FFCP PHASE1:Mm9::chr9:51856036..51856066,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19684|HGNC=|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46|association_with_transcript=0bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end|description=CAGE_peak_5_at_Rdx_5end|id=chr9:51856036..51856066,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.90e-10!66;UBERON:0005177!6.78e-08!85;UBERON:0002100!5.86e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.34e-09,66;UBERON:0001048,6.52e-07,134|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.258246646883153,2.111830832275,2.57470978954193,1.02730780935303,0.478632953972018,0,0.34968160967599,0.666219523631325,0.607425802169478,0,0,0.137114433605739,0,0.850432901510698,0.198581902401771,0.783599367416806,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,1.45653105909346,0.881277725829041,0.506884656097573,0.734187008646726,0,1.30815093828268,1.31811709640683,0.972149495371417,0,1.43752564364972,0.503347818173209,0,0.336093799142464,2.05807548828758,3.15186783932632,3.6097046459421,0.202316460859598,1.05798195854407,0.633831403506179,1.35537812827653,1.77858959222228,0,0.988866362566974,0,0.599200221036809,0.768436610643109,2.07379224616955,1.21505344498522,1.68259969081106,1.42825492201902,1.32521124570968,1.46988959057945,1.0543001812006,0,1.10115880999389,1.53224805702225,1.22885226604995,0.395658863190582,0.457438218012048,0,1.95428099300967,0.56276261003168,1.06958773443767,3.53554302568401,1.56608848879013,0.745597783301202,3.71058347332602,2.56943304363071,4.63783181922684,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,1.54488862144927,1.53387290320252,1.03914401841148,0.70667914902068,0.845060518660083,0,0,7.11066703153331,1.08245520505607,1.26679932737549,2.02209778005913,1.48439043634778,0,1.1875371125186,2.60227990149204,0.608930956624282,1.84492397804847,1.95939432718409,1.76383060703557,1.50799909595611,0.988779870937496,0.578397427679647,0,1.94120219936891,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,3.23500836165985,1.19980546198682,1.52484272487678,0.149790639404823,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0.83115217823824,0.486723789203273,1.2220723662038,0.870848794270651,1.0108910337347,0.210441855886474,1.17108398666433,1.14951052216736,1.44049703844279,1.65775299619287,1.63287597963187,1.0249097622788,1.12442069471675,0.258703370739016,1.07783996466421,1.89106080167819,0.879755620819744,1.31517439456545,0.834141747676794,2.43776516565517,1.4404749548556,1.39323986772945,0.702213187313235,1.02939162845886,1.98914449576915,1.44988040774851,0.703578179943289,1.98068267607116,2.13070262026689,0.393528463494808,1.54267112887378,1.16266972375204,1.60964040839772,2.56883753207773,1.81015834904829,0.164167464079095,0.729619285912702,0.438599962275997,1.3173006917463,1.61047702512446,0.210289948564127,0.514523061896422,0,0.264450566663544,1.2797295032114,0,1.28867461322093,0,1.11189021922435,1.90225626112559,0,0.329397909448022,0,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0.379335801906163,2.05647322697512,2.25415471346161,0.814605311381257,1.55161989734101,2.17421041659988,2.02356918797623,2.80459281161244,1.56998727841375,1.23397163921801,1.48226313543574,2.00214126859313,0.982794975566015,1.57403478669398,2.23146133527353,0.482354319504834,0.50925170356284,1.15078454980324,2.10775794807546,1.09824565275233,5.75072826109418,1.48856379067401,1.87222603868736,2.27320990152401,1.25578189465339,1.92977408545347,2.21703828199926,1.32643988239339,1.30371981153621,0.848725428875941,1.64283173801951,1.84256883185997,0.714130922658041,4.87834119644497,1.89162172927429,1.10732344824387,2.39182152986231,2.45794972073607,1.38147985492716,3.32692834737477,0,1.08781136763742,0.491764273019036,0.551873492609465,0.642202359951168,0.937693492737625,1.3114795630134,2.01976741763498,0.94652465824877,1.95219372148319,0.215423397732799,1.91175038362042,1.11399337041197,0.849229592366497,0.809621403349789,1.46127928955656,0.790575555893047,0.321321316421807,1.13552068166615,1.78065603667255,0.81443479676788,0.494910368917606,0,0.485561272309963,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.517434735131018,1.07168517515796,1.06404140185364,1.60531935841864,0.658196082408484,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,1.15420377059036,1.61464426695906,1.62844897306021,1.79058516004705,0.328281799490123,0,0.741701208042039,0.341741761595705,2.06386867963222,0.555583582109135,0.941842285023455,0.683471138605126,0,2.88963330989554,1.39951452323658,1.10559979043539,0,1.10717597753397,1.42323626988794,0.756037385752609,0.83635318405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| ||
|EntrezGene=19684 | |||
|HGNC= | |||
|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46 | |||
|association_with_transcript=0bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end | |||
|description=CAGE_peak_5_at_Rdx_5end | |||
