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FFCP PHASE1:Mm9::chr9:66643138..66643218,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=208117|HGNC=|MCL_coexpression_id=3|UniProt=F8WHK7|association_with_transcript=0bp_to_ENSMUST00000113730_5end|description=CAGE_peak_1_at_Aph1b_5end|id=chr9:66643138..66643218,-|ontology_enrichment_celltype=CL:0000393!2.59e-09!39;CL:0000211!2.59e-09!39;CL:0000221!7.38e-09!44;CL:0000133!7.38e-09!44;CL:0000540!7.62e-09!33;CL:0000047!7.62e-09!33;CL:0000031!7.62e-09!33;CL:0000404!7.62e-09!33;CL:0000055!1.60e-08!50;CL:0002319!1.87e-08!43|ontology_enrichment_celltype_v019_2=CL:0000393,2.46e-09,39;CL:0000211,2.46e-09,39;CL:0000221,7.03e-09,44;CL:0000133,7.03e-09,44;CL:0000540,7.26e-09,33;CL:0000047,7.26e-09,33;CL:0000031,7.26e-09,33;CL:0000404,7.26e-09,33;CL:0002319,1.78e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.58e-17!75;UBERON:0001016!4.58e-17!75;UBERON:0001017!4.77e-17!73;UBERON:0005743!4.77e-17!73;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0000033!2.98e-12!63;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0000955!1.53e-10!50;UBERON:0006238!1.53e-10!50;UBERON:0002616!5.21e-10!49;UBERON:0004111!1.17e-09!122;UBERON:0001049!2.26e-09!52;UBERON:0005068!2.26e-09!52;UBERON:0006241!2.26e-09!52;UBERON:0007135!2.26e-09!52;UBERON:0000025!5.38e-09!114;UBERON:0003056!3.28e-08!49;UBERON:0003080!3.20e-07!40;UBERON:0002780!9.45e-07!39;UBERON:0001890!9.45e-07!39;UBERON:0006240!9.45e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.32e-17,95;UBERON:0000924,3.32e-17,95;UBERON:0006601,3.32e-17,95;UBERON:0001016,4.13e-17,75;UBERON:0001017,4.30e-17,73;UBERON:0010314,3.14e-13,92;UBERON:0002346,5.70e-12,64;UBERON:0003075,5.70e-12,64;UBERON:0007284,5.70e-12,64;UBERON:0010371,2.69e-11,73;UBERON:0000073,5.56e-10,54;UBERON:0004111,1.08e-09,122;UBERON:0000955,1.87e-09,47;UBERON:0006238,1.87e-09,47;UBERON:0001049,2.14e-09,52;UBERON:0005068,2.14e-09,52;UBERON:0006241,2.14e-09,52;UBERON:0007135,2.14e-09,52;UBERON:0000025,5.00e-09,114;UBERON:0002616,6.15e-09,46;UBERON:0003056,3.14e-08,49;UBERON:0003080,3.08e-07,40;UBERON:0002780,9.13e-07,39;UBERON:0001890,9.13e-07,39;UBERON:0006240,9.13e-07,39|phase1_expression=9.44878197918284,0.697950815278722,1.36499771816861,0.60492842261366,0.500895729946347,0.839396359559449,1.63528848416868,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0.809901069559304,0.699561878128147,0,0.822686601634433,1.69755860719212,5.78294373027274,0.992909512008853,0.783599367416806,1.27993938234725,0.22940928106717,1.14846392823004,0.430761996159075,1.50829862880122,2.66032787238923,2.01624103807945,1.99557459589774,1.90509202037889,4.92051830067656,0,1.44425809875637,0.997407872150954,0.612508068787107,51.8979222113766,25.0027310247616,34.0290433582969,32.3527318417058,28.0048648832963,29.1306211818692,6.29484089877886,4.76471576731718,6.9747765821439,3.9119567217402,4.79655344036982,3.29529274101708,6.61061656852564,7.69925318939494,8.62515386189829,0.167782606057736,0,0,7.20326420900652,5.15760191889762,5.15672092277442,6.67644320836673,6.87688273053643,6.33831403506179,5.76035704517525,6.22506357277798,3.1496490104849,2.96659908770092,2.1314403448383,1.49800055259202,6.14749288514487,5.80661828927475,4.59020190327748,3.99617426567626,3.71346279724945,4.41737081903227,7.59442955132715,6.3258010872036,3.67687514644008,9.91042928994498,8.04430229936683,9.21639199537461,7.78129097608144,6.77008562657831,4.68822033501084,8.37548997004143,12.380777420697,11.6126668310376,5.59794312399969,7.11858403995515,5.03278503728312,3.40767869999328,7.93501381121248,12.1743085254705,1.72084775396277,2.03991400112325,2.69851595818909,0,0.448026887097336,5.05599912474307,9.37366774179318,7.79358013808606,4.59341446863442,10.7040999030277,5.13305909657271,0,0,1.5154372870785,1.26679932737549,2.02209778005913,3.08296475241462,2.84831672011889,7.42210695324