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FFCP PHASE1:Mm9::chr9:68501568..68501592,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19883|HGNC=|MCL_coexpression_id=2828|UniProt=P51448|association_with_transcript=0bp_to_ENSMUST00000034766,ENSMUST00000140351_5end|description=CAGE_peak_3_at_Rora_5end|id=chr9:68501568..68501592,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!9.71e-11!122;UBERON:0000025!1.30e-10!114;UBERON:0002346!4.31e-09!71;UBERON:0003075!4.31e-09!71;UBERON:0007284!4.31e-09!71;UBERON:0004121!4.58e-09!102;UBERON:0000924!4.58e-09!102;UBERON:0006601!4.58e-09!102;UBERON:0000033!1.62e-08!63;UBERON:0000468!2.56e-08!333;UBERON:0000955!1.02e-07!50;UBERON:0006238!1.02e-07!50;UBERON:0001017!1.06e-07!73;UBERON:0005743!1.06e-07!73;UBERON:0002616!2.79e-07!49;UBERON:0000073!5.31e-07!75;UBERON:0001016!5.31e-07!75;UBERON:0002021!9.76e-07!10;UBERON:0000411!9.76e-07!10;UBERON:0001950!9.76e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.86e-09,114;UBERON:0004111,1.15e-08,122;UBERON:0010314,6.60e-08,92;UBERON:0002021,3.03e-07,10;UBERON:0000411,3.03e-07,10;UBERON:0001950,3.03e-07,10;UBERON:0001017,4.13e-07,73;UBERON:0010371,7.60e-07,73|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,2.12608225377674,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,1.83546752161682,0,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0.771778308107841,2.29226751951005,0.515672092277442,0.809265843438391,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,3.30347642998166,6.00130489000382,5.83704826373725,0.923204014111357,0.548925861614458,1.04182674111352,2.23346399201105,2.25105044012672,3.97275444219706,1.76777151284201,1.56608848879013,0.745597783301202,0.151452386666368,0.151143120213571,8.98579914975201,5.16254326188832,0.679971333707751,1.07940638327563,0,0.896053774194671,1.26399978118577,0.681721290312231,1.29893002301434,1.41335829804136,1.12674735821344,3.84979432242953,10.1922095882658,0,0.432982082022428,0,0,1.02765491747154,1.29468941823586,5.93768556259299,0.693941307064543,1.82679286987285,2.30615497256059,1.50722640552623,4.8211369925639,2.76466500925286,0,2.31358971071859,0,0.970601099684455,2.20841518460394,0.969750506270444,0,13.7606974595427,15.2896095973822,0.255457055208591,0,0,0,7.33974133083631,7.32000964509802,1.7591609295801,2.9550134432687,6.39288643325826,3.74018480207208,6.48965052271031,1.32391173005411,2.11491850037158,1.51633655060205,3.99839526184301,1.04096354370163,0.919608417733892,0.900310649026746,2.10986744970001,2.24520447199382,1.7935920839879,2.52994656311268,5.69147415625834,0.431135985865684,1.32374256117473,2.46331573829528,0.43839146485515,1.66828349535359,2.089512999133,2.05782136407943,2.7864797354589,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,1.42046841351126,0.590292695242212,1.23413690309903,1.39520366850245,1.3413670069981,1.5179494507732,2.46839774870221,2.79084688934462,2.99954595319666,3.21639972335731,3.07370161407471,4.69722465661301,4.6263788684108,0.720332286654991,0.330418782983798,0.528901133327089,0.853153002140936,2.32236671860439,0.38660238396628,0.80673409849337,1.77902435075896,0.380451252225118,0.949058123089023,0.988193728344065,1.25667604400135,0.397912944082302,1.55971269695296,0,1.08069024937347,0.597423819763102,0.379335801906163,1.25673363870702,0,1.83286195060783,2.52138233317913,1.82353131714828,2.33975187359752,2.50937251565324,1.56998727841375,2.46794327843601,1.1858105083486,0.166845105716094,0.589676985339609,0.449724224769707,0.608580364165509,0.72353147925725,1.2731292589071,1.15078454980324,0.810676133875177,1.64736847912849,5.75072826109418,2.60498663367952,3.12037673114561,1.76805214562978,2.15276896226295,2.41221760681684,1.47802552133284,1.32643988239339,1.46668478797823,1.18821560042632,2.58159273117352,2.68010011906905,3.57065461329021,1.95133647857799,3.31033802623001,3.5434350343804,4.14582398509466,2.45794972073607,1.20879487306127,1.44649058581512,0,0,1.96705709207614,2.75936746304733,4.0137647496948,3.16471553798949,0.163934945376675,3.02965112645248,3.15508219416257,1.17131623288992,2.36965737506079,1.67278158566786,3.34198011123591,3.11384183867716,2.42886421004937,1.46127928955656,1.58115111178609,4.81981974632711,3.12268187458191,1.42452482933804,2.44330439030364,4.28922319728592,0,0.728341908464944,1.81394134178851,0.377210159511796,0.295301892