FFCP PHASE1:Mm9::chr9:56008747..56008775,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56434|HGNC=|MCL_coexpression_id=620|UniProt=E9PZV2|association_with_transcript=-20bp_to_ENSMUST00000171927_5end|description=CAGE_peak_2_at_Tspan3_5end|id=chr9:56008747..56008775,-|ontology_enrichment_celltype=CL:0000221!5.35e-17!44;CL:0000133!5.35e-17!44;CL:0002319!2.44e-16!43;CL:0000055!2.50e-13!50;CL:0000540!8.51e-13!33;CL:0000047!8.51e-13!33;CL:0000031!8.51e-13!33;CL:0000404!8.51e-13!33;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23|ontology_enrichment_celltype_v019_2=CL:0000221,5.35e-17,44;CL:0000133,5.35e-17,44;CL:0002319,2.44e-16,43;CL:0000540,8.51e-13,33;CL:0000047,8.51e-13,33;CL:0000031,8.51e-13,33;CL:0000404,8.51e-13,33;CL:0000393,1.04e-10,39;CL:0000211,1.04e-10,39;CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.23e-36!73;UBERON:0005743!2.23e-36!73;UBERON:0000073!4.74e-35!75;UBERON:0001016!4.74e-35!75;UBERON:0004121!1.05e-28!102;UBERON:0000924!1.05e-28!102;UBERON:0006601!1.05e-28!102;UBERON:0002346!1.19e-27!71;UBERON:0003075!1.19e-27!71;UBERON:0007284!1.19e-27!71;UBERON:0000033!3.05e-27!63;UBERON:0001049!5.66e-27!52;UBERON:0005068!5.66e-27!52;UBERON:0006241!5.66e-27!52;UBERON:0007135!5.66e-27!52;UBERON:0000955!1.52e-25!50;UBERON:0006238!1.52e-25!50;UBERON:0002616!4.64e-25!49;UBERON:0003056!2.40e-22!49;UBERON:0003080!1.59e-20!40;UBERON:0002780!7.07e-20!39;UBERON:0001890!7.07e-20!39;UBERON:0006240!7.07e-20!39;UBERON:0002020!6.92e-18!34;UBERON:0002791!2.97e-15!29;UBERON:0003528!2.97e-15!29;UBERON:0001893!2.97e-15!29;UBERON:0000153!1.21e-14!94;UBERON:0007811!1.74e-14!86;UBERON:0000956!1.68e-11!21;UBERON:0001869!1.68e-11!21;UBERON:0000203!1.68e-11!21;UBERON:0002619!2.26e-10!17;UBERON:0000025!2.75e-09!114;UBERON:0004111!2.71e-08!122;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10;UBERON:0003076!6.03e-07!12;UBERON:0003057!6.03e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-36,73;UBERON:0001016,4.73e-35,75;UBERON:0010314,6.92e-33,92;UBERON:0004121,2.68e-30,95;UBERON:0000924,2.68e-30,95;UBERON:0006601,2.68e-30,95;UBERON:0002346,3.33e-30,64;UBERON:0003075,3.33e-30,64;UBERON:0007284,3.33e-30,64;UBERON:0000073,5.61e-28,54;UBERON:0001049,5.65e-27,52;UBERON:0005068,5.65e-27,52;UBERON:0006241,5.65e-27,52;UBERON:0007135,5.65e-27,52;UBERON:0010371,9.07e-26,73;UBERON:0000955,5.16e-24,47;UBERON:0006238,5.16e-24,47;UBERON:0002616,1.54e-23,46;UBERON:0003056,2.40e-22,49;UBERON:0003080,1.59e-20,40;UBERON:0002780,7.07e-20,39;UBERON:0001890,7.07e-20,39;UBERON:0006240,7.07e-20,39;UBERON:0002020,6.92e-18,34;UBERON:0003528,2.97e-15,29;UBERON:0002791,2.97e-15,29;UBERON:0001893,2.97e-15,29;UBERON:0000956,1.68e-11,21;UBERON:0001869,1.68e-11,21;UBERON:0000203,1.68e-11,21;UBERON:0002619,2.26e-10,17;UBERON:0000025,2.94e-09,114;UBERON:0004111,2.89e-08,122;UBERON:0002021,1.38e-07,10;UBERON:0000411,1.38e-07,10;UBERON:0001950,1.38e-07,10;UBERON:0003076,6.03e-07,12;UBERON:0003057,6.03e-07,12|phase1_expression=177.444922592112,36.6424178021329,46.8649216571222,8.77146212789807,10.0179145989269,20.6491504451624,17.7545606852599,8.90950931746876,44.2076587556234,48.6854214749746,10.7867319982068,13.0826340752352,5.9920255475922,5.68232615723483,1.33243904726265,1.21485160433896,2.09868563438444,2.99689057090326,2.4680598049033