Personal tools

FFCP PHASE1:Mm9::chrX:50280126..50280140,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=9|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:50280126..50280140,+|id=chrX:50280126..50280140,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!2.56e-25!3;UBERON:0006555!2.56e-25!3;UBERON:0005103!2.56e-25!3;UBERON:0000083!2.56e-25!3;UBERON:0009201!2.56e-25!3;UBERON:0004819!2.56e-25!3;UBERON:0006553!2.56e-25!3;UBERON:0003074!2.56e-25!3;UBERON:0003060!2.56e-25!3;UBERON:0000080!3.57e-19!4;UBERON:0005904!3.57e-19!4;UBERON:0006947!3.57e-19!4;UBERON:0002120!3.57e-19!4;UBERON:0004054!3.57e-19!4;UBERON:0004875!3.57e-19!4;UBERON:0004876!3.57e-19!4;UBERON:0005721!3.57e-19!4;UBERON:0005754!3.57e-19!4;UBERON:0007297!3.57e-19!4;UBERON:0001343!2.72e-17!2;UBERON:0004910!2.72e-17!2;UBERON:0004909!2.72e-17!2;UBERON:0005154!2.72e-17!2;UBERON:0005295!2.72e-17!2;UBERON:0005297!2.72e-17!2;UBERON:0005294!2.72e-17!2;UBERON:0010141!2.72e-17!2;UBERON:0005891!2.72e-17!2;UBERON:0000058!5.27e-13!6;UBERON:0004871!7.41e-12!3;UBERON:0005156!4.23e-11!26;UBERON:0000990!4.23e-11!26;UBERON:0003064!1.36e-09!14;UBERON:0002113!1.43e-09!14;UBERON:0003918!1.43e-09!14;UBERON:0005095!1.43e-09!14;UBERON:0007687!1.43e-09!14;UBERON:0000993!3.65e-09!1;UBERON:0004175!7.28e-09!9;UBERON:0003133!1.39e-08!24;UBERON:0006554!2.08e-08!16;UBERON:0003887!4.95e-08!10;UBERON:0001008!6.29e-08!17;UBERON:0000991!1.55e-07!18;UBERON:0005564!1.55e-07!18;UBERON:0004122!1.80e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.28e-58,3;UBERON:0006555,3.28e-58,3;UBERON:0005103,3.28e-58,3;UBERON:0000083,3.28e-58,3;UBERON:0009201,3.28e-58,3;UBERON:0004819,3.28e-58,3;UBERON:0006553,3.28e-58,3;UBERON:0003074,3.28e-58,3;UBERON:0003060,3.28e-58,3;UBERON:0000080,4.54e-44,4;UBERON:0005904,4.54e-44,4;UBERON:0006947,4.54e-44,4;UBERON:0002120,4.54e-44,4;UBERON:0004054,4.54e-44,4;UBERON:0004875,4.54e-44,4;UBERON:0004876,4.54e-44,4;UBERON:0005721,4.54e-44,4;UBERON:0005754,4.54e-44,4;UBERON:0007297,4.54e-44,4;UBERON:0000058,7.57e-26,7;UBERON:0001343,9.50e-23,2;UBERON:0004910,9.50e-23,2;UBERON:0004909,9.50e-23,2;UBERON:0005154,9.50e-23,2;UBERON:0005295,9.50e-23,2;UBERON:0005297,9.50e-23,2;UBERON:0005294,9.50e-23,2;UBERON:0010141,9.50e-23,2;UBERON:0005891,9.50e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0003887,1.57e-18,10;UBERON:0004871,1.12e-15,3;UBERON:0002113,1.25e-13,14;UBERON:0003918,1.25e-13,14;UBERON:0011143,1.25e-13,14;UBERON:0003064,1.25e-13,14;UBERON:0005095,1.25e-13,14;UBERON:0007687,1.25e-13,14;UBERON:0003135,8.25e-13,15;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0004122,5.59e-10,5;UBERON:0000489,1.61e-09,21;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,8.8328949133166,37.4029682481839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:50280126..50280140,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=9
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chrX:50280126..50280140,+