880773,1.84461088766356,2.06742634534577,2.18120237686503,2.13898427030833,2.21225730555071,1.05418608574999,2.06271086496374,9.87274856685985,2.34079422240703,0.905510786479282,1.28602221018955,2.6601035046341,1.60531935841864,3.45552943264454,0.913394847343798,0.23467170806371,1.48282449604674,1.10264199027481,2.63818004706368,1.45317984026315,0.904693873922338,0.477489376012546,1.14898629821543,1.45740418314925,3.8939313422207,0.512612642393558,0.619160603889667,0.555583582109135,0.565105371014073,0.27338845544205,0.228778173206523,0.509935289981566,0.139951452323658,0.414599921413271,0.954670618015114,0.949007980743406,1.82987520414164,1.83609079397062,0.836353184057875,0.655087691238533,2.15782954215713,3.2234847732881,1.30877970992015,1.42576470620972,0.621339313086926,0,1.19613236835183,0.330916980914195,1.75006069509643,0.774958940866387,1.85851738039856,3.52071715937262,1.43224823328345,1.67774951081137,0.483168241652012,0,0,0,0.205421914329655,0.77952493786677,0.716106782669926,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0.0962118416403295,0.233753804363138,0.906921534460845,0,0.0897138566094757,0,4.82973985080476,0.563047426353546,1.83151624267265,1.2862102744744,1.00314420807073,3.95326289831947,3.68260189205742,2.86447756719698,3.95262319390481,4.7955776383945,6.7985450765073,6.07520250208625,2.70192721934532,7.70342095273148,6.21312374102184,0.31136204275253,0.798049746802062,2.39027048055788,1.94485373654635,0,0.551530525350042,2.889207461421,1.03017528619447,1.92551525755089,1.01078884705519,0.760437899670719,2.64076877940507,1.40462261204824,1.60062881012173,1.78049953762401,4.76293691283074,2.31768651889711,1.92909220463705,1.23625770240992,1.61918812147837,2.05721551431249,1.59728225543404,1.66905332963125,2.47088908274958,1.78807822789128,1.35383372626682,2.56099162021882,1.05227884575137,1.62964936615034,0,2.01679530811096,1.97008964751127,0,1.39443157067369,1.73615949883027,0.749431733813838,1.40358965067245,2.57845264857958,2.10417165275728,2.64709702943419,3.01428186306548|short_description=p3@Rora}}
|EntrezGene=19883
|HGNC=
|MCL_coexpression_id=2828
|UniProt=P51448
|association_with_transcript=0bp_to_ENSMUST00000034766,ENSMUST00000140351_5end
|description=CAGE_peak_3_at_Rora_5end
|id=chr9:68501568..68501592,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!9.71e-11!122;UBERON:0000025!1.30e-10!114;UBERON:0002346!4.31e-09!71;UBERON:0003075!4.31e-09!71;UBERON:0007284!4.31e-09!71;UBERON:0004121!4.58e-09!102;UBERON:0000924!4.58e-09!102;UBERON:0006601!4.58e-09!102;UBERON:0000033!1.62e-08!63;UBERON:0000468!2.56e-08!333;UBERON:0000955!1.02e-07!50;UBERON:0006238!1.02e-07!50;UBERON:0001017!1.06e-07!73;UBERON:0005743!1.06e-07!73;UBERON:0002616!2.79e-07!49;UBERON:0000073!5.31e-07!75;UBERON:0001016!5.31e-07!75;UBERON:0002021!9.76e-07!10;UBERON:0000411!9.76e-07!10;UBERON:0001950!9.76e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.86e-09,114;UBERON:0004111,1.15e-08,122;UBERON:0010314,6.60e-08,92;UBERON:0002021,3.03e-07,10;UBERON:0000411,3.03e-07,10;UBERON:0001950,3.03e-07,10;UBERON:0001017,4.13e-07,73;UBERON:0010371,7.60e-07,73
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,2.12608225377674,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,1.83546752161682,0,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0.771778308107841,2.29226751951005,0.515672092277442,0.809265843438391,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,3.30347642998166,6.00130489000382,5.83704826373725,0.923204014111357,0.548925861614458,1.04182674111352,2.23346399201105,2.25105044012672,3.97275444219706,1.76777151284201,1.56608848879013,0.745597783301202,0.151452386666368,0.151143120213571,8.98579914975201,5.16254326188832,0.679971333707751,1.07940638327563,0,0.896053774194671,1.26399978118577,0.681721290312231,1.29893002301434,1.41335829804136,1.12674735821344,3.84979432242953,10.1922095882658,0,0.432982082022428,0,0,1.02765491747154,1.29468941823586,5.93768556259299,0.693941307064543,1.82679286987285,2.30615497256059,1.50722640552623,4.8211369925639,2.76466500925286,0,2.31358971071859,0,0.970601099684455,2.20841518460394,0.969750506270444,0,13.7606974595427,15.2896095973822,0.255457055208591,0,0,0,7.33974133083631,7.32000964509802,1.7591609295801,2.9550134432687,6.39288643325826,3.74018480207208,6.48965052271031,1.32391173005411,2.11491850037