Personal tools

FFCP PHASE1:Mm9::chrX:156065167..156065190,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=58194|HGNC=|UniProt=Q8R550|association_with_transcript=-13bp_to_ENSMUST00000112456_5end|description=CAGE_peak_7_at_Sh3kbp1_5end|id=chrX:156065167..156065190,+|ontology_enrichment_celltype=CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.00e-08!45;UBERON:0003061!1.00e-08!45;UBERON:0002193!1.49e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.27e-08,45;UBERON:0003061,1.27e-08,45;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48|phase1_expression=1.92178616525753,2.09385244583617,1.81999695755814,0,0,1.34303417529512,0.467225281191051,3.22808308603941,0.563154888606667,0.70219357896598,1.02730780935303,0.398860794976682,1.88320802924326,3.4968160967599,3.99731714178795,1.41732687172878,1.39912375625629,5.8360500591274,7.40417941470989,6.36584477697045,2.12608225377674,1.29078236561151,2.35079810225042,0.95995453676044,1.60586496747019,2.29692785646008,2.15380998079537,3.44753972297422,0,0,0.886922042621219,0,0,0,0.577703239502549,0.166234645358492,0,17.1597968602132,14.8453715459522,10.470474879476,17.0587131528994,18.442228093878,19.4204141212461,1.25896817975577,2.23029248682932,2.0190142737785,0,0.65407546914134,0.219686182734472,0.194429899074283,1.1198913730029,2.87505128729943,5.87239121202077,2.90144856804538,3.36093799142464,1.54355661621568,1.43266719969378,0.515672092277442,1.01158230429799,3.70293685490423,1.90149421051854,1.35537812827653,0.889294796111139,4.04954872776629,4.94433181283487,3.5524005747305,0.898800331555214,1.53687322128622,4.04389488003063,2.97013064329719,2.3135745748652,5.99867067247988,5.07997644188711,1.10241719293459,0.862609239164127,2.75765635983006,7.70811166995721,5.10749352340751,4.76180253094355,2.2420668914133,1.18933936683133,5.73004707612436,4.18774498502071,4.50210088025344,3.97275444219706,6.18720029494702,5.55249555116501,3.54158947068071,2.27178579999552,3.92972112555285,2.31891590961342,0,0,0,0.649776417447669,0,1.96622188184453,5.79463096765396,2.59786004602869,2.82671659608272,1.26759077799012,5.13305909657271,2.54805239706646,14.2213340630666,6.71122227134764,8.61423542615335,8.59391556525132,1.37020655662872,6.99132285847364,1.03909497345377,1.04091196059682,0.304465478312141,0.922461989024234,0.301445281105245,1.52865319276416,1.13099932196708,0,4.77177877835708,2.65383165584962,4.52947179852746,3.97514733228708,3.39412677194655,1.86391761218122,0.292780797011547,0.628340120440365,0.510914110417183,3.11519323715393,2.39961092397363,2.41433431438823,1.3481157546434,1.83000241127451,2.1361239859187,1.56441888173049,3.06858548796397,2.28566849015516,4.05603157669394,4.17541391786297,3.98102305952298,0,0.631325567659422,1.43132487258974,2.5289231487682,1.80062129805349,2.10986744970001,1.49680298132921,1.2811372028485,2.24884138943349,1.29351685369508,1.29340795759705,2.45837904218165,2.28736461413134,1.53437012699302,1.11218899690239,2.089512999133,1.02891068203972,1.39323986772945,1.40442637462647,4.11756651383544,3.9782889915383,1.44988040774851,1.17263029990548,1.44049649168812,2.60419209143731,2.16440654922144,1.69693824176116,0.465067889500816,0,1.5179494507732,2.63295759861569,0.985004784474571,0.972825714550269,0.730999937126662,1.09775057645525,2.14730270016595,2.3131894342054,3.2929475961371,0,0,2.13288250535234,3.0190767341857,0.902072229254653,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.19496408711912,0,0.864552199498777,1.39398891278057,1.51734320762465,1.94222471436539,0,0.814605311381257,0.581857461502