|id=chrX:50280126..50280140,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001301!2.56e-25!3;UBERON:0006555!2.56e-25!3;UBERON:0005103!2.56e-25!3;UBERON:0000083!2.56e-25!3;UBERON:0009201!2.56e-25!3;UBERON:0004819!2.56e-25!3;UBERON:0006553!2.56e-25!3;UBERON:0003074!2.56e-25!3;UBERON:0003060!2.56e-25!3;UBERON:0000080!3.57e-19!4;UBERON:0005904!3.57e-19!4;UBERON:0006947!3.57e-19!4;UBERON:0002120!3.57e-19!4;UBERON:0004054!3.57e-19!4;UBERON:0004875!3.57e-19!4;UBERON:0004876!3.57e-19!4;UBERON:0005721!3.57e-19!4;UBERON:0005754!3.57e-19!4;UBERON:0007297!3.57e-19!4;UBERON:0001343!2.72e-17!2;UBERON:0004910!2.72e-17!2;UBERON:0004909!2.72e-17!2;UBERON:0005154!2.72e-17!2;UBERON:0005295!2.72e-17!2;UBERON:0005297!2.72e-17!2;UBERON:0005294!2.72e-17!2;UBERON:0010141!2.72e-17!2;UBERON:0005891!2.72e-17!2;UBERON:0000058!5.27e-13!6;UBERON:0004871!7.41e-12!3;UBERON:0005156!4.23e-11!26;UBERON:0000990!4.23e-11!26;UBERON:0003064!1.36e-09!14;UBERON:0002113!1.43e-09!14;UBERON:0003918!1.43e-09!14;UBERON:0005095!1.43e-09!14;UBERON:0007687!1.43e-09!14;UBERON:0000993!3.65e-09!1;UBERON:0004175!7.28e-09!9;UBERON:0003133!1.39e-08!24;UBERON:0006554!2.08e-08!16;UBERON:0003887!4.95e-08!10;UBERON:0001008!6.29e-08!17;UBERON:0000991!1.55e-07!18;UBERON:0005564!1.55e-07!18;UBERON:0004122!1.80e-07!5
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.28e-58,3;UBERON:0006555,3.28e-58,3;UBERON:0005103,3.28e-58,3;UBERON:0000083,3.28e-58,3;UBERON:0009201,3.28e-58,3;UBERON:0004819,3.28e-58,3;UBERON:0006553,3.28e-58,3;UBERON:0003074,3.28e-58,3;UBERON:0003060,3.28e-58,3;UBERON:0000080,4.54e-44,4;UBERON:0005904,4.54e-44,4;UBERON:0006947,4.54e-44,4;UBERON:0002120,4.54e-44,4;UBERON:0004054,4.54e-44,4;UBERON:0004875,4.54e-44,4;UBERON:0004876,4.54e-44,4;UBERON:0005721,4.54e-44,4;UBERON:0005754,4.54e-44,4;UBERON:0007297,4.54e-44,4;UBERON:0000058,7.57e-26,7;UBERON:0001343,9.50e-23,2;UBERON:0004910,9.50e-23,2;UBERON:0004909,9.50e-23,2;UBERON:0005154,9.50e-23,2;UBERON:0005295,9.50e-23,2;UBERON:0005297,9.50e-23,2;UBERON:0005294,9.50e-23,2;UBERON:0010141,9.50e-23,2;UBERON:0005891,9.50e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0003887,1.57e-18,10;UBERON:0004871,1.12e-15,3;UBERON:0002113,1.25e-13,14;UBERON:0003918,1.25e-13,14;UBERON:0011143,1.25e-13,14;UBERON:0003064,1.25e-13,14;UBERON:0005095,1.25e-13,14;UBERON:0007687,1.25e-13,14;UBERON:0003135,8.25e-13,15;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0004122,5.59e-10,5;UBERON:0000489,1.61e-09,21;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,8.8328949133166,37.4029682481839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chrX:50280126..50280140,+
}}

Revision as of 19:53, 14 September 2013

Short description:p@chrX:50280126..50280140, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:50280126..50280140, +
Coexpression cluster:MCL_coexpression_mm9:9
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25
30
35
40




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:50280126..50280140,%2B&oldid=3065871"