FFCP PHASE1:Mm9::chr9:50913937..50913956,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=815|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:50913937..50913956,-|id=chr9:50913937..50913956,-|ontology_enrichment_celltype=CL:0002453!3.08e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.81e-08,8;CL:0000192,6.77e-07,3;CL:0000359,6.77e-07,3;CL:0002539,6.77e-07,3;CL:0000514,6.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.46e-10!17;UBERON:0005181!1.46e-10!17;UBERON:0002224!1.46e-10!17;UBERON:0000915!1.46e-10!17;UBERON:0008947!1.46e-10!17;UBERON:0003258!1.46e-10!17;UBERON:0002048!2.75e-09!14;UBERON:0000117!2.75e-09!14;UBERON:0000171!2.75e-09!14;UBERON:0000170!2.75e-09!14;UBERON:0005597!2.75e-09!14;UBERON:0000118!2.75e-09!14;UBERON:0005153!6.53e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.52e-16,14;UBERON:0000117,6.52e-16,14;UBERON:0000171,6.52e-16,14;UBERON:0000170,6.52e-16,14;UBERON:0005597,6.52e-16,14;UBERON:0000118,6.52e-16,14;UBERON:0005178,8.11e-15,17;UBERON:0005181,8.11e-15,17;UBERON:0002224,8.11e-15,17;UBERON:0000915,8.11e-15,17;UBERON:0008947,8.11e-15,17;UBERON:0003258,8.11e-15,17;UBERON:0005153,1.23e-12,17;UBERON:0005157,3.43e-12,20;UBERON:0001135,6.77e-07,3;UBERON:0004237,6.77e-07,3;UBERON:0004695,6.77e-07,3;UBERON:0002111,6.77e-07,3;UBERON:0004178,6.77e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,5.27160042341476,1.28482726513177,2.34717403304412,0.218025156380447,0.878744730937887,2.3331587888914,1.95980990275508,1.43752564364972,0,0,0,0.771778308107841,0,2.57836046138721,0,0,0,2.37191172448392,3.55717918444456,0,0,0,3.29560121570245,4.2264013585371,0,0,0,0,0,0.244981598429908,0,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,2.55645483867087,3.11743205523443,1.7666978725517,0,17.9657068380045,2.54805239706646,0,1.08245520505607,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0,0,0.251308704225729,0,0,1.0389402227978,0.811206315338788,0,0.995255764880744,1.0108910337347,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,8.49864674766381,0,0,0.339490171550376,1.17345124144251,3.35012514883632,5.95109102215034,2.92700471786698,2.67979744980525,2.21464689648775,1.91345722388985,2.29408640602033,4.66249451037918,8.67894351489069,0,0,0,0,1.28440471990234,0,3.60656879828686,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0,0.809621403349789,1.16902343164525,0.790575555893047,0,2.6968616189571,0,0,6.76377504187395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.288635524920988,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.936415074698824,0.960377286073039,0.861532034334199,1.42888107384922,0.579421629724277,0.77163688185482,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,1.90748951957857,0.726732083161643,1.31753132581463,0.761531471025089,0.548783918618318,0.789209134313529,1.22223702461276,1.12228454331548,0.711810108745045,0.492522411877817,0,0.619747364743864,0.578719832943424,1.74867404556562,0,0.859484216193193,0,0,0|short_description=p@chr9:50913937..50913956,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=815 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:50913937..50913956,- | |||
|id=chr9:50913937..50913956,- | |||
