FFCP PHASE1:Mm9::chrM:1248..1266,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=89|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrM:1248..1266,-|id=chrM:1248..1266,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002321,2.57e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.25e-07!10;UBERON:0000411!2.25e-07!10;UBERON:0001950!2.25e-07!10;UBERON:0000025!2.62e-07!114;UBERON:0003103!4.36e-07!43;UBERON:0002020!7.06e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.99e-08,10;UBERON:0000411,8.99e-08,10;UBERON:0001950,8.99e-08,10;UBERON:0010314,9.96e-08,92;UBERON:0003103,2.53e-07,43;UBERON:0002020,4.59e-07,34;UBERON:0001017,5.36e-07,73;UBERON:0000025,6.58e-07,114|phase1_expression=0.640595388419176,1.39590163055744,2.27499619694768,1.81478526784098,9.01612313903425,0.33575854382378,2.56973904655078,0.516493293766305,0.84473233291,0.70219357896598,0.34243593645101,0.319088635981346,0.342401459862411,0.611942816932982,5.66286595086627,0.607425802169478,1.39912375625629,0.630924330716475,0.822686601634433,2.97072756258621,0.935476191661768,2.87943758482567,0.261199789138935,1.43993180514066,2.06468352960453,3.44539178469012,1.29228598847722,0.861884930743556,3.42042155021473,0.252030129759931,0,0,1.23012957516914,0,1.73310971850765,1.49611180822643,2.24586291888606,0,0,0,0,0.683045484958446,0,2.26614272356039,1.11514624341466,0.734187008646726,7.82391344348039,1.30815093828268,2.85592037554813,3.69416808241138,1.25987779462826,0,1.67782606057736,2.17608642603403,1.34437519656986,2.82985379639542,2.0057340795713,4.12537673821954,2.22548106945558,0,0.633831403506179,1.0165335962074,0,1.3498495759221,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,5.39185984004084,1.35005938331691,3.36519938162211,5.14171771926846,2.20868540951614,1.34739879136449,0.670918297127655,0,52.8556228797066,14.4286692036262,18.7399970572617,1.71452174049252,0.640413505216868,2.08365348222704,10.6089539620525,19.1339287410771,24.7533161398432,21.2132581541041,6.26435395516053,4.84638559145781,0.530083353332288,0.529000920747499,0.869593466105033,5.16254326188832,19.7191686775248,45.8747712892145,79.2727229286156,11.2006721774334,2.10666630197628,0.511290967734173,2.85764605063156,10.9535268098205,0.563373679106722,0,2.54805239706646,0,9.95858788651585,9.37431502257865,10.6160133453104,2.8545969929765,0.517875767294343,1.1875371125186,1.56136794089522,2.43572382649713,1.38369298353635,5.57673770044703,1.99900802130698,2.26199864393416,0.494389935468748,1.01219549843938,0,1.61766849947409,1.98757366614354,6.30337829075789,0,0.585561594023094,1.25668024088073,0.255457055208591,0.718890747035522,0,0.635351135365324,1.64769703345305,2.28750301409313,0.879580464790051,0.347648640384553,4.09144731728529,1.0389402227978,2.92034273521964,0.81471491080253,0.995255764880744,1.76905930903572,0.420883711772948,1.17108398666433,0.229902104433473,0.180062129805349,1.65775299619287,0.612328492361951,0.512454881139399,1.21812241927647,0.776110112217047,0.646703978798527,1.32374256117473,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,0.205782136407943,2.38841120182192,0.702213187313235,0,1.98914449576915,0.828503090142008,1.64168241986767,3.96136535214233,1.42046841351126,1.37734962223183,7.25055430570678,8.13868806626427,3.21928081679543,6.77238985729583,7.89887279584706,23.4759473633106,5.18840381093477,11.1111990443253,23.7114124514335,17.5810408576087,1.26173969138476,0.617427674275707,3.30418782983798,1.58670339998127,1.91959425481711,2.78684006232526,0.515469845288373,1.4117846723634,0.667134131534611,0.951128130562796,2.84717436926707,3.29397909448022,4.52403375840485,1.59165177632921,0.779856348476481,0.898819408654221,7.99710784536369,1.7922714592893,0.189667900953082,2.39921876480431,0,3.46207257337034,2.71533482034676,1.8936671