124,3.64319186208885,4.26251669636998,3.45923245884088,3.3158980921577,4.11560474974967,4.39833069653864,5.6854842578906,10.8449517689934,6.19227386364912,2.75003644910596,2.87093973998512,3.39412677194655,7.45567044872489,18.737971008739,17.1746299587033,2.29911349687732,0.599075622529601,0,0.889491589511453,16.027598416316,10.0650132620098,3.01570445070875,9.21268897019065,12.0186264945255,10.8049783170971,11.0324058886075,4.9901288286655,7.2156042953854,10.867078612648,3.57751155007006,8.45782879257574,3.67843367093557,6.84236093260327,4.82255417074288,10.2735113718505,7.94305065766069,6.8402258928602,5.69147415625834,7.76044774558232,7.18603104637713,5.63043597324636,5.2606975782618,6.39508673218875,3.48252166522167,3.49829631893504,3.38358253591438,0,0,0.568326998791185,5.79952163099405,5.8631514995274,5.58192390529146,4.97163944728941,5.50939848892731,7.0962871928194,3.72054311600653,3.75582761959467,6.53885917256149,5.26591519723137,5.58169377868924,5.35054143002648,4.9707995724613,7.24515380460467,5.90508242545636,11.1453672738987,10.5991750750663,0.66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|EntrezGene=208117
|HGNC=
|MCL_coexpression_id=3
|UniProt=F8WHK7
|association_with_transcript=0bp_to_ENSMUST00000113730_5end
|description=CAGE_peak_1_at_Aph1b_5end
|id=chr9:66643138..66643218,-
|ontology_enrichment_celltype=CL:0000393!2.59e-09!39;CL:0000211!2.59e-09!39;CL:0000221!7.38e-09!44;CL:0000133!7.38e-09!44;CL:0000540!7.62e-09!33;CL:0000047!7.62e-09!33;CL:0000031!7.62e-09!33;CL:0000404!7.62e-09!33;CL:0000055!1.60e-08!50;CL:0002319!1.87e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000393,2.46e-09,39;CL:0000211,2.46e-09,39;CL:0000221,7.03e-09,44;CL:0000133,7.03e-09,44;CL:0000540,7.26e-09,33;CL:0000047,7.26e-09,33;CL:0000031,7.26e-09,33;CL:0000404,7.26e-09,33;CL:0002319,1.78e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.58e-17!75;UBERON:0001016!4.58e-17!75;UBERON:0001017!4.77e-17!73;UBERON:0005743!4.77e-17!73;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0000033!2.98e-12!63;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0000955!1.53e-10!50;UBERON:0006238!1.53e-10!50;UBERON:0002616!5.21e-10!49;UBERON:0004111!1.17e-09!122;UBERON:0001049!2.26e-09!52;UBERON:0005068!2.26e-09!52;UBERON:0006241!2.26e-09!52;UBERON:0007135!2.26e-09!52;UBERON:0000025!5.38e-09!114;UBERON:0003056!3.28e-08!49;UBERON:0003080!3.20e-07!40;UBERON:0002780!9.45e-07!39;UBERON:0001890!9.45e-07!39;UBERON:0006240!9.45e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.32e-17,95;UBERON:0000924,3.32e-17,95;UBERON:0006601,3.32e-17,95;UBERON:0001016,4.13e-17,75;UBERON:0001017,4.30e-17,73;UBERON:0010314,3.14e-13,92;UBERON:0002346,5.70e-12,64;UBERON:0003075,5.70e-12,64;UBERON:0007284,5.70e-12,64;UBERON:0010371,2.69e-11,73;UBERON:0000073,5.56e-10,54;UBERON:0004111,1.08e-09,122;UBERON:0000955,1.87e-09,47;UBERON:0006238,1.87e-09,47;UBERON:0001049,2.14e-09,52;UBERON:0005068,2.14e-09,52;UBERON:0006241,2.14e-09,52;UBERON:0007135,2.14e-09,52;UBERON:0000025,5.00e-09,114;UBERON:0002616,6.15e-09,46;UBERON:0003056,3.14e-08,49;UBERON:0003080,3.08e-07,40;UBERON:0002780,9.13e-07,39;UBERON:0001890,9.13e-07,39;UBERON:0006240,9.13e-07,39
|phase1_expression=9.44878197918284,0.697950815278722,1.36499771816861,0.60492842261366,0.500895729946347,0.839396359559449,1.63528848416868,0.129123323441576,0.281577444303333,0,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0.809901069559304,0.699561878128147,0,0.822686601634433,1.69755860719212,5.78294373027274,0.992909512008853,0.783599367416806,1.27993938234725,0.22940928106717,1.14846392823004,0.430761996159075,1.50829862880122,2.66032787238923,2.01624103807945,1.99557459589774,1.90509202037889,4.92051830067656,0,1.44425809875637,0.997407872150954,0.612508068787107,51.8979222113766,25.0027310247616,34.0290433582969,32.3527318417058,28.0048648832963,29.1306211818692,6.29484