|id=chr9:51856036..51856066,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.90e-10!66;UBERON:0005177!6.78e-08!85;UBERON:0002100!5.86e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.34e-09,66;UBERON:0001048,6.52e-07,134 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.258246646883153,2.111830832275,2.57470978954193,1.02730780935303,0.478632953972018,0,0.34968160967599,0.666219523631325,0.607425802169478,0,0,0.137114433605739,0,0.850432901510698,0.198581902401771,0.783599367416806,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,1.45653105909346,0.881277725829041,0.506884656097573,0.734187008646726,0,1.30815093828268,1.31811709640683,0.972149495371417,0,1.43752564364972,0.503347818173209,0,0.336093799142464,2.05807548828758,3.15186783932632,3.6097046459421,0.202316460859598,1.05798195854407,0.633831403506179,1.35537812827653,1.77858959222228,0,0.988866362566974,0,0.599200221036809,0.768436610643109,2.07379224616955,1.21505344498522,1.68259969081106,1.42825492201902,1.32521124570968,1.46988959057945,1.0543001812006,0,1.10115880999389,1.53224805702225,1.22885226604995,0.395658863190582,0.457438218012048,0,1.95428099300967,0.56276261003168,1.06958773443767,3.53554302568401,1.56608848879013,0.745597783301202,3.71058347332602,2.56943304363071,4.63783181922684,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,1.54488862144927,1.53387290320252,1.03914401841148,0.70667914902068,0.845060518660083,0,0,7.11066703153331,1.08245520505607,1.26679932737549,2.02209778005913,1.48439043634778,0,1.1875371125186,2.60227990149204,0.608930956624282,1.84492397804847,1.95939432718409,1.76383060703557,1.50799909595611,0.988779870937496,0.578397427679647,0,1.94120219936891,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,3.23500836165985,1.19980546198682,1.52484272487678,0.149790639404823,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0.83115217823824,0.486723789203273,1.2220723662038,0.870848794270651,1.0108910337347,0.210441855886474,1.17108398666433,1.14951052216736,1.44049703844279,1.65775299619287,1.63287597963187,1.0249097622788,1.12442069471675,0.258703370739016,1.07783996466421,1.89106080167819,0.879755620819744,1.31517439456545,0.834141747676794,2.43776516565517,1.4404749548556,1.39323986772945,0.702213187313235,1.02939162845886,1.98914449576915,1.44988040774851,0.703578179943289,1.98068267607116,2.13070262026689,0.393528463494808,1.54267112887378,1.16266972375204,1.60964040839772,2.56883753207773,1.81015834904829,0.164167464079095,0.729619285912702,0.438599962275997,1.3173006917463,1.61047702512446,0.210289948564127,0.514523061896422,0,0.264450566663544,1.2797295032114,0,1.28867461322093,0,1.11189021922435,1.90225626112559,0,0.329397909448022,0,0.795825888164603,0.779856348476481,0,0,0.199141273254367,0.379335801906163,2.05647322697512,2.25415471346161,0.814605311381257,1.55161989734101,2.17421041659988,2.02356918797623,2.80459281161244,1.56998727841375,1.23397163921801,1.48226313543574,2.00214126859313,0.982794975566015,1.57403478669398,2.23146133527353,0.482354319504834,0.50925170356284,1.15078454980324,2.10775794807546,1.09824565275233,5.75072826109418,1.48856379067401,1.87222603868736,2.27320990152401,1.25578189465339,1.92977408545347,2.21703828199926,1.32643988239339,1.30371981153621,0.848725428875941,1.64283173801951,1.84256883185997,0.714130922658041,4.87834119644497,1.89162172927429,1.10732344824387,2.39182152986231,2.45794972073607,1.38147985492716,3.32692834737477,0,1.08781136763742,0.491764273019036,0.551873492609465,0.642202359951168,0.937693492737625,1.3114795630134,2.01976741763498,0.94652465824877,1.95219372148319,0.215423397732799,1.91175038362042,1.11399337041197,0.849229592366497,0.809621403349789,1.46127928955656,0.790575555893047,0.321321316421807,1.13552068166615,1.78065603667255,0.81443479676788,0.494910368917606,0,0.485561272309963,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.517434735131018,1.07168517515796,1.06404140185364,1.60531935841864,0.658196082408484,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,1.15420377059036,1.61464426695906,1.62844897306021,1.79058516004705,0.328281799490123,0,0.741701208042039,0.341741761595705,2.06386867963222,0.555583582109135,0.941842285023455,0.683471138605126,0,2.88963330989554,1.39951452323658,1.10559979043539,0,1.10717597753397,1.42323626988794,0.756037385752609,0.836353184057875,0.655087691238533,0.404593039154462,1.1571483801547,0.523511883968059,0.259229946583586,1.24267862617385,0,1.79419855252775,0.992750942742586,2.33341426012857,1.42075805825504,1.18269287843545,1.99507305697782,2.21347454234715,1.57289016638566,1.93267296660805,1.72818003754719,0.632022241256357,0.608175645870493,1.33524244314275,0.51968329191118,0.537080087002444,0.79472541912506,1.32214994471966,0.443068581523732,0.706765149637033,0.990688486514998,0.705783295957884,0.877120926657772,0.481059208201647,0,0.906921534460845,0.443971906748129,0.448569283047378,0.335769232728157,0.386379188064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| |||
|short_description=p5@Rdx | |||
}} | |||
Revision as of 18:12, 14 September 2013
| Short description: | p5@Rdx |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Rdx_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000000590, ENSMUST00000061352, ENSMUST00000172248, NM_001104617, NM_009041, uc009plr.2, uc009pls.2_5end |
| EntrezGene: | Rdx |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| subdivision of trunk | 1.34e-09 | 66 |
| primordium | 6.52e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