,2.54633791078818,53.2370996345697,11.9149141441062,12.015190300391,45.7578329189143,52.5347253643819,47.0870210574317,48.2453435698164,45.6799013294085,41.0450586025768,20.9185007700743,48.3372513228564,4.44521471421742,4.30545351309199,0,28.5963103553762,29.2572975830947,32.8712663582414,0.418531630736908,0,0,0,0,0,64.7109644394467,55.6559352395135,58.184320435253,100.928483420897,244.406200302481,316.348103137639,300.783053867916,96.0306852349987,248.691936351401,4.02678254538567,4.35217285206807,7.39406358113421,15.6928255981928,16.6189395164479,31.9716697212014,137.777509845386,133.834717755824,145.781222806421,58.958948580029,60.4720461355575,15.2982951937838,2.96659908770092,10.6572017241915,148.901254927647,250.510335069654,90.0025834837586,89.2389252372475,91.4913581878512,182.816630018434,160.350560730871,93.7054613994398,74.9511583362608,105.710160460152,123.329786719315,140.966821246047,117.662604474283,124.896314480494,94.4152481976868,103.661760740795,143.220878487708,158.136293418902,156.007010980123,125.511777411782,115.463433128072,124.14203091965,21.809143679957,41.0353571379845,15.6526823898906,6.88339101585109,0.679971333707751,0.539703191637817,0.649776417447669,0,33.2853275712252,16.5317412900716,9.09251016110041,13.0735642568826,201.828620539983,16.6824420638613,5.09610479413291,0,8.65964164044856,8.36087556067825,10.1104889002957,18.4977885144877,16.0541487861246,30.2821963692243,64.0160855767041,47.8010800950062,47.0455614402359,47.929799695734,47.2706602685533,27.3953169098693,9.14621380617183,24.4372913194651,9.73071607144862,71.8244813766497,29.1510804367719,31.0320162006542,22.3670113461747,92.2259510586373,101.791099511339,21.9693067479389,18.2118989248999,15.5974710058286,18.4251829255944,162.822425033042,156.46520616397,101.78002521142,148.793618084589,196.645186687024,151.477484483919,171.002291273417,88.9057646413261,42.795997889872,89.4638564855209,31.3558365270846,91.9951531746315,107.134380665998,95.7930530564458,86.9566798912076,92.5296388458059,96.4696313744919,95.388355601804,84.3372988609191,67.6883497809125,59.3793091726953,81.8172727362362,93.1581862817193,63.1167255742107,50.4965641457142,37.8639130990616,72.4484731219315,10.5331978096985,9.26452465612975,10.2298859782413,72.0797688423547,91.9342155125897,87.1500377471312,81.6769337768975,89.5277254450687,93.794404635526,94.641315513416,89.0667692646736,96.448172795282,125.065485934245,123.782267915638,124.278485033797,132.457188607351,97.2607010739354,98.3733049513525,149.936733326223,97.2448586984238,23.1293148088659,19.5693419331023,79.343229199107,67.3486348395272,51.4181170675152,34.2861991859682,36.4699991905587,33.0992589435853,35.1151505542939,42.6570292735188,39.9622981992429,43.571467377012,40.3575660336579,17.9763881730844,25.9365659849633,28.8754846218832,80.0398542022005,66.3783858262524,59.7350999067326,70.2597081066334,57.022031227282,58.2127305089644,68.5484062426949,50.3350604610443,76.7723779144323,83.7866743029026,1.48226313543574,14.5155241973002,11.596980711679,7.19558759631532,6.08580364165509,3.61765739628625,8.65727896056827,2.87696137450811,5.99900339067631,5.76578967694971,8.62609239164127,9.30352369171258,9.98520553966594,4.04126204715379,3.22915344339442,2.8946611281802,16.0735275444946,80.533850