FFCP PHASE1:Mm9::chr9:71743854..71743909,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21406|HGNC=|UniProt=E9Q229,Q3UZA4,Q3UXQ3,Q8BP24|association_with_transcript=0bp_to_ENSMUST00000064957,NM_001253863,NM_001253864,uc009qpe.2,uc009qph.1,uc009qpj.1_5end|description=CAGE_peak_1_at_Tcf12_5end|id=chr9:71743854..71743909,-|ontology_enrichment_celltype=CL:0000107!3.13e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.90e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!3.13e-07!9;UBERON:0000468!5.93e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.90e-07,9;UBERON:0000479,8.30e-07,349|phase1_expression=35.8733417514738,0,0.454999239389536,0.30246421130683,0,1.17515490338323,1.63528848416868,0,0.140788722151667,0,0,0,0.171200729931206,0,0.999329285446988,2.22722794128809,0,5.0473946457318,4.11343300817216,3.39511721438424,3.23164502574065,0.397163804803541,0.261199789138935,1.43993180514066,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,2.28028103347649,1.51218077855958,1.99557459589774,6.98533740805594,11.0711661765223,15.8481681015439,0.866554859253824,0.997407872150954,1.22501613757421,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,13.4709595233868,13.2803779897564,7.15832333430558,1.56478268869608,4.14247797122848,0.878744730937887,0.777719596297134,16.2384249085421,24.4379359420452,2.68452169692378,0,0,29.327575708098,21.203474555468,6.18806510732931,19.2200637816618,26.9785399428737,16.4796164911607,13.5537812827653,9.78224275722253,0.899899717281399,0.988866362566974,0.7104801149461,5.99200221036809,12.2949857702897,7.56934169851887,4.3201900266141,6.30974884054146,7.42692559449889,11.4851641294839,17.1487118900936,11.8848384062613,8.27296907949019,4.40463523997555,2.55374676170375,4.91540906419979,9.75958529203434,10.0636407962651,11.4600941522487,1.95428099300967,3.93933827022176,6.57032465440283,25.3380583507354,35.5929201997757,21.063137378259,2.95332153999418,28.8683359607921,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,2.95771181531029,0,0,0,0,0,0,1.25602267690966,7.76813650941515,8.46120192669501,10.235634279202,6.08930956624282,6.6878494204257,5.57673770044703,8.34879820663504,4.02133092254962,0.741584903203122,3.18118585223806,7.07688441559899,20.2208562434261,14.3546986999256,16.0008833534623,14.9113408974498,11.7112318804619,10.2628886338593,3.32094171771169,2.15667224110656,1.19980546198682,5.46401976414178,6.29120685500255,6.8625090422794,11.5602003943835,2.9550134432687,3.06858548796397,4.98691306942944,4.70499662896497,22.2009813193689,13.9335807083304,0,5.26104639716185,52.8288998428577,28.9676651586176,33.6716182736003,21.8521985861787,14.3557013209302,13.5800543501941,6.93392761741993,9.05461797586555,122.87375597172,111.383481218846,85.6881974678431,62.2515880094313,68.9557178079483,47.3622946470147,42.8026843728522,66.2784108505582,7.72434506044558,4.11756651383544,6.53576048609863,23.6123380690472,37.7586956569565,18.9065164534066,20.3600472603281,10.6252685143598,10.7986979021165,11.39416329277,7.24338183778972,8.87416601990488,6.08871444679878,5.25335885053105,3.4859588104718,3.21639972335731,3.51280184465681,4.02619256281115,4.20579897128254,18.1112117787541,0.330418782983798,0.793351699990633,24.7414370620871,18.1144604051142,10.9537342123779,4.03367049246685,4.89231696458715,5.51654315726422,1.42358718463353,4.94096864172033,3.2673577144035,4.17808591286417,2.33956904542944,1.79763881730844,3.24207074812041,2.78797782556114,35.4678974782263