FFCP PHASE1:Mm9::chr9:95654534..95654548,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=574|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:95654534..95654548,-|id=chr9:95654534..95654548,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,4.95e-09,7;CL:0000066,5.87e-09,25;CL:0002563,8.16e-09,9;CL:0002251,8.16e-09,9;CL:0002076,9.29e-08,15;CL:0000239,1.06e-07,6;CL:0000677,1.06e-07,6;CL:0000584,1.06e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.19e-18!59;UBERON:0000160!1.62e-18!43;UBERON:0001007!1.86e-14!128;UBERON:0001555!1.86e-14!128;UBERON:0007026!1.86e-14!128;UBERON:0004119!2.82e-14!130;UBERON:0000925!2.82e-14!130;UBERON:0006595!2.82e-14!130;UBERON:0004921!2.37e-13!126;UBERON:0004185!2.37e-13!126;UBERON:0000344!8.33e-11!15;UBERON:0001242!1.98e-09!13;UBERON:0000060!1.98e-09!13;UBERON:0001262!1.98e-09!13;UBERON:0004786!1.98e-09!13;UBERON:0000485!2.00e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.83e-34,31;UBERON:0005409,9.05e-30,47;UBERON:0000344,1.48e-18,15;UBERON:0001242,1.88e-15,13;UBERON:0001262,1.88e-15,13;UBERON:0004786,1.88e-15,13;UBERON:0001007,3.96e-15,116;UBERON:0001555,3.96e-15,116;UBERON:0007026,3.96e-15,116;UBERON:0004119,1.05e-14,118;UBERON:0000925,1.05e-14,118;UBERON:0006595,1.05e-14,118;UBERON:0004921,2.47e-13,114;UBERON:0004923,4.05e-12,24;UBERON:0000485,4.67e-09,11;UBERON:0003350,8.16e-09,9;UBERON:0004808,8.16e-09,9;UBERON:0001277,8.16e-09,9;UBERON:0002108,1.42e-08,4;UBERON:0000331,9.54e-07,3;UBERON:0002116,9.54e-07,3;UBERON:0001204,9.54e-07,3;UBERON:0001168,9.54e-07,3|phase1_expression=0.960893082628764,4.18770489167233,3.63999391511629,9.37639055051173,14.0250804384977,0.33575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,3.99981056983517,7.11168771308227,4.59385571292016,6.8921919385452,2.80112602491656,19.9524590429193,12.8535366177565,4.8780712344167,0,0,0,1.1554064790051,1.82858109894342,0.816677425049476,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,3.30347642998166,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0,0.45839474333043,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,2.11265129665021,0,0,0,1.08245520505607,2.53359865475099,0.505524445014783,3.76806803072898,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,1.86391761218122,0,0.209446706813455,18.9038220854358,0,0,0,0.299581278809645,0,0,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,23.7901523748335,6.34681359992506,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,4.00280478920767,3.61428689613862,21.353807769503,13.8347121968169,9.29940272560997,12.9321706826748,8.96834800747953,15.2799299471218,30.2593269824572,19.1175622324193,0,0.114248512609729,2.25415471346161,0.203651327845314,0.581857461502877,0.280543279561274,0.442655759869801,1.91893192373483,1.56998727841375,1.60416313098341,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,1.37280706594041,1.43768206527355,0.744281895337007,1.24815069245824,0,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,1.32023555829129,0.590603785761546,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.857348140126369,0.354680467284547,0,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0,18.6547735443104,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,15.2747298882418,0,0.203319467126849,0.972048067396211,1.25452977608681,1.31017538247707,0.944050424693745,0.661227645802687,1.83229159388821,8.68420321055012,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.21635129174099,1.33524244314275,0.77952493786677,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0,0,0.551530525350042,0.666740183404846,0.412070114477788,0,0.758091635291392,0.50695859978048,0,0.280924522409647,0.448176066834085,0.229741875822453,0,0.695305955669133,0.578727661391115,0.412085900803307,0.441596760403192,0,0.354951612318675,0.953744759789284,0.726732083161643,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0,0,0.441182838239031,0|short_description=p@chr9:95654534..95654548,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=574 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:95654534..95654548,- | |||