002456,58.8303564955713,58.9015447639903,44.1217666782384,39.1964642413849,30.9456733151818,26.3430424608028,37.6747994413796,34.5484915852089,30.1369512762651,14.5838350097007,17.6138681503213,12.43981903801,6.03165135757089,33.72215239676,8.85175691434265,8.82997588175144,143.21112626911,154.367791241932,28.8525503862949,103.765551080997,97.8075480190396,88.6295949553369,107.711698866399,81.0104225059151,67.9535955951302,58.8799184040771,85.0102473517278,78.9090816360542,86.9633111482352,118.246244443225,36.478601898525,93.8405731326435,82.9094623109702,33.6539050863972,6.63725691699814,63.8513073087601,44.7438864307832,25.4616857670462,27.7583779307926,29.821209350561,31.528251766523,30.5368332761105,34.580245703318,15.1697643809192,7.37930260024991,9.28219889233682,78.9819885348788,102.814884691878,140.095454536723,141.891117190914,117.75391513847,135.917039012778,140.524863594211,99.8645033095886,12.4376005273766,26.9026729997052,10.3648347085832,10.5527201882547,36.9753537133624,26.1154964938915,23.2776070806116,18.0554989719567,25.9417944600567,138.883551205872,5.63873906632914,47.2625927635779,23.5197049759534,7.91147519419702,4.10082683163076,5.94823250336959,39.2650173285806,34.8479116285908,36.4847930843679,19.0934123603023,73.7062865044045,49.8132694460779,53.5706490476134,39.0995113547056,36.0298230181193,31.6931214004329,39.1777380138092,17.275892170946,48.2167700645469,5.59205381778233,64.8246879486819,53.5269234837444,74.1254037247797,68.0579159204167,65.0965510327765,62.1758541806064,57.5050469364194,53.9046153253953,51.5907974574497,54.5980113066774,63.9426613892461,20.8567339614598,49.0595021002197,51.8690333682378,31.700680806582,24.526657306445,32.3850608293462,23.077526307834,29.68559496209,26.2512769865184,29.4158273688299,26.4164605058522,25.8263383960344,18.9537328031449,25.1285339690373,37.4105132965099,20.422707710414,5.02397597013064,14.4380770073107,25.1146472241848,11.8239959534245,16.6667978083211,10.9327873330324,8.52672576860118,239.454781269636,234.76587061866,229.158205375759,247.984142121941,174.010960021743,150.32338558055,187.656255064442,167.069166396186,150.443279782756,159.470176019561,29.6831814090745,88.9825467684299,76.317921772098,52.9972643208881,22.4286084011941,22.0612210140017,59.3398763230313,61.3984470571905,60.0118921936695,60.9000280350752,63.3698249725599,57.7196604641393,57.1213195566283,59.6074168889333,56.3441950454566,60.0130051016673,55.9721294313652,56.3294923754019,52.3349094020199,52.6972134081142,60.3449884198331,50.2256531430925,55.7940684476731,56.9757953198728,54.4893312604764,63.5455705266491,58.9028072650328,64.7151490137094,60.7044388891002,72.3873530438483,61.9274794608189,52.6998980709265,58.1108081300959,58.5661259682951,53.4351312417762,79.4397637842668,61.9918762380332,68.1141241333106,83.7842894461534,70.1480712800059,71.8790290423307|short_description=p2@Tspan3}} | ||
|EntrezGene=56434 | |||
|HGNC= | |||
|MCL_coexpression_id=620 | |||
|UniProt=E9PZV2 | |||
|association_with_transcript=-20bp_to_ENSMUST00000171927_5end | |||
|description=CAGE_peak_2_at_Tspan3_5end | |||
|id=chr9:56008747..56008775,- | |||