,30.5043528667976,33.8123207019241,18.9395734896142,16.2920089220806,13.6063490587218,4.42655759869801,0.738050739898011,0.31399745568275,0.123397163921801,0.296452627087149,4.33797274861845,2.94838492669805,0.449724224769707,2.43432145666204,1.92941727801933,3.8193877767213,4.60313819921297,3.24270453550071,1.37280706594041,1.43768206527355,1.48856379067401,2.80833905803104,0,0.358794827043824,0,18.6600722068271,64.6165714137353,66.9786053176726,39.2111148140685,26.9893785531777,17.0856382590652,9.99783291721258,11.3177515757523,26.9556096421587,23.6967217924189,15.3076577911188,18.0249646187312,10.3610989119537,10.2700831592873,12.0633027151418,13.5976420954677,0.491764273019036,4.13905119457099,13.4862495589745,6.79827782234778,0.491804836130026,12.1186045058099,83.2941699258918,115.179429567508,101.033573536683,87.7015488485866,76.6427438843436,55.4830000346112,80.557329633304,74.2329879094732,85.3821600364491,12.2102100240287,7.2389443456217,45.9409257461518,57.3362096924588,15.5071915594183,1.32745138339963,8.74010290157933,4.53485335447127,3.39489143560617,4.13422650033082,4.30409207121498,4.13485269069154,2.18120237686503,4.27796854061666,1.58018378967908,1.05418608574999,0,21.1072555567349,52.7579005511739,14.6175312674513,19.7190072229065,32.8079432238206,19.9773075714319,18.9231373692439,12.178597964584,3.75474732901937,0.42366414172764,0,5.93590510589328,32.9387430459647,17.00824482974,11.1016279922917,5.25250879184196,3.49777003955821,15.3903000668723,2.56306321196779,15.0662413613152,13.3340059706192,3.01389531207506,2.59719032669948,1.83022538565218,0.679913719975421,1.81936888020755,3.04039942369732,26.7307773044232,67.695902626363,22.7717803182071,17.4968652131318,30.317802922098,30.789121488211,23.1966675781892,29.2593233267689,26.437350140387,3.24037433229482,3.72803587852155,0,13.3069725979141,6.783798108741,4.4723773319131,4.52059382172059,6.42033276864957,7.04143431874524,1.95306577265925,1.15345278868282,0.241584120826006,2.01621004380506,4.10814456816632,16.6234676537935,22.4936996190972,24.2951938968477,17.0075360884107,13.9076948346885,6.37035882455835,6.79371825003055,4.03865799792591,5.18206285253999,1.91569751759997,2.63136277997332,4.32953287381483,2.10378423926824,12.6969014824518,0,0,0,9.85266929564171,2.43987218086537,2.93042598827624,2.14368379079066,0,4.51801474093653,4.60325236507177,6.30185064783336,3.26521046453006,2.74033007908257,1.5107877947794,4.72515750162264,2.2516060161211,0.453142408984205,2.5888015587591,134.92355185943,125.293810247924,71.195913599474,41.8143553357466,41.9226325255965,17.8328203196514,28.0030877030035,24.1061016969506,24.389859928978,28.8074821410729,31.68491248628,25.6531824285064,26.5005466139767,25.8661615715672,21.2511235135769,20.0043350338891,17.2667645657835,17.7476482826609,20.6042950401653,23.9934239819068,33.2583174813853,21.4745725452798,22.1745656651008,24.9995836607605,23.056798201756,23.1844025623194,24.3294203920788,23.1501346065302,22.2718746707213,21.3234063229941,17.0834426098811,17.6323023452259,19.2338590289754,21.0714104012914,33.9515635326809,37.2217761127539,29.7093142725669,33.7347554855828,35.5796297648049,25.1474217796248,20.8681052058379|short_description=p1@Tcf12}} | ||
|EntrezGene=21406 | |||
|HGNC= | |||
|UniProt=E9Q229,Q3UZA4,Q3UXQ3,Q8BP24 | |||
|association_with_transcript=0bp_to_ENSMUST00000064957,NM_001253863,NM_001253864,uc009qpe.2,uc009qph.1,uc009qpj.1_5end | |||
|description=CAGE_peak_1_at_Tcf12_5end | |||