370386,1.3279672796094,2.36176236767363,14.2868842335651,6.78684401569903,1.48226313543574,0,0.786235980452812,0.224862112384854,0.202860121388503,0.72353147925725,1.01850340712568,0.863088412352432,4.21551589615092,9.88421087477093,127.953703809346,1.86070473834252,9.98520553966594,5.30415643688935,3.40855085691633,4.3419916922703,0.739012760666419,0.37898282354097,0.488894929326078,2.71592137240301,0.704070744865506,0,0,0.975668239288994,0.472905432318573,1.32878813789265,0.637819074629948,1.47476983244164,2.93564469172023,1.01254341007058,3.01582567878545,29.3709069262103,0.491764273019036,0.275936746304732,1.9266070798535,2.69586879162067,2.62295912602681,4.54447668967871,4.41711507182759,2.73307121007647,4.73931475012158,4.06246956519338,7.12955757063661,1.98153571552183,5.26253912177363,7.01414058987149,3.55759000151871,1.28528526568723,0.425820255624806,0,1.14020871547503,0,0,3.15614827001476,1.81394134178851,2.26326095707078,0,0,0.258428293168221,1.09060118843252,1.42598951353889,1.26414703174326,1.05418608574999,3.09406629744561,0.340439605753788,3.42116078659489,0.129358683782755,1.2860222101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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=89 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrM:1248..1266,- | |||
|id=chrM:1248..1266,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.57e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.25e-07!10;UBERON:0000411!2.25e-07!10;UBERON:0001950!2.25e-07!10;UBERON:0000025!2.62e-07!114;UBERON:0003103!4.36e-07!43;UBERON:0002020!7.06e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.99e-08,10;UBERON:0000411,8.99e-08,10;UBERON:0001950,8.99e-08,10;UBERON:0010314,9.96e-08,92;UBERON:0003103,2.53e-07,43;UBERON:0002020,4.59e-07,34;UBERON:0001017,5.36e-07,73;UBERON:0000025,6.58e-07,114 | |||
|phase1_expression=0.640595388419176,1.39590163055744,2.27499619694768,1.81478526784098,9.01612313903425,0.33575854382378,2.56973904655078,0.516493293766305,0.84473233291,0.70219357896598,0.34243593645101,0.319088635981346,0.342401459862411,0.611942816932982,5.66286595086627,0.607425802169478,1.39912375625629,0.630924330716475,0.822686601634433,2.97072756258621,0.935476191661768,2.87943758482567,0.261199789138935,1.43993180514066,2.06468352960453,3.44539178469012,1.29228598847722,0.861884930743556,3.42042155021473,0.252030129759931,0,0,1.23012957516914,0,1.73310971850765,1.49611180822643,2.24586291888606,0,0,0,0,0.683045484958446,0,2.26614272356039,1.11514624341466,0.734187008646726,7.82391344348039,1.30815093828268,2.85592037554813,3.69416808241138,1.25987779462826,0,1.67782606057736,2.17608642603403,1.34437519656986,2.82985379639542,2.0057340795713,4.12537673821954,2.22548106945558,0,0.633831403506179,1.0165335962074,0,1.3498495759221,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,5.39185984004084,1.35005938331691,3.36519938162211,5.14171771926846,2.20868540951614,1.34739879136449,0.670918297127655,0,52.8556228797066,14.4286692036262,18.7399970572617,1.71452174049252,0.640413505216868,2.08365348222704,10.6089539620525,19.1339287410771,24.7533161398432,21.2132581541041,6.26435395516053,4.84638559145781,0.530083353332288,0.529000920747499,0.869593466105033,5.16254326188832,19.7191686775248,45.8747712892145,79.2727229286156,11.2006721774334,2.10666630197628,0.511290967734173,2.85764605063156,10.9535268098205,0.563373679106722,0,2.54805239706646,0,9.95858788651585,9.37431502257865,10.6160133453104,2.8545969929765,0.517875767294343,1.1875371125186,1.56136794089522,2.43572382649713,1.38369298353635,5.57673770044703,1.99900802130698,2.26199864393416,0.494389935468748,1.01219549843938,0,1.61766849947409,1.98757366614354,6.30337829075789,0,0.585561594023094,1.25668024088073,0.255457055208591,0.718890747035522,0,0.635351135