089877886,4.76471576731718,6.9747765821439,3.9119567217402,4.79655344036982,3.29529274101708,6.61061656852564,7.69925318939494,8.62515386189829,0.167782606057736,0,0,7.20326420900652,5.15760191889762,5.15672092277442,6.67644320836673,6.87688273053643,6.33831403506179,5.76035704517525,6.22506357277798,3.1496490104849,2.96659908770092,2.1314403448383,1.49800055259202,6.14749288514487,5.80661828927475,4.59020190327748,3.99617426567626,3.71346279724945,4.41737081903227,7.59442955132715,6.3258010872036,3.67687514644008,9.91042928994498,8.04430229936683,9.21639199537461,7.78129097608144,6.77008562657831,4.68822033501084,8.37548997004143,12.380777420697,11.6126668310376,5.59794312399969,7.11858403995515,5.03278503728312,3.40767869999328,7.93501381121248,12.1743085254705,1.72084775396277,2.03991400112325,2.69851595818909,0,0.448026887097336,5.05599912474307,9.37366774179318,7.79358013808606,4.59341446863442,10.7040999030277,5.13305909657271,0,0,1.5154372870785,1.26679932737549,2.02209778005913,3.08296475241462,2.84831672011889,7.42210695324124,3.64319186208885,4.26251669636998,3.45923245884088,3.3158980921577,4.11560474974967,4.39833069653864,5.6854842578906,10.8449517689934,6.19227386364912,2.75003644910596,2.87093973998512,3.39412677194655,7.45567044872489,18.737971008739,17.1746299587033,2.29911349687732,0.599075622529601,0,0.889491589511453,16.027598416316,10.0650132620098,3.01570445070875,9.21268897019065,12.0186264945255,10.8049783170971,11.0324058886075,4.9901288286655,7.2156042953854,10.867078612648,3.57751155007006,8.45782879257574,3.67843367093557,6.84236093260327,4.82255417074288,10.2735113718505,7.94305065766069,6.8402258928602,5.69147415625834,7.76044774558232,7.18603104637713,5.63043597324636,5.2606975782618,6.39508673218875,3.48252166522167,3.49829631893504,3.38358253591438,0,0,0.568326998791185,5.79952163099405,5.8631514995274,5.58192390529146,4.97163944728941,5.50939848892731,7.0962871928194,3.72054311600653,3.75582761959467,6.53885917256149,5.26591519723137,5.58169377868924,5.35054143002648,4.9707995724613,7.24515380460467,5.90508242545636,11.1453672738987,10.5991750750663,0.660837565967596,1.85115396664481,6.18535926552179,7.43157349953403,5.02583099156164,8.67239155880373,9.11749979763968,12.935342575654,1.89811624617805,14.493508015713,11.3100843960121,13.131127154716,9.35827618171777,2.69645822596266,2.80979464837102,2.19055400579804,8.15571974098251,5.02693455482807,12.3978509240388,5.7022371796688,6.98228953803453,8.62670584650918,11.7619959051119,12.1040321343274,14.7578804170892,18.7563689161137,3.85388415213294,1.16791574001266,2.16214894624523,0.674586337154561,2.23146133527353,2.894125917029,1.2731292589071,2.5892652370573,3.56697498905078,4.3929826110093,1.43768206527355,4.46569137202204,4.99260276983297,4.79899868099512,3.58794827043824,11.0962009913574,11.6394509804961,5.49525094134406,4.56301934037672,5.60158783058121,4.22442446919304,3.35012514883632,4.99891645860629,5.85400943573396,5.35959489961049,7.30833475840957,6.69710028361446,8.02930242107116,5.35323443784276,6.50920763616802,1.50791283939272,2.17562273527484,1.96705709207614,2.20749397043786,13.1651483789989,14.1826140776566,0.327869890753351,3.7870639080656,14.5133780931478,14.055794794679,14.4333676480975,11.2315335037699,11.3627323782021,8.49229592366497,18.2164815753702,19.2888866221466,16.602086673754,16.708708453934,9.509985708954,4.27357448801413,5.21238269931443,7.58862565673663,2.65490276679926,5.34117399540959,3.32555912661226,4.14931175462976,4.42952839321159,5.84126781093462,5.16856586336442,6.18007340111759,2.13898427030833,4.10847785316561,1.05418608574999,7.21948802737308,17.702859499197,6.48219938512717,6.46793418913772,5.78709994585299,4.43350584105684,5.70780216326626,6.91105886528908,5.17590413494819,3.05073220482823,5.08396970073168,9.48272111636336,2.4732937941222,5.00539722757307,4.22190474497091