|id=chr9:71743854..71743909,- | |||
|ontology_enrichment_celltype=CL:0000107!3.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.90e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.13e-07!9;UBERON:0000468!5.93e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.90e-07,9;UBERON:0000479,8.30e-07,349 | |||
|phase1_expression=35.8733417514738,0,0.454999239389536,0.30246421130683,0,1.17515490338323,1.63528848416868,0,0.140788722151667,0,0,0,0.171200729931206,0,0.999329285446988,2.22722794128809,0,5.0473946457318,4.11343300817216,3.39511721438424,3.23164502574065,0.397163804803541,0.261199789138935,1.43993180514066,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,2.28028103347649,1.51218077855958,1.99557459589774,6.98533740805594,11.0711661765223,15.8481681015439,0.866554859253824,0.997407872150954,1.22501613757421,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,13.4709595233868,13.2803779897564,7.15832333430558,1.56478268869608,4.14247797122848,0.878744730937887,0.777719596297134,16.2384249085421,24.4379359420452,2.68452169692378,0,0,29.327575708098,21.203474555468,6.18806510732931,19.2200637816618,26.9785399428737,16.4796164911607,13.5537812827653,9.78224275722253,0.899899717281399,0.988866362566974,0.7104801149461,5.99200221036809,12.2949857702897,7.56934169851887,4.3201900266141,6.30974884054146,7.42692559449889,11.4851641294839,17.1487118900936,11.8848384062613,8.27296907949019,4.40463523997555,2.55374676170375,4.91540906419979,9.75958529203434,10.0636407962651,11.4600941522487,1.95428099300967,3.93933827022176,6.57032465440283,25.3380583507354,35.5929201997757,21.063137378259,2.95332153999418,28.8683359607921,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,2.95771181531029,0,0,0,0,0,0,1.25602267690966,7.76813650941515,8.46120192669501,10.235634279202,6.08930956624282,6.6878494204257,5.57673770044703,8.34879820663504,4.02133092254962,0.741584903203122,3.18118585223806,7.07688441559899,20.2208562434261,14.3546986999256,16.0008833534623,14.9113408974498,11.7112318804619,10.2628886338593,3.32094171771169,2.15667224110656,1.19980546198682,5.46401976414178,6.29120685500255,6.8625090422794,11.5602003943835,2.9550134432687,3.06858548796397,4.98691306942944,4.70499662896497,22.2009813193689,13.9335807083304,0,5.26104639716185,52.8288998428577,28.9676651586176,33.6716182736003,21.8521985861787,14.3557013209302,13.5800543501941,6.93392761741993,9.05461797586555,122.87375597172,111.383481218846,85.6881974678431,62.2515880094313,68.9557178079483,47.3622946470147,42.8026843728522,66.2784108505582,7.72434506044558,4.11756651383544,6.53576048609863,23.6123380690472,37.7586956569565,18.9065164534066,20.3600472603281,10.6252685143598,10.7986979021165,11.39416329277,7.24338183778972,8.87416601990488,6.08871444679878,5.25335885053105,3.4859588104718,3.21639972335731,3.51280184465681,4.02619256281115,4.20579897128254,18.1112117787541,0.330418782983798,0.793351699990633,24.7414370620871,18.1144604051142,10.9537342123779,4.03367049246685,4.89231696458715,5.51654315726422,1.42358718463353,4.94096864172033,3.2673577144035,4.17808591286417,2.33956904542944,1.79763881730844,3.24207074812041,2.78797782556114,35.4678974782263,30.5043528667976,33.8123207019241,18.9395734896142,16.2920089220806,13.6063490587218,4.42655759869801,0.738050739898011,0.31399745568275,0.123397163921801,0.296452627087149,4.33797274861845,2.94838492669805,0.449724224769707,2.43432145666204,1.92941727801933,3.8193877767213,4.60313819921