365324,1.64769703345305,2.28750301409313,0.879580464790051,0.347648640384553,4.09144731728529,1.0389402227978,2.92034273521964,0.81471491080253,0.995255764880744,1.76905930903572,0.420883711772948,1.17108398666433,0.229902104433473,0.180062129805349,1.65775299619287,0.612328492361951,0.512454881139399,1.21812241927647,0.776110112217047,0.646703978798527,1.32374256117473,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,0.205782136407943,2.38841120182192,0.702213187313235,0,1.98914449576915,0.828503090142008,1.64168241986767,3.96136535214233,1.42046841351126,1.37734962223183,7.25055430570678,8.13868806626427,3.21928081679543,6.77238985729583,7.89887279584706,23.4759473633106,5.18840381093477,11.1111990443253,23.7114124514335,17.5810408576087,1.26173969138476,0.617427674275707,3.30418782983798,1.58670339998127,1.91959425481711,2.78684006232526,0.515469845288373,1.4117846723634,0.667134131534611,0.951128130562796,2.84717436926707,3.29397909448022,4.52403375840485,1.59165177632921,0.779856348476481,0.898819408654221,7.99710784536369,1.7922714592893,0.189667900953082,2.39921876480431,0,3.46207257337034,2.71533482034676,1.8936671370386,1.3279672796094,2.36176236767363,14.2868842335651,6.78684401569903,1.48226313543574,0,0.786235980452812,0.224862112384854,0.202860121388503,0.72353147925725,1.01850340712568,0.863088412352432,4.21551589615092,9.88421087477093,127.953703809346,1.86070473834252,9.98520553966594,5.30415643688935,3.40855085691633,4.3419916922703,0.739012760666419,0.37898282354097,0.488894929326078,2.71592137240301,0.704070744865506,0,0,0.975668239288994,0.472905432318573,1.32878813789265,0.637819074629948,1.47476983244164,2.93564469172023,1.01254341007058,3.01582567878545,29.3709069262103,0.491764273019036,0.275936746304732,1.9266070798535,2.69586879162067,2.62295912602681,4.54447668967871,4.41711507182759,2.73307121007647,4.73931475012158,4.06246956519338,7.12955757063661,1.98153571552183,5.26253912177363,7.01414058987149,3.55759000151871,1.28528526568723,0.425820255624806,0,1.14020871547503,0,0,3.15614827001476,1.81394134178851,2.26326095707078,0,0,0.258428293168221,1.09060118843252,1.42598951353889,1.26414703174326,1.05418608574999,3.09406629744561,0.340439605753788,3.42116078659489,0.129358683782755,1.28602221018955,0.532020700926821,0.891844088010353,1.48094118541909,0.608929898229199,0.704015124191131,0.63549621259146,0,0.49465875882444,0.484393280087717,0.0603129249281559,1.19372344003136,0.820704498725306,4.08073171281791,1.66882771809459,0.683483523191411,0.412773735926445,1.85194527369712,1.31857919903284,0.546776910884101,1.14389086603261,0.509935289981566,0.279902904647316,0.276399947608848,0.954670618015114,0.949007980743406,0.203319467126849,2.26811215725783,1.67270636811575,2.18362563746178,3.77620169877498,0.743881101528023,1.30877970992015,3.36998930558661,1.86401793926078,0.56369293868419,0.747582730219894,0.992750942742586,0.777804753376191,1.42075805825504,2.87225413334323,1.5256441023948,0.911430693907651,0.629156066554265,4.10693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| |||
|short_description=p@chrM:1248..1266,- | |||
}} | |||
Revision as of 19:06, 14 September 2013
| Short description: | p@chrM:1248..1266, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chrM:1248..1266, - |
| Coexpression cluster: | MCL_coexpression_mm9:89 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 2.57e-07 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 8.99e-08 | 10 |
| visual cortex | 8.99e-08 | 10 |
| neocortex | 8.99e-08 | 10 |
| structure with developmental contribution from neural crest | 9.96e-08 | 92 |
| compound organ | 2.53e-07 | 43 |
| gray matter | 4.59e-07 | 34 |
| central nervous system | 5.36e-07 | 73 |
| tube | 6.58e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
