FFCP PHASE1:Mm9::chr9:51573430..51573469,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244867|HGNC=|MCL_coexpression_id=817|UniProt=Q6IFT4|association_with_transcript=0bp_to_ENSMUST00000065496,ENSMUST00000124907,ENSMUST00000146509,NM_175535,uc009pli.1,uc009plj.1_5end|description=CAGE_peak_1_at_Arhgap20_5end|id=chr9:51573430..51573469,+|ontology_enrichment_celltype=CL:0000117!9.44e-07!23;CL:0000337!9.44e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-07,23;CL:0000337,7.99e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.16e-15!73;UBERON:0005743!8.16e-15!73;UBERON:0001049!1.45e-14!52;UBERON:0005068!1.45e-14!52;UBERON:0006241!1.45e-14!52;UBERON:0007135!1.45e-14!52;UBERON:0000073!4.02e-14!75;UBERON:0001016!4.02e-14!75;UBERON:0000955!1.71e-13!50;UBERON:0006238!1.71e-13!50;UBERON:0002616!6.34e-13!49;UBERON:0000033!1.11e-12!63;UBERON:0002020!1.23e-12!34;UBERON:0004121!1.39e-12!102;UBERON:0000924!1.39e-12!102;UBERON:0006601!1.39e-12!102;UBERON:0002346!3.76e-12!71;UBERON:0003075!3.76e-12!71;UBERON:0007284!3.76e-12!71;UBERON:0003080!3.19e-10!40;UBERON:0002791!4.87e-10!29;UBERON:0003528!4.87e-10!29;UBERON:0001893!4.87e-10!29;UBERON:0003056!6.45e-10!49;UBERON:0002780!9.64e-10!39;UBERON:0001890!9.64e-10!39;UBERON:0006240!9.64e-10!39;UBERON:0000468!3.51e-09!333;UBERON:0002021!4.14e-08!10;UBERON:0000411!4.14e-08!10;UBERON:0001950!4.14e-08!10;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0000991!1.08e-07!18;UBERON:0005564!1.08e-07!18;UBERON:0004176!2.70e-07!17;UBERON:0009196!2.70e-07!17;UBERON:0009117!2.70e-07!17;UBERON:0002619!3.80e-07!17;UBERON:0007811!8.88e-07!86;UBERON:0000473!9.63e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-15,54;UBERON:0001017,6.31e-15,73;UBERON:0001049,1.15e-14,52;UBERON:0005068,1.15e-14,52;UBERON:0006241,1.15e-14,52;UBERON:0007135,1.15e-14,52;UBERON:0001016,4.03e-14,75;UBERON:0002346,5.98e-13,64;UBERON:0003075,5.98e-13,64;UBERON:0007284,5.98e-13,64;UBERON:0002020,8.68e-13,34;UBERON:0004121,1.05e-12,95;UBERON:0000924,1.05e-12,95;UBERON:0006601,1.05e-12,95;UBERON:0010371,1.96e-12,73;UBERON:0000955,3.54e-12,47;UBERON:0006238,3.54e-12,47;UBERON:0002616,1.29e-11,46;UBERON:0003080,2.42e-10,40;UBERON:0003528,3.72e-10,29;UBERON:0002791,3.72e-10,29;UBERON:0001893,3.72e-10,29;UBERON:0003056,4.94e-10,49;UBERON:0002780,7.43e-10,39;UBERON:0001890,7.43e-10,39;UBERON:0006240,7.43e-10,39;UBERON:0010314,9.93e-09,92;UBERON:0002021,3.36e-08,10;UBERON:0000411,3.36e-08,10;UBERON:0001950,3.36e-08,10;UBERON:0000956,8.78e-08,21;UBERON:0001869,8.78e-08,21;UBERON:0000203,8.78e-08,21;UBERON:0000991,8.90e-08,18;UBERON:0005564,8.90e-08,18;UBERON:0004176,2.25e-07,17;UBERON:0009196,2.25e-07,17;UBERON:0009117,2.25e-07,17;UBERON:0002619,3.18e-07,17;UBERON:0000473,8.16e-07,14|phase1_expression=19.6983081938897,0,0,0.30246421130683,0,0.16787927191189,0,14.4618122254565,0.703943610758334,2.57470978954193,0.171217968225505,0.239316476986009,0.856003649656029,0.699363219351979,0.666219523631325,0.404950534779652,0,0,0,0,13.8620562946244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92432498865675,4.96746962975621,0.550640256485045,10.9534788208725,0.218025156380447,1.75748946187577,4.6663175777828,0.839918529752175,0,0,2.90144856804538,1.34437519656986,1.28629718017973,0.85960031981627,0,10.5204559646991,14.2827564403449,12.6766280701236,2.03306719241479,2.66788438833342,0,0,0.7104801149461,2.99600110518405,4.2264013585371,8.70992743391212,10.5304631898719,8.62332341540666,22.2807767834967,27.1668305370485,7.10446635446733,4.31304619582064,10.1114066527102,25.3266526298594,24.2605942361857,23.5017995882053,7.38563211289086,8.05091263701205,9.89735404057844,22.6138229191119,25.3243174514256,27.8092810953794,38.3017161115768,38.0132387733605,34.2974980318553,0.302904773332736,4.76100828672749,0.579728977403356,0.860423876981386,0,0,0,0,6.17955448579708,0,0,0,1.26759077799012,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,2.16949371466214,1.03575153458869,1.48442139064825,10.0621489524359,4.56698217468212,5.76538743140146,4.82312449768392,12.9347577849275,2.01066546127481,0.247194967734374,4.62717942143717,10.6153266233985,16.3384518446883,11.9254419968613,9.21262980956922,5.59175283654366,33