FFCP PHASE1:Mm9::chr9:7445837..7445855,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17392|HGNC=|MCL_coexpression_id=98|UniProt=Q922W6,P28862|association_with_transcript=15bp_to_ENSMUST00000034497,NM_010809,uc009oco.1_5end|description=CAGE_peak_1_at_Mmp3_5end|id=chr9:7445837..7445855,+|ontology_enrichment_celltype=CL:0000680!3.54e-07!6;CL:0000183!3.54e-07!6;CL:0000187!3.54e-07!6;CL:0000056!3.54e-07!6|ontology_enrichment_celltype_v019_2=CL:0000680,1.14e-11,6;CL:0000187,1.14e-11,6;CL:0000056,1.14e-11,6;CL:0000222,7.77e-10,7;CL:0000355,2.14e-07,9;CL:0000192,8.85e-07,3;CL:0000359,8.85e-07,3;CL:0002539,8.85e-07,3;CL:0000514,8.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!5.44e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.31e-08,10;UBERON:0000947,2.89e-08,4;UBERON:0001637,2.89e-08,4;UBERON:0004573,2.89e-08,4;UBERON:0003509,2.89e-08,4;UBERON:0004571,2.89e-08,4;UBERON:0010191,2.89e-08,4;UBERON:0004572,2.89e-08,4;UBERON:0004872,6.99e-08,33;UBERON:0001134,2.14e-07,9;UBERON:0002036,2.14e-07,9;UBERON:0002385,2.14e-07,9;UBERON:0000486,2.14e-07,9;UBERON:0007503,2.14e-07,9;UBERON:0001015,2.14e-07,9;UBERON:0002329,2.14e-07,9;UBERON:0003082,2.14e-07,9;UBERON:0003059,2.14e-07,9;UBERON:0007282,2.14e-07,9;UBERON:0004290,2.14e-07,9;UBERON:0009618,2.14e-07,9;UBERON:0004535,3.50e-07,23;UBERON:0001009,3.50e-07,23;UBERON:0007023,5.08e-07,51;UBERON:0003100,7.39e-07,11;UBERON:0001135,8.85e-07,3;UBERON:0004237,8.85e-07,3;UBERON:0004695,8.85e-07,3;UBERON:0002111,8.85e-07,3;UBERON:0004178,8.85e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,293.591379519046,271.58879873708,228.515706441294,0,0,0.439372365468944,0,5.17949760013841,0,0,0,0,92.6133969729409,22.6361417551618,60.3336347964607,0,0,0,3.72728985276045,3.55717918444456,0.449949858640699,0,2.8419204597844,8.68840320503374,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4284414732812,13.9807386197553,0,0.860423876981386,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,1.48439043634778,70.1721664683835,0.148442139064825,0,0,0,0,0,0,0,21.8345028949067,0,0.485300549842228,0.883366073841574,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.36847667671102,0,54.9253243863697,0,0,0,0.30140963567143,0.816437989815934,0.12811372028485,0.0937017245597288,16.039608985819,0,0,0,0,0,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,1.86458261955468,5.11699955988663,6.14740322814942,9.26024289446565,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,2.37751854862164,2.38969527905241,0,0,0,0,0,0.0701358198903186,0,0.442830443938806,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,1.4473305640901,25.4959402429914,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0.44292937929755,0.159454768657487,13.4367918066905,14.6782234586011,31.5334947707695,0,0,52.6187772130369,45.8054998865856,0,0,0,6.05930225290495,0.631016438832513,0.780877488593277,0,0.955875191810208,0.445597348164788,0.566153061577665,0,0,0,0,2.55492153374884,0.178065603667255,0.162886959353576,9.40329700943452,5.30980553359851,0,0,0,0,0,0,0,0,1.58018378967908,1.05418608574999,3.09406629744561,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,22.2596441470998,0.161464426695906,0.241251699712623,1.43246812803764,1.14898629821543,0.582961673259701,0,3.41741761595705,0.412773735926445,1.29636169158798,0.565105371014073,0.27338845544205,1.14389086603261,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.0826534557253359,1.30877970992015,0.777689839750757,12.4267862617385,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.948033361884535,0,0,0,0.179026695667481,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.288635524920988,0.350630706544707,2.0405734525369,0,0.0897138566094757,0.671538465456314,1.35232715822533,22.5218970541418,8.42497471629419,9.21784030039983,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,1.01078884705519,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0.927471342481686|short_description=p1@Mmp3}} | ||
|EntrezGene=17392 | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|UniProt=Q922W6,P28862 | |||
|association_with_transcript=15bp_to_ENSMUST00000034497,NM_010809,uc009oco.1_5end | |||
|description=CAGE_peak_1_at_Mmp3_5end | |||
|id=chr9:7445837..7445855,+ | |||
