FFCP PHASE1:Mm9::chr9:66763300..66763315,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:66763300..66763315,-|id=chr9:66763300..66763315,-|ontology_enrichment_celltype=CL:0000988!5.94e-10!32;CL:0002032!5.94e-10!32;CL:0000037!5.94e-10!32;CL:0000566!5.94e-10!32;CL:0000837!5.94e-10!32;CL:0000084!8.21e-07!11;CL:0000827!8.21e-07!11|ontology_enrichment_celltype_v019_2=CL:0000355,9.28e-09,9|ontology_enrichment_disease=DOID:0060100!2.44e-11!3;DOID:4045!2.44e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.39e-25,3;DOID:4045,5.39e-25,3;DOID:0050686,7.62e-13,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.28e-09,9;UBERON:0002036,9.28e-09,9;UBERON:0002385,9.28e-09,9;UBERON:0000486,9.28e-09,9;UBERON:0007503,9.28e-09,9;UBERON:0001015,9.28e-09,9;UBERON:0002329,9.28e-09,9;UBERON:0003082,9.28e-09,9;UBERON:0003059,9.28e-09,9;UBERON:0007282,9.28e-09,9;UBERON:0004290,9.28e-09,9;UBERON:0009618,9.28e-09,9;UBERON:0000383,6.16e-08,10;UBERON:0007524,2.91e-07,11;UBERON:0003077,2.91e-07,11;UBERON:0007285,2.91e-07,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4856703372656,15.626706890476,7.32933241563318,76.4700934440319,23.2235464885872,15.0508209439658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,2.09927178485487,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:66763300..66763315,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:66763300..66763315,- | |||
|id=chr9:66763300..66763315,- | |||
|ontology_enrichment_celltype=CL:0000988!5.94e-10!32;CL:0002032!5.94e-10!32;CL:0000037!5.94e-10!32;CL:0000566!5.94e-10!32;CL:0000837!5.94e-10!32;CL:0000084!8.21e-07!11;CL:0000827!8.21e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,9.28e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.44e-11!3;DOID:4045!2.44e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.39e-25,3;DOID:4045,5.39e-25,3;DOID:0050686,7.62e-13,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.28e-09,9;UBERON:0002036,9.28e-09,9;UBERON:0002385,9.28e-09,9;UBERON:0000486,9.28e-09,9;UBERON:0007503,9.28e-09,9;UBERON:0001015,9.28e-09,9;UBERON:0002329,9.28e-09,9;UBERON:0003082,9.28e-09,9;UBERON:0003059,9.28e-09,9;UBERON:0007282,9.28e-09,9;UBERON:0004290,9.28e-09,9;UBERON:0009618,9.28e-09,9;UBERON:0000383,6.16e-08,10;UBERON:0007524,2.91e-07,11;UBERON:0003077,2.91e-07,11;UBERON:0007285,2.91e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4856703372656,15.626706890476,7.32933241563318,76.4700934440319,23.2235464885872,15.0508209439658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,2.09927178485487,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:66763300..66763315,- | |||
}} |
Revision as of 18:34, 14 September 2013
Short description: | p@chr9:66763300..66763315, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:66763300..66763315, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 9.28e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.28e-09 | 9 |
striated muscle tissue | 9.28e-09 | 9 |
muscle tissue | 9.28e-09 | 9 |
multilaminar epithelium | 9.28e-09 | 9 |
epithelial vesicle | 9.28e-09 | 9 |
musculature | 9.28e-09 | 9 |
somite | 9.28e-09 | 9 |
myotome | 9.28e-09 | 9 |
presomitic mesoderm | 9.28e-09 | 9 |
presumptive segmental plate | 9.28e-09 | 9 |
dermomyotome | 9.28e-09 | 9 |
trunk paraxial mesoderm | 9.28e-09 | 9 |
musculature of body | 6.16e-08 | 10 |
dense mesenchyme tissue | 2.91e-07 | 11 |
paraxial mesoderm | 2.91e-07 | 11 |
presumptive paraxial mesoderm | 2.91e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.39e-25 | 3 |
muscle cancer | 5.39e-25 | 3 |
organ system cancer | 7.62e-13 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.