|ontology_enrichment_celltype=CL:0000221!5.35e-17!44;CL:0000133!5.35e-17!44;CL:0002319!2.44e-16!43;CL:0000055!2.50e-13!50;CL:0000540!8.51e-13!33;CL:0000047!8.51e-13!33;CL:0000031!8.51e-13!33;CL:0000404!8.51e-13!33;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.35e-17,44;CL:0000133,5.35e-17,44;CL:0002319,2.44e-16,43;CL:0000540,8.51e-13,33;CL:0000047,8.51e-13,33;CL:0000031,8.51e-13,33;CL:0000404,8.51e-13,33;CL:0000393,1.04e-10,39;CL:0000211,1.04e-10,39;CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-36!73;UBERON:0005743!2.23e-36!73;UBERON:0000073!4.74e-35!75;UBERON:0001016!4.74e-35!75;UBERON:0004121!1.05e-28!102;UBERON:0000924!1.05e-28!102;UBERON:0006601!1.05e-28!102;UBERON:0002346!1.19e-27!71;UBERON:0003075!1.19e-27!71;UBERON:0007284!1.19e-27!71;UBERON:0000033!3.05e-27!63;UBERON:0001049!5.66e-27!52;UBERON:0005068!5.66e-27!52;UBERON:0006241!5.66e-27!52;UBERON:0007135!5.66e-27!52;UBERON:0000955!1.52e-25!50;UBERON:0006238!1.52e-25!50;UBERON:0002616!4.64e-25!49;UBERON:0003056!2.40e-22!49;UBERON:0003080!1.59e-20!40;UBERON:0002780!7.07e-20!39;UBERON:0001890!7.07e-20!39;UBERON:0006240!7.07e-20!39;UBERON:0002020!6.92e-18!34;UBERON:0002791!2.97e-15!29;UBERON:0003528!2.97e-15!29;UBERON:0001893!2.97e-15!29;UBERON:0000153!1.21e-14!94;UBERON:0007811!1.74e-14!86;UBERON:0000956!1.68e-11!21;UBERON:0001869!1.68e-11!21;UBERON:0000203!1.68e-11!21;UBERON:0002619!2.26e-10!17;UBERON:0000025!2.75e-09!114;UBERON:0004111!2.71e-08!122;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10;UBERON:0003076!6.03e-07!12;UBERON:0003057!6.03e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-36,73;UBERON:0001016,4.73e-35,75;UBERON:0010314,6.92e-33,92;UBERON:0004121,2.68e-30,95;UBERON:0000924,2.68e-30,95;UBERON:0006601,2.68e-30,95;UBERON:0002346,3.33e-30,64;UBERON:0003075,3.33e-30,64;UBERON:0007284,3.33e-30,64;UBERON:0000073,5.61e-28,54;UBERON:0001049,5.65e-27,52;UBERON:0005068,5.65e-27,52;UBERON:0006241,5.65e-27,52;UBERON:0007135,5.65e-27,52;UBERON:0010371,9.07e-26,73;UBERON:0000955,5.16e-24,47;UBERON:0006238,5.16e-24,47;UBERON:0002616,1.54e-23,46;UBERON:0003056,2.40e-22,49;UBERON:0003080,1.59e-20,40;UBERON:0002780,7.07e-20,39;UBERON:0001890,7.07e-20,39;UBERON:0006240,7.07e-20,39;UBERON:0002020,6.92e-18,34;UBERON:0003528,2.97e-15,29;UBERON:0002791,2.97e-15,29;UBERON:0001893,2.97e-15,29;UBERON:0000956,1.68e-11,21;UBERON:0001869,1.68e-11,21;UBERON:0000203,1.68e-11,21;UBERON:0002619,2.26e-10,17;UBERON:0000025,2.94e-09,114;UBERON:0004111,2.89e-08,122;UBERON:0002021,1.38e-07,10;UBERON:0000411,1.38e-07,10;UBERON:0001950,1.38e-07,10;UBERON:0003076,6.03e-07,12;UBERON:0003057,6.03e-07,12 | |||
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| |||
|short_description=p2@Tspan3 | |||
}} |
Revision as of 18:16, 14 September 2013
Short description: | p2@Tspan3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tspan3_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | -20bp_to_ENSMUST00000171927_5end |
EntrezGene: | Tspan3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.35e-17 | 44 |
neurectodermal cell | 5.35e-17 | 44 |
neural cell | 2.44e-16 | 43 |
neuron | 8.51e-13 | 33 |
neuronal stem cell | 8.51e-13 | 33 |
neuroblast | 8.51e-13 | 33 |
electrically signaling cell | 8.51e-13 | 33 |
electrically responsive cell | 1.04e-10 | 39 |
electrically active cell | 1.04e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.22e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.