|ontology_enrichment_celltype=CL:0000680!3.54e-07!6;CL:0000183!3.54e-07!6;CL:0000187!3.54e-07!6;CL:0000056!3.54e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.14e-11,6;CL:0000187,1.14e-11,6;CL:0000056,1.14e-11,6;CL:0000222,7.77e-10,7;CL:0000355,2.14e-07,9;CL:0000192,8.85e-07,3;CL:0000359,8.85e-07,3;CL:0002539,8.85e-07,3;CL:0000514,8.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.44e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.31e-08,10;UBERON:0000947,2.89e-08,4;UBERON:0001637,2.89e-08,4;UBERON:0004573,2.89e-08,4;UBERON:0003509,2.89e-08,4;UBERON:0004571,2.89e-08,4;UBERON:0010191,2.89e-08,4;UBERON:0004572,2.89e-08,4;UBERON:0004872,6.99e-08,33;UBERON:0001134,2.14e-07,9;UBERON:0002036,2.14e-07,9;UBERON:0002385,2.14e-07,9;UBERON:0000486,2.14e-07,9;UBERON:0007503,2.14e-07,9;UBERON:0001015,2.14e-07,9;UBERON:0002329,2.14e-07,9;UBERON:0003082,2.14e-07,9;UBERON:0003059,2.14e-07,9;UBERON:0007282,2.14e-07,9;UBERON:0004290,2.14e-07,9;UBERON:0009618,2.14e-07,9;UBERON:0004535,3.50e-07,23;UBERON:0001009,3.50e-07,23;UBERON:0007023,5.08e-07,51;UBERON:0003100,7.39e-07,11;UBERON:0001135,8.85e-07,3;UBERON:0004237,8.85e-07,3;UBERON:0004695,8.85e-07,3;UBERON:0002111,8.85e-07,3;UBERON:0004178,8.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,293.591379519046,271.58879873708,228.515706441294,0,0,0.439372365468944,0,5.17949760013841,0,0,0,0,92.6133969729409,22.6361417551618,60.3336347964607,0,0,0,3.72728985276045,3.55717918444456,0.449949858640699,0,2.8419204597844,8.68840320503374,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4284414732812,13.9807386197553,0,0.860423876981386,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,1.48439043634778,70.1721664683835,0.148442139064825,0,0,0,0,0,0,0,21.8345028949067,0,0.485300549842228,0.883366073841574,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.36847667671102,0,54.9253243863697,0,0,0,0.30140963567143,0.816437989815934,0.12811372028485,0.0937017245597288,16.039608985819,0,0,0,0,0,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,1.86458261955468,5.11699955988663,6.14740322814942,9.26024289446565,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,2.37751854862164,2.38969527905241,0,0,0,0,0,0.0701358198903186,0,0.442830443938806,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,1.4473305640901,25.4959402429914,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0.44292937929755,0.159454768657487,13.4367918066905,14.6782234586011,31.5334947707695,0,0,52.6187772130369,45.8054998865856,0,0,0,6.05930225290495,0.631016438832513,0.780877488593277,0,0.955875191810208,0.445597348164788,0.566153061577665,0,0,0,0,2.55492153374884,0.178065603667255,0.162886959353576,9.40329700943452,5.30980553359851,0,0,0,0,0,0,0,0,1.58018378967908,1.05418608574999,3.09406629744561,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,22.2596441470998,0.161464426695906,0.241251699712623,1.43246812803764,1.14898629821543,0.582961673259701,0,3.41741761595705,0.412773735926445,1.29636169158798,0.565105371014073,0.27338845544205,1.14389086603261,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0.0826534557253359,1.30877970992015,0.777689839750757,12.4267862617385,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.948033361884535,0,0,0,0.179026695667481,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.288635524920988,0.350630706544707,2.0405734525369,0,0.0897138566094757,0.671538465456314,1.35232715822533,22.5218970541418,8.42497471629419,9.21784030039983,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,1.01078884705519,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0.927471342481686 | |||
|short_description=p1@Mmp3 | |||
}} |
Revision as of 18:44, 14 September 2013
Short description: | p1@Mmp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mmp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | 15bp_to_ENSMUST00000034497, NM_010809, uc009oco.1_5end |
EntrezGene: | Mmp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.14e-11 | 6 |
muscle cell | 1.14e-11 | 6 |
myoblast | 1.14e-11 | 6 |
mesodermal cell | 7.77e-10 | 7 |
multi-potent skeletal muscle stem cell | 2.14e-07 | 9 |
smooth muscle cell | 8.85e-07 | 3 |
vascular associated smooth muscle cell | 8.85e-07 | 3 |
aortic smooth muscle cell | 8.85e-07 | 3 |
smooth muscle myoblast | 8.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 1.31e-08 | 10 |
aorta | 2.89e-08 | 4 |
artery | 2.89e-08 | 4 |
systemic artery | 2.89e-08 | 4 |
arterial blood vessel | 2.89e-08 | 4 |
systemic arterial system | 2.89e-08 | 4 |
aortic system | 2.89e-08 | 4 |
arterial system | 2.89e-08 | 4 |
splanchnic layer of lateral plate mesoderm | 6.99e-08 | 33 |
skeletal muscle tissue | 2.14e-07 | 9 |
striated muscle tissue | 2.14e-07 | 9 |
muscle tissue | 2.14e-07 | 9 |
multilaminar epithelium | 2.14e-07 | 9 |
epithelial vesicle | 2.14e-07 | 9 |
musculature | 2.14e-07 | 9 |
somite | 2.14e-07 | 9 |
myotome | 2.14e-07 | 9 |
presomitic mesoderm | 2.14e-07 | 9 |
presumptive segmental plate | 2.14e-07 | 9 |
dermomyotome | 2.14e-07 | 9 |
trunk paraxial mesoderm | 2.14e-07 | 9 |
cardiovascular system | 3.50e-07 | 23 |
circulatory system | 3.50e-07 | 23 |
adult organism | 5.08e-07 | 51 |
female organism | 7.39e-07 | 11 |
smooth muscle tissue | 8.85e-07 | 3 |
blood vessel smooth muscle | 8.85e-07 | 3 |
arterial system smooth muscle | 8.85e-07 | 3 |
artery smooth muscle tissue | 8.85e-07 | 3 |
aorta smooth muscle tissue | 8.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.