.6697916563279,36.2342802787277,1.02182822083437,0.11981512450592,0,0,29.6585466021549,48.0375632959558,30.6596619155389,46.9325664519146,57.0245469846637,25.973505569945,36.828766716381,39.2081550823718,7.46441823660558,3.28539585963777,5.6819301089348,3.90361328888111,5.0578462975364,6.12211241338187,7.38453607395004,7.62008790494872,5.63700369253339,8.71426038405478,12.6764651662118,1.07783996466421,2.64748512234947,12.1406275673125,9.42541649438572,10.0097009721215,9.05455632957633,9.05441400194951,21.0976322827603,0,0,0,1.24275463521301,0.938104239924385,1.98068267607116,2.60419209143731,1.18058539048442,1.07986979021165,0.930135779001631,1.3413670069981,2.6856028744449,2.46839774870221,7.71587081171748,10.7821516695988,16.5205985790626,16.0271584162467,26.0360452395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| ||
|EntrezGene=244867 | |||
|HGNC= | |||
|MCL_coexpression_id=817 | |||
|UniProt=Q6IFT4 | |||
|association_with_transcript=0bp_to_ENSMUST00000065496,ENSMUST00000124907,ENSMUST00000146509,NM_175535,uc009pli.1,uc009plj.1_5end | |||
|description=CAGE_peak_1_at_Arhgap20_5end | |||
|id=chr9:51573430..51573469,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.44e-07!23;CL:0000337!9.44e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-07,23;CL:0000337,7.99e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.16e-15!73;UBERON:0005743!8.16e-15!73;UBERON:0001049!1.45e-14!52;UBERON:0005068!1.45e-14!52;UBERON:0006241!1.45e-14!52;UBERON:0007135!1.45e-14!52;UBERON:0000073!4.02e-14!75;UBERON:0001016!4.02e-14!75;UBERON:0000955!1.71e-13!50;UBERON:0006238!1.71e-13!50;UBERON:0002616!6.34e-13!49;UBERON:0000033!1.11e-12!63;UBERON:0002020!1.23e-12!34;UBERON:0004121!1.39e-12!102;UBERON:0000924!1.39e-12!102;UBERON:0006601!1.39e-12!102;UBERON:0002346!3.76e-12!71;UBERON:0003075!3.76e-12!71;UBERON:0007284!3.76e-12!71;UBERON:0003080!3.19e-10!40;UBERON:0002791!4.87e-10!29;UBERON:0003528!4.87e-10!29;UBERON:0001893!4.87e-10!29;UBERON:0003056!6.45e-10!49;UBERON:0002780!9.64e-10!39;UBERON:0001890!9.64e-10!39;UBERON:0006240!9.64e-10!39;UBERON:0000468!3.51e-09!333;UBERON:0002021!4.14e-08!10;UBERON:0000411!4.14e-08!10;UBERON:0001950!4.14e-08!10;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0000991!1.08e-07!18;UBERON:0005564!1.08e-07!18;UBERON:0004176!2.70e-07!17;UBERON:0009196!2.70e-07!17;UBERON:0009117!2.70e-07!17;UBERON:0002619!3.80e-07!17;UBERON:0007811!8.88e-07!86;UBERON:0000473!9.63e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-15,54;UBERON:0001017,6.31e-15,73;UBERON:0001049,1.15e-14,52;UBERON:0005068,1.15e-14,52;UBERON:0006241,1.15e-14,52;UBERON:0007135,1.15e-14,52;UBERON:0001016,4.03e-14,75;UBERON:0002346,5.98e-13,64;UBERON:0003075,5.98e-13,64;UBERON:0007284,5.98e-13,64;UBERON:0002020,8.68e-13,34;UBERON:0004121,1.05e-12,95;UBERON:0000924,1.05e-12,95;UBERON:0006601,1.05e-12,95;UBERON:0010371,1.96e-12,73;UBERON:0000955,3.54e-12,47;UBERON:0006238,3.54e-12,47;UBERON:0002616,1.29e-11,46;UBERON:0003080,2.42e-10,40;UBERON:0003528,3.72e-10,29;UBERON:0002791,3.72e-10,29;UBERON:0001893,3.72e-10,29;UBERON:0003056,4.94e-10,49;UBERON:0002780,7.43e-10,39;UBERON:0001890,7.43e-10,39;UBERON:0006240,7.43e-10,39;UBERON:0010314,9.93e-09,92;UBERON:0002021,3.36e-08,10;UBERON:0000411,3.36e-08,10;UBERON:0001950,3.36e-08,10;UBERON:0000956,8.78e-08,21;UBERON:0001869,8.78e-08,21;UBERON:0000203,8.78e-08,21;UBERON:0000991,8.90e-08,18;UBERON:0005564,8.90e-08,18;UBERON:0004176,2.25e-07,17;UBERON:0009196,2.25e-07,17;UBERON:0009117,2.25e-07,17;UBERON:0002619,3.18e-07,17;UBERON:0000473,8.16e-07,14 | |||
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| |||
|short_description=p1@Arhgap20 | |||
}} | |||
Revision as of 18:12, 14 September 2013
| Short description: | p1@Arhgap20 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Arhgap20_5end |
| Coexpression cluster: | MCL_coexpression_mm9:817 |
| Association with transcript: | 0bp_to_ENSMUST00000065496, ENSMUST00000124907, ENSMUST00000146509, NM_175535, uc009pli.1, uc009plj.1_5end |
| EntrezGene: | Arhgap20 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 7.99e-07 | 23 |
| neuroblast (sensu Vertebrata) | 7.99e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
