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FFCP PHASE1:Mm9::chrX:45245582..45245591,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=93761|HGNC=|UniProt=|association_with_transcript=17bp_to_ENSMUST00000141084_5end|description=CAGE_peak_4_at_Smarca1_5end|id=chrX:45245582..45245591,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.80e-11!71;UBERON:0003075!1.80e-11!71;UBERON:0007284!1.80e-11!71;UBERON:0003056!4.48e-10!49;UBERON:0000033!1.87e-09!63;UBERON:0001049!3.40e-09!52;UBERON:0005068!3.40e-09!52;UBERON:0006241!3.40e-09!52;UBERON:0007135!3.40e-09!52;UBERON:0004121!8.21e-09!102;UBERON:0000924!8.21e-09!102;UBERON:0006601!8.21e-09!102;UBERON:0000955!9.29e-09!50;UBERON:0006238!9.29e-09!50;UBERON:0003080!1.12e-08!40;UBERON:0002780!1.82e-08!39;UBERON:0001890!1.82e-08!39;UBERON:0006240!1.82e-08!39;UBERON:0002616!3.03e-08!49;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0000468!1.68e-07!333;UBERON:0001017!3.25e-07!73;UBERON:0005743!3.25e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.62e-14,10;UBERON:0000411,1.62e-14,10;UBERON:0001950,1.62e-14,10;UBERON:0002619,1.21e-09,17;UBERON:0000955,1.67e-09,47;UBERON:0006238,1.67e-09,47;UBERON:0001049,2.50e-09,52;UBERON:0005068,2.50e-09,52;UBERON:0006241,2.50e-09,52;UBERON:0007135,2.50e-09,52;UBERON:0000956,2.66e-09,21;UBERON:0001869,2.66e-09,21;UBERON:0000203,2.66e-09,21;UBERON:0002780,3.10e-09,39;UBERON:0001890,3.10e-09,39;UBERON:0006240,3.10e-09,39;UBERON:0003080,6.46e-09,40;UBERON:0010314,1.07e-08,92;UBERON:0002616,1.77e-08,46;UBERON:0000073,9.00e-08,54;UBERON:0002346,9.57e-08,64;UBERON:0003075,9.57e-08,64;UBERON:0007284,9.57e-08,64;UBERON:0003056,1.05e-07,49;UBERON:0003528,2.56e-07,29;UBERON:0002791,2.56e-07,29;UBERON:0001893,2.56e-07,29;UBERON:0002020,3.73e-07,34|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,1.14613375975503,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.441737081903227,0,0.383381884072945,0,0,0.255374676170375,0.921639199537461,0.527545150920775,0.182975287204819,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0.890652834388949,0.346970653532272,0.913396434936424,0.461230994512117,0.60289056221049,1.41106448562846,0.628332956648377,1.23597483867187,0,0,0.323533699894818,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,0.628271760564322,1.91206752211504,0.511430914660661,1.0389402227978,1.29793010454206,0.916554274652847,0.622034853050465,1.26361379216837,0.210441855886474,0.520481771850815,0.459804208866946,0.900310649026746,0.90422890701429,0.408218994907967,0.2562274405697,0.468508622798644,1.29351685369508,0.215567992932842,1.13463648100692,0.703804496655795,1.09597866213787,1.11218899690239,0,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,1.40715635988658,0.540186184383045,0.946978942340841,1.57411385397923,1.23413690309903,1.39520366850245,0.268273401399619,0.817357396570186,0.493679549740441,0,0,0,0,0,1.05144974282064,0.617427674275707,0,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.80673409849337,0.444756087689741,0.760902504450237,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0,0.456994050438915,2.25415471346161,0,0.775809948670503,0.771494018793504,0.442655759869801,0,0,0,0,0.500535317148282,0.982794975566015,0,0.608580364165509,0.482354319504834,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,1.86719594352707,1.17345124144251,0.502518772325447,0.476087281772027,0.195133647857799,0.472905432318573,0.8858587585951,0.318909537314974,0,0.345369963731791,0,0,0,0.983528546038072,0,0.481651769963376,1.40654023910644,0.327869890753351,0,0,0,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.99358059645788,0,0.325773918707152,0,0,0.971122544619926,0.302323556964751,0.754420319023592,1.18120757152309,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0,0.905510786479282,0.643011105094777,1.06404140185364,0.891844088010353,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.301564624640779,0,0.164140899745061,0,1.11255181206306,0,0.619160603889667,0.925972636848558,0,0,0,0,0,0,0,0.158167996790568,1.62655573701479,0.540026704109006,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,1.16670713006429,1.6790777052105,1.01373675294467,0.821500670520278,0.781226309063701,1.78260885523708,0.724752362478018,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,2.25900737046827,2.76195141904306,0.572895513439397,1.71853182343688,2.05524755931193,3.7769694869485,0.675022500231806,2.70192721934532,4.07828168085784,1.55328093525546,0.62272408550506,0.798049746802062,0.512200817262403,1.45864030240976,0.628839487883947,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.114870937911227,0.476293691283074,0.811190281613988,0.38581844092741,0,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,1.08455788830176,1.15743966588685,0,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p4@Smarca1}}
|EntrezGene=93761
|HGNC=
|UniProt=
|association_with_transcript=17bp_to_ENSMUST00000141084_5end
|description=CAGE_peak_4_at_Smarca1_5end