877,2.10407459670956,2.27651533647326,1.03327103585722,1.56998727841375,0.987177311374404,0.889357881261447,1.50160595144485,1.17935397067922,0.674586337154561,1.21716072833102,1.92941727801933,0.25462585178142,0.575392274901621,0.486405680325106,0.823684239564244,0,0.744281895337007,1.24815069245824,1.01031551178845,0.358794827043824,0.482443521363367,1.84753190166605,0.947457058852424,2.60743962307241,1.69745085775188,1.40814148973101,3.01511263395268,0.714130922658041,1.95133647857799,2.83743259391144,1.99318220683897,3.02964060449226,1.14704320301017,2.41758974612254,1.01254341007058,15.0791283939272,17.9488875660174,0.491764273019036,1.37968373152366,1.44495530989013,1.40654023910644,0.819674726883377,1.00988370881749,4.41711507182759,4.29482618726302,2.15423397732799,3.34556317133573,2.45078541490634,3.67999490025482,4.04810701674894,5.84511715822624,3.55759000151871,2.24924921495265,1.84522110770749,1.24645922567079,2.93196526836437,2.14461159864296,0,0.728341908464944,1.51161778482376,0.377210159511796,2.06711325016541,1.53717573971964,0.775284879504663,1.45413491791002,0.712994756769443,1.58018378967908,0,0,0.340439605753788,1.44048875225048,1.03486947026204,1.07168517515796,1.06404140185364,1.07021290561242,1.97458824722545,1.2178597964584,0.938686832254841,2.1183207086382,0.441056796109924,1.31909002353184,1.45317984026315,2.89502039655148,1.43246812803764,2.62625439592098,1.45740418314925,1.66882771809459,3.75915937755276,2.68302928352189,2.77791791054568,2.63715839806567,3.2806614653046,3.66045077130436,2.54967644990783,1.81936888020755,3.04039942369732,0,2.68885594543965,1.62655573701479,0.972048067396211,1.25452977608681,0.436725127492355,1.21377911746339,2.14898984885873,1.04702376793612,0.90730481304255,0.621339313086926,0,1.64468200648377,0.992750942742586,1.94451188344048,1.80823752868824,1.68956125490778,3.0512882047896,2.3436789271911,1.04859344425711,0.241584120826006,0,4.10814456816632,2.63542779877213,2.05421914329655,2.20865399062252,2.50637373934474,4.76835251475036,5.52899067791857,4.72606486958647,5.65412119709627,5.25826965919499,6.45287584875779,5.55509920216589,4.81059208201647,4.20756847853648,0.226730383615211,0.443971906748129,0.0897138566094757,0.167884616364078,1.54551675225752,1.68914227906064,2.01466786693992,2.57242054894879,1.00314420807073,3.3885110557024,4.60325236507177,2.86447756719698,2.23409137046794,4.11049511862385,2.2661816921691,2.70009000092722,3.15224842256954,3.62513927187364,3.10656187051092,1.55681021376265,1.59609949360412,1.19513524027894,0.729320151204882,1.46729213839588,2.5738091183002,1.77797382241292,2.88449080134452,2.88827288632634,1.51618327058278,1.2673964994512,2.64076877940507,2.43467919421694,2.4969809437899,3.10151532360312,4.28664322154766,2.31768651889711,3.27945674788299,3.29668720642645,2.35518272215036,1.37147700954166,3.01708870470874,1.1921809497366,2.18019624948493,2.4468438907986,2.03075058940024,1.64635175585495,3.94604567156764,2.58027816307137,2.24456908663095,5.21994079746366,3.64466584789585,4.91077251803627,2.16911577660352,2.12197272079256,1.74867404556562,1.63752125911786,1.93383948643468,1.3390183244819,1.98532277207564,3.47801753430632|short_description=p7@Sh3kbp1}}
|EntrezGene=58194
|HGNC=
|UniProt=Q8R550
|association_with_transcript=-13bp_to_ENSMUST00000112456_5end
|description=CAGE_peak_7_at_Sh3kbp1_5end
|id=chrX:156065167..156065190,+
|ontology_enrichment_celltype=CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!1.00e-08!45;UBERON:0003061!1.00e-08!45;UBERON:0002193!1.49e-08!48
