FFCP PHASE1:Mm9::chrX:156380854..156380877,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58194|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=10bp_to_ENSMUST00000142426_5end|description=CAGE_peak_15_at_Sh3kbp1_5end|id=chrX:156380854..156380877,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.49e-19!18;UBERON:0000948!5.49e-19!18;UBERON:0005498!5.49e-19!18;UBERON:0004140!5.49e-19!18;UBERON:0009881!5.49e-19!18;UBERON:0004141!5.49e-19!18;UBERON:0003084!5.49e-19!18;UBERON:0007005!5.49e-19!18;UBERON:0004139!5.49e-19!18;UBERON:0004291!5.49e-19!18;UBERON:0004535!1.25e-13!23;UBERON:0001009!1.25e-13!23;UBERON:0002048!3.14e-08!14;UBERON:0000117!3.14e-08!14;UBERON:0000171!3.14e-08!14;UBERON:0000170!3.14e-08!14;UBERON:0005597!3.14e-08!14;UBERON:0000118!3.14e-08!14;UBERON:0004872!6.51e-08!33;UBERON:0003103!2.93e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.15e-65,18;UBERON:0000948,2.15e-65,18;UBERON:0005498,2.15e-65,18;UBERON:0004140,2.15e-65,18;UBERON:0009881,2.15e-65,18;UBERON:0004141,2.15e-65,18;UBERON:0003084,2.15e-65,18;UBERON:0007005,2.15e-65,18;UBERON:0004139,2.15e-65,18;UBERON:0004291,2.15e-65,18;UBERON:0004535,1.02e-50,23;UBERON:0001009,1.02e-50,23;UBERON:0004872,1.10e-34,33;UBERON:0003103,1.59e-29,43;UBERON:0003914,1.13e-23,47;UBERON:0010314,1.72e-12,92;UBERON:0003081,1.11e-11,87;UBERON:0004111,8.94e-09,122;UBERON:0000025,2.60e-08,114;UBERON:0000926,9.12e-08,120;UBERON:0004120,9.12e-08,120;UBERON:0006603,9.12e-08,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64104883049698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,10.1491628542396,10.7881987591304,12.244220179349,16.3353867553795,19.8731874064878,19.4376562238097,26.5088697015465,23.0715125203672,26.7392634020818,24.6839774870221,15.595909087514,11.8360461936949,7.30999937126662,8.12335426576887,4.42881181909227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.735374033800057,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.592302255241736,0.548783918618318,1.05227884575137,0.543216455383447,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0,0.441182838239031,0.927471342481686|short_description=p15@Sh3kbp1}} | ||
|EntrezGene=58194 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENSMUST00000142426_5end | |||
|description=CAGE_peak_15_at_Sh3kbp1_5end | |||
|id=chrX:156380854..156380877,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.49e-19!18;UBERON:0000948!5.49e-19!18;UBERON:0005498!5.49e-19!18;UBERON:0004140!5.49e-19!18;UBERON:0009881!5.49e-19!18;UBERON:0004141!5.49e-19!18;UBERON:0003084!5.49e-19!18;UBERON:0007005!5.49e-19!18;UBERON:0004139!5.49e-19!18;UBERON:0004291!5.49e-19!18;UBERON:0004535!1.25e-13!23;UBERON:0001009!1.25e-13!23;UBERON:0002048!3.14e-08!14;UBERON:0000117!3.14e-08!14;UBERON:0000171!3.14e-08!14;UBERON:0000170!3.14e-08!14;UBERON:0005597!3.14e-08!14;UBERON:0000118!3.14e-08!14;UBERON:0004872!6.51e-08!33;UBERON:0003103!2.93e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.15e-65,18;UBERON:0000948,2.15e-65,18;UBERON:0005498,2.15e-65,18;UBERON:0004140,2.15e-65,18;UBERON:0009881,2.15e-65,18;UBERON:0004141,2.15e-65,18;UBERON:0003084,2.15e-65,18;UBERON:0007005,2.15e-65,18;UBERON:0004139,2.15e-65,18;UBERON:0004291,2.15e-65,18;UBERON:0004535,1.02e-50,23;UBERON:0001009,1.02e-50,23;UBERON:0004872,1.10e-34,33;UBERON:0003103,1.59e-29,43;UBERON:0003914,1.13e-23,47;UBERON:0010314,1.72e-12,92;UBERON:0003081,1.11e-11,87;UBERON:0004111,8.94e-09,122;UBERON:0000025,2.60e-08,114;UBERON:0000926,9.12e-08,120;UBERON:0004120,9.12e-08,120;UBERON:0006603,9.12e-08,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64104883049698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,10.1491628542396,10.7881987591304,12.244220179349,16.3353867553795,19.8731874064878,19.4376562238097,26.5088697015465,23.0715125203672,26.7392634020818,24.6839774870221,15.595909087514,11.8360461936949,7.30999937126662,8.12335426576887,4.42881181909227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.735374033800057,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.592302255241736,0.548783918618318,1.05227884575137,0.543216455383447,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0,0.441182838239031,0.927471342481686 | |||
|short_description=p15@Sh3kbp1 | |||
}} |
Revision as of 19:35, 14 September 2013
Short description: | p15@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 10bp_to_ENSMUST00000142426_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.15e-65 | 18 |
heart | 2.15e-65 | 18 |
primitive heart tube | 2.15e-65 | 18 |
primary heart field | 2.15e-65 | 18 |
anterior lateral plate mesoderm | 2.15e-65 | 18 |
heart tube | 2.15e-65 | 18 |
heart primordium | 2.15e-65 | 18 |
cardiac mesoderm | 2.15e-65 | 18 |
cardiogenic plate | 2.15e-65 | 18 |
heart rudiment | 2.15e-65 | 18 |
cardiovascular system | 1.02e-50 | 23 |
circulatory system | 1.02e-50 | 23 |
splanchnic layer of lateral plate mesoderm | 1.10e-34 | 33 |
compound organ | 1.59e-29 | 43 |
epithelial tube | 1.13e-23 | 47 |
structure with developmental contribution from neural crest | 1.72e-12 | 92 |
lateral plate mesoderm | 1.11e-11 | 87 |
anatomical conduit | 8.94e-09 | 122 |
tube | 2.60e-08 | 114 |
mesoderm | 9.12e-08 | 120 |
mesoderm-derived structure | 9.12e-08 | 120 |
presumptive mesoderm | 9.12e-08 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.