,4.17803204010978,6.23735419031233,4.08073171281791,15.2048747648618,2.22132145037209,2.27025554759545,2.40752885580625,3.01389531207506,1.23024804948923,2.28778173206523,0.679913719975421,0.839708713941948,0.829199842826543,2.86401185404534,6.32671987162271,5.69294507955176,5.29226170026826,7.73626695253534,7.64268973111622,5.39457385539283,5.12451425497083,4.4498510137285,6.73997861117323,6.21339313086926,0.56369293868419,4.48549638131936,3.64008679005615,3.11121901350476,4.52059382172059,3.71703476079712,3.99014611395563,2.604087696879,2.41176492179135,2.65742532908607,3.16833006883652,0.632022241256357,2.02725215290164,1.43795340030758,1.03936658382236,0.179026695667481,0.39736270956253,0,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0.467507608726276,3.40095575422817,0.887943813496259,0.269141569828427,1.17519231454855,5.02292944483695,6.94425159169373,3.47988086107804,2.57242054894879,3.51100472824754,7.34177395402186,3.68260189205742,6.87474616127276,6.8741272937475,5.48066015816514,5.2877572817279,9.45031500324528,9.45674526770863,3.62513927187364,5.69536342927002,3.1136204275253,5.58634822761443,5.46347538413229,3.64660075602441,2.30574478890781,1.10306105070008,3.77819437262746,2.88449080134452,1.92551525755089,2.27427490587418,3.54871019846336,5.09291121742406,3.7456602987953,3.45735822986294,3.79074095107048,2.85776214769844,2.66533949673168,3.8581844092741,3.29668720642645,2.94397840268795,2.74295401908332,3.72699192934609,1.90748951957857,3.63366041580821,3.76437521661322,4.14611578669215,4.57319932181931,1.31534855718921,3.39510284614654,2.24456908663095,2.84724043498018,3.74317033027141,3.6830793885272,2.94379998253335,1.54325288784913,3.99696924700713,4.21076895201735,4.51229213501426,4.59091996965224,4.63241980150983,4.40548887678801
|short_description=p1@Aph1b
}}

Revision as of 18:34, 14 September 2013

Short description:p1@Aph1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Aph1b_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000113730_5end
EntrezGene:Aph1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Aph1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G851.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F97.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H110.84
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I217.17
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A416.03
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.22
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C68.46
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C610.27
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G86.84
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G110.60
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F712.94
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E914.49
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F213.13
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G78.63
kidney, neonate N10.CNhs11206.758-6D511.76
kidney, neonate N20.CNhs11113.832-19I112.10
kidney, neonate N25.CNhs11122.1353-25F314.76
kidney, neonate N30.CNhs11203.1385-42H118.76
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B111.64
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A314.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I79.51
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G817.70
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C76.47
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A95.12
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I16.74
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell2.46e-0939
electrically active cell2.46e-0939
ectodermal cell7.03e-0944
neurectodermal cell7.03e-0944
neuron7.26e-0933
neuronal stem cell7.26e-0933
neuroblast7.26e-0933
electrically signaling cell7.26e-0933
neural cell1.78e-0843







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