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.27e-08,45;UBERON:0003061,1.27e-08,45;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48
|phase1_expression=1.92178616525753,2.09385244583617,1.81999695755814,0,0,1.34303417529512,0.467225281191051,3.22808308603941,0.563154888606667,0.70219357896598,1.02730780935303,0.398860794976682,1.88320802924326,3.4968160967599,3.99731714178795,1.41732687172878,1.39912375625629,5.8360500591274,7.40417941470989,6.36584477697045,2.12608225377674,1.29078236561151,2.35079810225042,0.95995453676044,1.60586496747019,2.29692785646008,2.15380998079537,3.44753972297422,0,0,0.886922042621219,0,0,0,0.577703239502549,0.166234645358492,0,17.1597968602132,14.8453715459522,10.470474879476,17.0587131528994,18.442228093878,19.4204141212461,1.25896817975577,2.23029248682932,2.0190142737785,0,0.65407546914134,0.219686182734472,0.194429899074283,1.1198913730029,2.87505128729943,5.87239121202077,2.90144856804538,3.36093799142464,1.54355661621568,1.43266719969378,0.515672092277442,1.01158230429799,3.70293685490423,1.90149421051854,1.35537812827653,0.889294796111139,4.04954872776629,4.94433181283487,3.5524005747305,0.898800331555214,1.53687322128622,4.04389488003063,2.97013064329719,2.3135745748652,5.99867067247988,5.07997644188711,1.10241719293459,0.862609239164127,2.75765635983006,7.70811166995721,5.10749352340751,4.76180253094355,2.2420668914133,1.18933936683133,5.73004707612436,4.18774498502071,4.50210088025344,3.97275444219706,6.18720029494702,5.55249555116501,3.54158947068071,2.27178579999552,3.92972112555285,2.31891590961342,0,0,0,0.649776417447669,0,1.96622188184453,5.79463096765396,2.59786004602869,2.82671659608272,1.26759077799012,5.13305909657271,2.54805239706646,14.2213340630666,6.71122227134764,8.61423542615335,8.59391556525132,1.37020655662872,6.99132285847364,1.03909497345377,1.04091196059682,0.304465478312141,0.922461989024234,0.301445281105245,1.52865319276416,1.13099932196708,0,4.77177877835708,2.65383165584962,4.52947179852746,3.97514733228708,3.39412677194655,1.86391761218122,0.292780797011547,0.628340120440365,0.510914110417183,3.11519323715393,2.39961092397363,2.41433431438823,1.3481157546434,1.83000241127451,2.1361239859187,1.56441888173049,3.06858548796397,2.28566849015516,4.05603157669394,4.17541391786297,3.98102305952298,0,0.631325567659422,1.43132487258974,2.5289231487682,1.80062129805349,2.10986744970001,1.49680298132921,1.2811372028485,2.24884138943349,1.29351685369508,1.29340795759705,2.45837904218165,2.28736461413134,1.53437012699302,1.11218899690239,2.089512999133,1.02891068203972,1.39323986772945,1.40442637462647,4.11756651383544,3.9782889915383,1.44988040774851,1.17263029990548,1.44049649168812,2.60419209143731,2.16440654922144,1.69693824176116,0.465067889500816,0,1.5179494507732,2.63295759861569,0.985004784474571,0.972825714550269,0.730999937126662,1.09775057645525,2.14730270016595,2.3131894342054,3.2929475961371,0,0,2.13288250535234,3.0190767341857,0.902072229254653,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.19496408711912,0,0.864552199498777,1.39398891278057,1.51734320762465,1.94222471436539,0,0.814605311381257,0.581857461502877,2.10407459670956,2.27651533647326,1.03327103585722,1.56998727841375,0.987177311374404,0.889357881261447,1.50160595144485,1.17935397067922,0.674586337154561,1.21716072833102,1.92941727801933,0.25462585178142,0.575392274901621,0.486405680325106,0.823684239564244,0,0.744281895337007,1.24815069245824,1.01031551178845,0.358794827043824,0.482443521363367,1.84753190166605,0.947457058852424,2.60743962307241,1.69745085775188,1.40814148973