297,3.24270453550071,1.37280706594041,1.43768206527355,1.48856379067401,2.80833905803104,0,0.358794827043824,0,18.6600722068271,64.6165714137353,66.9786053176726,39.2111148140685,26.9893785531777,17.0856382590652,9.99783291721258,11.3177515757523,26.9556096421587,23.6967217924189,15.3076577911188,18.0249646187312,10.3610989119537,10.2700831592873,12.0633027151418,13.5976420954677,0.491764273019036,4.13905119457099,13.4862495589745,6.79827782234778,0.491804836130026,12.1186045058099,83.2941699258918,115.179429567508,101.033573536683,87.7015488485866,76.6427438843436,55.4830000346112,80.557329633304,74.2329879094732,85.3821600364491,12.2102100240287,7.2389443456217,45.9409257461518,57.3362096924588,15.5071915594183,1.32745138339963,8.74010290157933,4.53485335447127,3.39489143560617,4.13422650033082,4.30409207121498,4.13485269069154,2.18120237686503,4.27796854061666,1.58018378967908,1.05418608574999,0,21.1072555567349,52.7579005511739,14.6175312674513,19.7190072229065,32.8079432238206,19.9773075714319,18.9231373692439,12.178597964584,3.75474732901937,0.42366414172764,0,5.93590510589328,32.9387430459647,17.00824482974,11.1016279922917,5.25250879184196,3.49777003955821,15.3903000668723,2.56306321196779,15.0662413613152,13.3340059706192,3.01389531207506,2.59719032669948,1.83022538565218,0.679913719975421,1.81936888020755,3.04039942369732,26.7307773044232,67.695902626363,22.7717803182071,17.4968652131318,30.317802922098,30.789121488211,23.1966675781892,29.2593233267689,26.437350140387,3.24037433229482,3.72803587852155,0,13.3069725979141,6.783798108741,4.4723773319131,4.52059382172059,6.42033276864957,7.04143431874524,1.95306577265925,1.15345278868282,0.241584120826006,2.01621004380506,4.10814456816632,16.6234676537935,22.4936996190972,24.2951938968477,17.0075360884107,13.9076948346885,6.37035882455835,6.79371825003055,4.03865799792591,5.18206285253999,1.91569751759997,2.63136277997332,4.32953287381483,2.10378423926824,12.6969014824518,0,0,0,9.85266929564171,2.43987218086537,2.93042598827624,2.14368379079066,0,4.51801474093653,4.60325236507177,6.30185064783336,3.26521046453006,2.74033007908257,1.5107877947794,4.72515750162264,2.2516060161211,0.453142408984205,2.5888015587591,134.92355185943,125.293810247924,71.195913599474,41.8143553357466,41.9226325255965,17.8328203196514,28.0030877030035,24.1061016969506,24.389859928978,28.8074821410729,31.68491248628,25.6531824285064,26.5005466139767,25.8661615715672,21.2511235135769,20.0043350338891,17.2667645657835,17.7476482826609,20.6042950401653,23.9934239819068,33.2583174813853,21.4745725452798,22.1745656651008,24.9995836607605,23.056798201756,23.1844025623194,24.3294203920788,23.1501346065302,22.2718746707213,21.3234063229941,17.0834426098811,17.6323023452259,19.2338590289754,21.0714104012914,33.9515635326809,37.2217761127539,29.7093142725669,33.7347554855828,35.5796297648049,25.1474217796248,20.8681052058379 | |||
|short_description=p1@Tcf12 | |||
}} | |||
Revision as of 18:40, 14 September 2013
| Short description: | p1@Tcf12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tcf12_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000064957, NM_001253863, NM_001253864, uc009qpe.2, uc009qph.1, uc009qpj.1_5end |
| EntrezGene: | Tcf12 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 2.90e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| autonomic nervous system | 2.90e-07 | 9 |
| tissue | 8.30e-07 | 349 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