|id=chr9:95654534..95654548,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,4.95e-09,7;CL:0000066,5.87e-09,25;CL:0002563,8.16e-09,9;CL:0002251,8.16e-09,9;CL:0002076,9.29e-08,15;CL:0000239,1.06e-07,6;CL:0000677,1.06e-07,6;CL:0000584,1.06e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.19e-18!59;UBERON:0000160!1.62e-18!43;UBERON:0001007!1.86e-14!128;UBERON:0001555!1.86e-14!128;UBERON:0007026!1.86e-14!128;UBERON:0004119!2.82e-14!130;UBERON:0000925!2.82e-14!130;UBERON:0006595!2.82e-14!130;UBERON:0004921!2.37e-13!126;UBERON:0004185!2.37e-13!126;UBERON:0000344!8.33e-11!15;UBERON:0001242!1.98e-09!13;UBERON:0000060!1.98e-09!13;UBERON:0001262!1.98e-09!13;UBERON:0004786!1.98e-09!13;UBERON:0000485!2.00e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.83e-34,31;UBERON:0005409,9.05e-30,47;UBERON:0000344,1.48e-18,15;UBERON:0001242,1.88e-15,13;UBERON:0001262,1.88e-15,13;UBERON:0004786,1.88e-15,13;UBERON:0001007,3.96e-15,116;UBERON:0001555,3.96e-15,116;UBERON:0007026,3.96e-15,116;UBERON:0004119,1.05e-14,118;UBERON:0000925,1.05e-14,118;UBERON:0006595,1.05e-14,118;UBERON:0004921,2.47e-13,114;UBERON:0004923,4.05e-12,24;UBERON:0000485,4.67e-09,11;UBERON:0003350,8.16e-09,9;UBERON:0004808,8.16e-09,9;UBERON:0001277,8.16e-09,9;UBERON:0002108,1.42e-08,4;UBERON:0000331,9.54e-07,3;UBERON:0002116,9.54e-07,3;UBERON:0001204,9.54e-07,3;UBERON:0001168,9.54e-07,3 | |||
|phase1_expression=0.960893082628764,4.18770489167233,3.63999391511629,9.37639055051173,14.0250804384977,0.33575854382378,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,3.99981056983517,7.11168771308227,4.59385571292016,6.8921919385452,2.80112602491656,19.9524590429193,12.8535366177565,4.8780712344167,0,0,0,1.1554064790051,1.82858109894342,0.816677425049476,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,3.30347642998166,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0,0.45839474333043,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,2.11265129665021,0,0,0,1.08245520505607,2.53359865475099,0.505524445014783,3.76806803072898,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,1.86391761218122,0,0.209446706813455,18.9038220854358,0,0,0,0.299581278809645,0,0,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,23.7901523748335,6.34681359992506,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,4.00280478920767,3.61428689613862,21.353807769503,13.8347121968169,9.29940272560997,12.9321706826748,8.96834800747953,15.2799299471218,30.2593269824572,19.1175622324193,0,0.114248512609729,2.25415471346161,0.203651327845314,0.581857461502877,0.280543279561274,0.442655759869801,1.91893192373483,1.56998727841375,1.60416313098341,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,1.37280706594041,1.43768206527355,0.744281895337007,1.24815069245824,0,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,1.32023555829129,0.590603785761546,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.857348140126369,0.354680467284547,0,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0,18.6547735443104,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,15.2747298882418,0,0.203319467126849,0.972048067396211,1.25452977608681,1.31017538247707,0.944050424693745,0.661227645802687,1.83229159388821,8.68420321055012,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.21635129174099,1.33524244314275,0.77952493786677,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0,0,0.551530525350042,0.666740183404846,0.412070114477788,0,0.758091635291392,0.50695859978048,0,0.280924522409647,0.448176066834085,0.229741875822453,0,0.695305955669133,0.578727661391115,0.412085900803307,0.441596760403192,0,0.354951612318675,0.953744759789284,0.726732083161643,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr9:95654534..95654548,- | |||
}} |
Revision as of 19:01, 14 September 2013
Short description: | p@chr9:95654534..95654548, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:95654534..95654548, - |
Coexpression cluster: | MCL_coexpression_mm9:574 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 4.95e-09 | 7 |
epithelial cell | 5.87e-09 | 25 |
intestinal epithelial cell | 8.16e-09 | 9 |
epithelial cell of alimentary canal | 8.16e-09 | 9 |
endo-epithelial cell | 9.29e-08 | 15 |
brush border epithelial cell | 1.06e-07 | 6 |
gut absorptive cell | 1.06e-07 | 6 |
enterocyte | 1.06e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.83e-34 | 31 |
gastrointestinal system | 9.05e-30 | 47 |
mucosa | 1.48e-18 | 15 |
intestinal mucosa | 1.88e-15 | 13 |
wall of intestine | 1.88e-15 | 13 |
gastrointestinal system mucosa | 1.88e-15 | 13 |
digestive system | 3.96e-15 | 116 |
digestive tract | 3.96e-15 | 116 |
primitive gut | 3.96e-15 | 116 |
endoderm-derived structure | 1.05e-14 | 118 |
endoderm | 1.05e-14 | 118 |
presumptive endoderm | 1.05e-14 | 118 |
subdivision of digestive tract | 2.47e-13 | 114 |
organ component layer | 4.05e-12 | 24 |
simple columnar epithelium | 4.67e-09 | 11 |
epithelium of mucosa | 8.16e-09 | 9 |
gastrointestinal system epithelium | 8.16e-09 | 9 |
intestinal epithelium | 8.16e-09 | 9 |
small intestine | 1.42e-08 | 4 |
ileal mucosa | 9.54e-07 | 3 |
ileum | 9.54e-07 | 3 |
mucosa of small intestine | 9.54e-07 | 3 |
wall of small intestine | 9.54e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.