|ontology_enrichment_celltype=CL:0002453!3.08e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.81e-08,8;CL:0000192,6.77e-07,3;CL:0000359,6.77e-07,3;CL:0002539,6.77e-07,3;CL:0000514,6.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.46e-10!17;UBERON:0005181!1.46e-10!17;UBERON:0002224!1.46e-10!17;UBERON:0000915!1.46e-10!17;UBERON:0008947!1.46e-10!17;UBERON:0003258!1.46e-10!17;UBERON:0002048!2.75e-09!14;UBERON:0000117!2.75e-09!14;UBERON:0000171!2.75e-09!14;UBERON:0000170!2.75e-09!14;UBERON:0005597!2.75e-09!14;UBERON:0000118!2.75e-09!14;UBERON:0005153!6.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.52e-16,14;UBERON:0000117,6.52e-16,14;UBERON:0000171,6.52e-16,14;UBERON:0000170,6.52e-16,14;UBERON:0005597,6.52e-16,14;UBERON:0000118,6.52e-16,14;UBERON:0005178,8.11e-15,17;UBERON:0005181,8.11e-15,17;UBERON:0002224,8.11e-15,17;UBERON:0000915,8.11e-15,17;UBERON:0008947,8.11e-15,17;UBERON:0003258,8.11e-15,17;UBERON:0005153,1.23e-12,17;UBERON:0005157,3.43e-12,20;UBERON:0001135,6.77e-07,3;UBERON:0004237,6.77e-07,3;UBERON:0004695,6.77e-07,3;UBERON:0002111,6.77e-07,3;UBERON:0004178,6.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,5.27160042341476,1.28482726513177,2.34717403304412,0.218025156380447,0.878744730937887,2.3331587888914,1.95980990275508,1.43752564364972,0,0,0,0.771778308107841,0,2.57836046138721,0,0,0,2.37191172448392,3.55717918444456,0,0,0,3.29560121570245,4.2264013585371,0,0,0,0,0,0.244981598429908,0,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,2.55645483867087,3.11743205523443,1.7666978725517,0,17.9657068380045,2.54805239706646,0,1.08245520505607,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0,0,0.251308704225729,0,0,1.0389402227978,0.811206315338788,0,0.995255764880744,1.0108910337347,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,8.49864674766381,0,0,0.339490171550376,1.17345124144251,3.35012514883632,5.95109102215034,2.92700471786698,2.67979744980525,2.21464689648775,1.91345722388985,2.29408640602033,4.66249451037918,8.67894351489069,0,0,0,0,1.28440471990234,0,3.60656879828686,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0,0.809621403349789,1.16902343164525,0.790575555893047,0,2.6968616189571,0,0,6.76377504187395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.288635524920988,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.936415074698824,0.960377286073039,0.861532034334199,1.42888107384922,0.579421629724277,0.77163688185482,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,1.90748951957857,0.726732083161643,1.31753132581463,0.761531471025089,0.548783918618318,0.789209134313529,1.22223702461276,1.12228454331548,0.711810108745045,0.492522411877817,0,0.619747364743864,0.578719832943424,1.74867404556562,0,0.859484216193193,0,0,0 | |||
|short_description=p@chr9:50913937..50913956,- | |||
}} |
Revision as of 18:11, 14 September 2013
Short description: | p@chr9:50913937..50913956, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:50913937..50913956, - |
Coexpression cluster: | MCL_coexpression_mm9:815 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.81e-08 | 8 |
smooth muscle cell | 6.77e-07 | 3 |
vascular associated smooth muscle cell | 6.77e-07 | 3 |
aortic smooth muscle cell | 6.77e-07 | 3 |
smooth muscle myoblast | 6.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 6.52e-16 | 14 |
respiratory tube | 6.52e-16 | 14 |
respiration organ | 6.52e-16 | 14 |
pair of lungs | 6.52e-16 | 14 |
lung primordium | 6.52e-16 | 14 |
lung bud | 6.52e-16 | 14 |
thoracic cavity element | 8.11e-15 | 17 |
thoracic segment organ | 8.11e-15 | 17 |
thoracic cavity | 8.11e-15 | 17 |
thoracic segment of trunk | 8.11e-15 | 17 |
respiratory primordium | 8.11e-15 | 17 |
endoderm of foregut | 8.11e-15 | 17 |
epithelial bud | 1.23e-12 | 17 |
epithelial fold | 3.43e-12 | 20 |
smooth muscle tissue | 6.77e-07 | 3 |
blood vessel smooth muscle | 6.77e-07 | 3 |
arterial system smooth muscle | 6.77e-07 | 3 |
artery smooth muscle tissue | 6.77e-07 | 3 |
aorta smooth muscle tissue | 6.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.