158,1.51633655060205,3.99839526184301,1.04096354370163,0.919608417733892,0.900310649026746,2.10986744970001,2.24520447199382,1.7935920839879,2.52994656311268,5.69147415625834,0.431135985865684,1.32374256117473,2.46331573829528,0.43839146485515,1.66828349535359,2.089512999133,2.05782136407943,2.7864797354589,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,1.42046841351126,0.590292695242212,1.23413690309903,1.39520366850245,1.3413670069981,1.5179494507732,2.46839774870221,2.79084688934462,2.99954595319666,3.21639972335731,3.07370161407471,4.69722465661301,4.6263788684108,0.720332286654991,0.330418782983798,0.528901133327089,0.853153002140936,2.32236671860439,0.38660238396628,0.80673409849337,1.77902435075896,0.380451252225118,0.949058123089023,0.988193728344065,1.25667604400135,0.397912944082302,1.55971269695296,0,1.08069024937347,0.597423819763102,0.379335801906163,1.25673363870702,0,1.83286195060783,2.52138233317913,1.82353131714828,2.33975187359752,2.50937251565324,1.56998727841375,2.46794327843601,1.1858105083486,0.166845105716094,0.589676985339609,0.449724224769707,0.608580364165509,0.72353147925725,1.2731292589071,1.15078454980324,0.810676133875177,1.64736847912849,5.75072826109418,2.60498663367952,3.12037673114561,1.76805214562978,2.15276896226295,2.41221760681684,1.47802552133284,1.32643988239339,1.46668478797823,1.18821560042632,2.58159273117352,2.68010011906905,3.57065461329021,1.95133647857799,3.31033802623001,3.5434350343804,4.14582398509466,2.45794972073607,1.20879487306127,1.44649058581512,0,0,1.96705709207614,2.75936746304733,4.0137647496948,3.16471553798949,0.163934945376675,3.02965112645248,3.15508219416257,1.17131623288992,2.36965737506079,1.67278158566786,3.34198011123591,3.11384183867716,2.42886421004937,1.46127928955656,1.58115111178609,4.81981974632711,3.12268187458191,1.42452482933804,2.44330439030364,4.28922319728592,0,0.728341908464944,1.81394134178851,0.377210159511796,0.295301892880773,1.84461088766356,2.06742634534577,2.18120237686503,2.13898427030833,2.21225730555071,1.05418608574999,2.06271086496374,9.87274856685985,2.34079422240703,0.905510786479282,1.28602221018955,2.6601035046341,1.60531935841864,3.45552943264454,0.913394847343798,0.23467170806371,1.48282449604674,1.10264199027481,2.63818004706368,1.45317984026315,0.904693873922338,0.477489376012546,1.14898629821543,1.45740418314925,3.8939313422207,0.512612642393558,0.619160603889667,0.555583582109135,0.565105371014073,0.27338845544205,0.228778173206523,0.509935289981566,0.139951452323658,0.414599921413271,0.954670618015114,0.949007980743406,1.82987520414164,1.83609079397062,0.836353184057875,0.655087691238533,2.15782954215713,3.2234847732881,1.30877970992015,1.42576470620972,0.621339313086926,0,1.19613236835183,0.330916980914195,1.75006069509643,0.774958940866387,1.85851738039856,3.52071715937262,1.43224823328345,1.67774951081137,0.483168241652012,0,0,0,0.205421914329655,0.77952493786677,0.716106782669926,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.403304740547362,0.487289403698762,0.0962118416403295,0.233753804363138,0.906921534460845,0,0.0897138566094757,0,4.82973985080476,0.563047426353546,1.83151624267265,1.2862102744744,1.00314420807073,3.95326289831947,3.68260189205742,2.86447756719698,3.95262319390481,4.7955776383945,6.7985450765073,6.07520250208625,2.70192721934532,7.70342095273148,6.21312374102184,0.31136204275253,0.798049746802062,2.39027048055788,1.94485373654635,0,0.551530525350042,2.889207461421,1.030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|short_description=p3@Rora
}}

Revision as of 18:36, 14 September 2013

Short description:p3@Rora
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rora_5end
Coexpression cluster:MCL_coexpression_mm9:2828
Association with transcript: 0bp_to_ENSMUST00000034766, ENSMUST00000140351_5end
EntrezGene:Rora
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rora

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I215.29
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube7.86e-09114
anatomical conduit1.15e-08122
structure with developmental contribution from neural crest6.60e-0892
occipital lobe3.03e-0710
visual cortex3.03e-0710
neocortex3.03e-0710
central nervous system4.13e-0773
ecto-epithelium7.60e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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