MA0150.1 | 0.386144 |
| MA0151.1 | 0 |
| MA0152.1 | 0.52279 |
| MA0153.1 | 1.01778 |
| MA0154.1 | 0.0799828 |
| MA0155.1 | 0.43752 |
| MA0156.1 | 0.865715 |
| MA0157.1 | 0.697424 |
| MA0158.1 | 0 |
| MA0159.1 | 0.243637 |
| MA0160.1 | 0.495355 |
| MA0161.1 | 0 |
| MA0162.1 | 1.29519 |
| MA0163.1 | 1.06699 |
| MA0164.1 | 0.627336 |
| MA0080.2 | 0.303167 |
| MA0018.2 | 1.46097 |
| MA0099.2 | 0.523145 |
| MA0079.2 | 2.23097 |
| MA0102.2 | 1.46209 |
| MA0258.1 | 0.209744 |
| MA0259.1 | 1.29349 |
| MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
| TF | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| BHLHE40#8553 | 2 | 11.2179533867444 | 0.012714725561129 | 0.0458691959543608 |
| BRCA1#672 | 5 | 12.6151441520149 | 1.47177326411908e-05 | 0.000349500973013489 |
| CCNT2#905 | 7 | 5.5441763798423 | 1.68072647241023e-05 | 0.000387234485003425 |
| CEBPB#1051 | 4 | 3.98557381291241 | 0.0113916368873439 | 0.0417449531535897 |
| CHD2#1106 | 5 | 6.46501427132304 | 0.000367624325807319 | 0.00366113444864981 |
| E2F1#1869 | 7 | 4.29396556301941 | 9.58670853279727e-05 | 0.00137079169284887 |
| E2F4#1874 | 4 | 6.33403015764222 | 0.00209554945990464 | 0.0121203461285363 |
| E2F6#1876 | 6 | 3.76286679877304 | 0.00120768002799781 | 0.0081875296620619 |
| ELF1#1997 | 8 | 4.25809795880754 | 9.24826870984006e-06 | 0.000246649626094736 |
| ELK4#2005 | 6 | 12.176761243851 | 1.37005744708648e-06 | 5.33311329542547e-05 |
| ETS1#2113 | 5 | 6.08047557637646 | 0.000491337434624924 | 0.0043922614341173 |
| FOS#2353 | 4 | 4.4989776544472 | 0.00737448991622712 | 0.0304842411383671 |
| GABPB1#2553 | 7 | 6.1842233566594 | 7.95182205325426e-06 | 0.000221284397394037 |
| GTF2F1#2962 | 5 | 7.96228804797353 | 0.000136205383133915 | 0.0017810384386031 |
| HEY1#23462 | 8 | 4.04011104310571 | 1.4081650274634e-05 | 0.00033941229472248 |
| HMGN3#9324 | 5 | 5.11159232709412 | 0.00110951597588993 | 0.00770918362091464 |
| IRF1#3659 | 7 | 6.68251828436841 | 4.6709523292352e-06 | 0.000145144180396607 |
| IRF3#3661 | 3 | 17.6182320793086 | 0.000497999438667357 | 0.00440133395743252 |
| JUND#3727 | 5 | 4.37166496366939 | 0.00228902200936671 | 0.0129904455597593 |
| MAX#4149 | 6 | 4.83941663175534 | 0.000291750431370536 | 0.00309781652113739 |
| MXI1#4601 | 5 | 6.22598226797456 | 0.000439395490353943 | 0.00409476448800531 |
| MYC#4609 | 6 | 3.91671140370705 | 0.000964927056924644 | 0.00694001906880744 |
| NFKB1#4790 | 6 | 4.11604756814538 | 0.000729985658978431 | 0.00581666073381006 |
| NFYA#4800 | 4 | 9.21279034991526 | 0.000508523135168021 | 0.00445588117407609 |
| NFYB#4801 | 4 | 8.37989662676823 | 0.000729691402927855 | 0.00581653491301956 |
| NR2C2#7182 | 3 | 12.2304790894653 | 0.00143680376941648 | 0.00922357544250342 |
| NRF1#4899 | 5 | 7.63142465481932 | 0.000166888299471845 | 0.00204549314734655 |
| PAX5#5079 | 5 | 4.16847845698614 | 0.00284750870610728 | 0.0154384551605222 |
| POLR2A#5430 | 8 | 2.14745317655807 | 0.00221072578897191 | 0.0127294073588288 |
| POU2F2#5452 | 6 | 6.82959304330689 | 4.02833503357943e-05 | 0.000738485663633495 |
| RFX5#5993 | 5 | 7.52994426699694 | 0.00017791725685856 | 0.00215888235030221 |
| SIN3A#25942 | 7 | 4.73277413596324 | 4.948745034002e-05 | 0.000848116151306424 |
| SIX5#147912 | 4 | 8.5433576777295 | 0.00067799930596263 | 0.00546960988069142 |
| SP1#6667 | 5 | 3.56148836133806 | 0.00581376186659607 | 0.0261345274215739 |
| SP2#6668 | 3 | 9.80757393519174 | 0.00270718466508561 | 0.0148894443750001 |
| TAF1#6872 | 8 | 3.34304628574529 | 6.40776711117462e-05 | 0.00104435204326462 |
| TAF7#6879 | 5 | 7.14566837807745 | 0.000228446663770041 | 0.00252020081519798 |
| TBP#6908 | 7 | 3.24342435120934 | 0.000635422362049205 | 0.00521351842800353 |
| TFAP2A#7020 | 3 | 6.19448788989186 | 0.00986148386238029 | 0.037051606759835 |
| TFAP2C#7022 | 4 | 5.40461430493011 | 0.00377514689654701 | 0.0186496649509708 |
| YY1#7528 | 7 | 4.29727440612212 | 9.53674534900876e-05 | 0.00136495566329331 |
| ZBTB33#10009 | 3 | 11.8742718862429 | 0.00156455164595325 | 0.00992529972372663 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.