|id=chrX:45245582..45245591,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.80e-11!71;UBERON:0003075!1.80e-11!71;UBERON:0007284!1.80e-11!71;UBERON:0003056!4.48e-10!49;UBERON:0000033!1.87e-09!63;UBERON:0001049!3.40e-09!52;UBERON:0005068!3.40e-09!52;UBERON:0006241!3.40e-09!52;UBERON:0007135!3.40e-09!52;UBERON:0004121!8.21e-09!102;UBERON:0000924!8.21e-09!102;UBERON:0006601!8.21e-09!102;UBERON:0000955!9.29e-09!50;UBERON:0006238!9.29e-09!50;UBERON:0003080!1.12e-08!40;UBERON:0002780!1.82e-08!39;UBERON:0001890!1.82e-08!39;UBERON:0006240!1.82e-08!39;UBERON:0002616!3.03e-08!49;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0000468!1.68e-07!333;UBERON:0001017!3.25e-07!73;UBERON:0005743!3.25e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.62e-14,10;UBERON:0000411,1.62e-14,10;UBERON:0001950,1.62e-14,10;UBERON:0002619,1.21e-09,17;UBERON:0000955,1.67e-09,47;UBERON:0006238,1.67e-09,47;UBERON:0001049,2.50e-09,52;UBERON:0005068,2.50e-09,52;UBERON:0006241,2.50e-09,52;UBERON:0007135,2.50e-09,52;UBERON:0000956,2.66e-09,21;UBERON:0001869,2.66e-09,21;UBERON:0000203,2.66e-09,21;UBERON:0002780,3.10e-09,39;UBERON:0001890,3.10e-09,39;UBERON:0006240,3.10e-09,39;UBERON:0003080,6.46e-09,40;UBERON:0010314,1.07e-08,92;UBERON:0002616,1.77e-08,46;UBERON:0000073,9.00e-08,54;UBERON:0002346,9.57e-08,64;UBERON:0003075,9.57e-08,64;UBERON:0007284,9.57e-08,64;UBERON:0003056,1.05e-07,49;UBERON:0003528,2.56e-07,29;UBERON:0002791,2.56e-07,29;UBERON:0001893,2.56e-07,29;UBERON:0002020,3.73e-07,34
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,1.14613375975503,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.441737081903227,0,0.383381884072945,0,0,0.255374676170375,0.921639199537461,0.527545150920775,0.182975287204819,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0.890652834388949,0.346970653532272,0.913396434936424,0.461230994512117,0.60289056221049,1.41106448562846,0.628332956648377,1.23597483867187,0,0,0.323533699894818,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,0.628271760564322,1.91206752211504,0.511430914660661,1.0389402227978,1.29793010454206,0.916554274652847,0.622034853050465,1.26361379216837,0.210441855886474,0.520481771850815,0.459804208866946,0.900310649026746,0.90422890701429,0.408218994907967,0.2562274405697,0.468508622798644,1.29351685369508,0.215567992932842,1.13463648100692,0.703804496655795,1.09597866213787,1.11218899690239,0,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,1.40715635988658,0.540186184383045,0.946978942340841,1.57411385397923,1.23413690309903,1.39520366850245,0.268273401399619,0.817357396570186,0.493679549740441,0,0,0,0,0,1.05144974282064,0.617427674275707,0,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.80673409849337,0.444756087689741,0.760902504450237,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0,0.456994050438915,2.25415471346161,0,0.775809948670503,0.771494018793504,0.442655759869801,0,0,0,0,0.500535317148282,0.982794975566015,0,0.608580364165509,0.482354319504834,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,1.86719594352707,1.17345124144251,0.502518772325447,0.476087281772027,0.195133647857799,0.472905432318573,0.8858587585951,0.318909537314974,0,0.345369963731791,0,0,0,0.983528546038072,0,0.481651769963376,1.40654023910644,0.327869890753351,0,0,0,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.99358059645788,0,0.325773918707152,0,0,0.971122544619926,0.302323556964751,0.754420319023592,1.18120757152309,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0,0.905510786479282,0.643011105094777,1.06404140185364,0.891844088010353,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.301564624640779,0,0.164140899745061,0,1.11255181206306,0,0.619160603889667,0.925972636848558,0,0,0,0,0,0,0,0.158167996790568,1.62655573701479,0.540026704109006,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,1.16670713006429,1.6790777052105,1.01373675294467,0.821500670520278,0.781226309063701,1.78260885523708,0.724752362478018,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,2.25900737046827,2.76195141904306,0.572895513439397,1.71853182343688,2.05524755931193,3.7769694869485,0.675022500231806,2.70192721934532,4.07828168085784,1.55328093525546,0.62272408550506,0.798049746802062,0.512200817262403,1.45864030240976,0.628839487883947,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.114870937911227,0.476293691283074,0.811190281613988,0.38581844092741,0,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,1.08455788830176,1.15743966588685,0,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0.463735671240843
|short_description=p4@Smarca1
}}

Revision as of 19:49, 14 September 2013

Short description:p4@Smarca1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smarca1_5end
Coexpression cluster:NA
Association with transcript: 17bp_to_ENSMUST00000141084_5end
EntrezGene:Smarca1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smarca1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.62e-1410
visual cortex1.62e-1410
neocortex1.62e-1410
regional part of cerebral cortex1.21e-0917
brain1.67e-0947
future brain1.67e-0947
neural tube2.50e-0952
neural rod2.50e-0952
future spinal cord2.50e-0952
neural keel2.50e-0952
cerebral cortex2.66e-0921
cerebral hemisphere2.66e-0921
pallium2.66e-0921
regional part of forebrain3.10e-0939
forebrain3.10e-0939
future forebrain3.10e-0939
anterior neural tube6.46e-0940
structure with developmental contribution from neural crest1.07e-0892
regional part of brain1.77e-0846
regional part of nervous system9.00e-0854
neurectoderm9.57e-0864
neural plate9.57e-0864
presumptive neural plate9.57e-0864
pre-chordal neural plate1.05e-0749
brain grey matter2.56e-0729
regional part of telencephalon2.56e-0729
telencephalon2.56e-0729
gray matter3.73e-0734







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