101,3.01511263395268,0.714130922658041,1.95133647857799,2.83743259391144,1.99318220683897,3.02964060449226,1.14704320301017,2.41758974612254,1.01254341007058,15.0791283939272,17.9488875660174,0.491764273019036,1.37968373152366,1.44495530989013,1.40654023910644,0.819674726883377,1.00988370881749,4.41711507182759,4.29482618726302,2.15423397732799,3.34556317133573,2.45078541490634,3.67999490025482,4.04810701674894,5.84511715822624,3.55759000151871,2.24924921495265,1.84522110770749,1.24645922567079,2.93196526836437,2.14461159864296,0,0.728341908464944,1.51161778482376,0.377210159511796,2.06711325016541,1.53717573971964,0.775284879504663,1.45413491791002,0.712994756769443,1.58018378967908,0,0,0.340439605753788,1.44048875225048,1.03486947026204,1.07168517515796,1.06404140185364,1.07021290561242,1.97458824722545,1.2178597964584,0.938686832254841,2.1183207086382,0.441056796109924,1.31909002353184,1.45317984026315,2.89502039655148,1.43246812803764,2.62625439592098,1.45740418314925,1.66882771809459,3.75915937755276,2.68302928352189,2.77791791054568,2.63715839806567,3.2806614653046,3.66045077130436,2.54967644990783,1.81936888020755,3.04039942369732,0,2.68885594543965,1.62655573701479,0.972048067396211,1.25452977608681,0.436725127492355,1.21377911746339,2.14898984885873,1.04702376793612,0.90730481304255,0.621339313086926,0,1.64468200648377,0.992750942742586,1.94451188344048,1.80823752868824,1.68956125490778,3.0512882047896,2.3436789271911,1.04859344425711,0.241584120826006,0,4.10814456816632,2.63542779877213,2.05421914329655,2.20865399062252,2.50637373934474,4.76835251475036,5.52899067791857,4.72606486958647,5.65412119709627,5.25826965919499,6.45287584875779,5.55509920216589,4.81059208201647,4.20756847853648,0.226730383615211,0.443971906748129,0.0897138566094757,0.167884616364078,1.54551675225752,1.68914227906064,2.01466786693992,2.57242054894879,1.00314420807073,3.3885110557024,4.60325236507177,2.86447756719698,2.23409137046794,4.11049511862385,2.2661816921691,2.70009000092722,3.15224842256954,3.62513927187364,3.10656187051092,1.55681021376265,1.59609949360412,1.19513524027894,0.729320151204882,1.46729213839588,2.5738091183002,1.77797382241292,2.88449080134452,2.88827288632634,1.51618327058278,1.2673964994512,2.64076877940507,2.43467919421694,2.4969809437899,3.10151532360312,4.28664322154766,2.31768651889711,3.27945674788299,3.29668720642645,2.35518272215036,1.37147700954166,3.01708870470874,1.1921809497366,2.18019624948493,2.4468438907986,2.03075058940024,1.64635175585495,3.94604567156764,2.58027816307137,2.24456908663095,5.21994079746366,3.64466584789585,4.91077251803627,2.16911577660352,2.12197272079256,1.74867404556562,1.63752125911786,1.93383948643468,1.3390183244819,1.98532277207564,3.47801753430632
|short_description=p7@Sh3kbp1
}}

Revision as of 19:34, 14 September 2013

Short description:p7@Sh3kbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Sh3kbp1_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000112456_5end
EntrezGene:Sh3kbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Sh3kbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C45.65
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A25.56
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.21e-0733
neuronal stem cell1.21e-0733
neuroblast1.21e-0733
electrically signaling cell1.21e-0733

Uber anatomy
Ontology termp-valuen
hematopoietic system1.27e-0845
blood island1.27e-0845
hemolymphoid system2.57e-0848
immune system2.57e-0848







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:156065167..156065190,%2B&oldid=3065043"