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FFCP PHASE1:Mm9::chr9:45793448..45793498,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18475|HGNC=|UniProt=Q61206|association_with_transcript=-494bp_to_ENSMUST00000172450,NM_008775,uc009pgx.1_5end|description=CAGE_peak_3_at_Pafah1b2_5end|id=chr9:45793448..45793498,-|ontology_enrichment_celltype=CL:0000393!2.13e-14!39;CL:0000211!2.13e-14!39;CL:0000055!1.01e-13!50;CL:0000221!2.22e-11!44;CL:0000133!2.22e-11!44;CL:0000540!2.23e-11!33;CL:0000047!2.23e-11!33;CL:0000031!2.23e-11!33;CL:0000404!2.23e-11!33;CL:0002319!2.47e-11!43;CL:0000117!3.33e-08!23;CL:0000337!3.33e-08!23;CL:0002321!5.96e-07!70;CL:0000220!5.96e-07!70|ontology_enrichment_celltype_v019_2=CL:0000393,1.85e-14,39;CL:0000211,1.85e-14,39;CL:0000221,2.00e-11,44;CL:0000133,2.00e-11,44;CL:0000540,2.01e-11,33;CL:0000047,2.01e-11,33;CL:0000031,2.01e-11,33;CL:0000404,2.01e-11,33;CL:0002319,2.22e-11,43;CL:0000117,3.09e-08,23;CL:0000337,3.09e-08,23;CL:0002321,4.60e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.43e-21!102;UBERON:0000924!4.43e-21!102;UBERON:0006601!4.43e-21!102;UBERON:0000073!7.59e-20!75;UBERON:0001016!7.59e-20!75;UBERON:0001017!5.01e-19!73;UBERON:0005743!5.01e-19!73;UBERON:0002346!1.57e-18!71;UBERON:0003075!1.57e-18!71;UBERON:0007284!1.57e-18!71;UBERON:0000033!3.31e-14!63;UBERON:0000955!3.02e-13!50;UBERON:0006238!3.02e-13!50;UBERON:0002616!3.18e-13!49;UBERON:0001049!9.19e-13!52;UBERON:0005068!9.19e-13!52;UBERON:0006241!9.19e-13!52;UBERON:0007135!9.19e-13!52;UBERON:0003056!2.57e-12!49;UBERON:0003080!3.12e-10!40;UBERON:0002780!1.19e-09!39;UBERON:0001890!1.19e-09!39;UBERON:0006240!1.19e-09!39;UBERON:0000025!3.93e-09!114;UBERON:0004111!3.16e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.21e-20,75;UBERON:0001017,4.14e-19,73;UBERON:0004121,2.42e-18,95;UBERON:0000924,2.42e-18,95;UBERON:0006601,2.42e-18,95;UBERON:0010314,4.91e-18,92;UBERON:0002346,3.27e-16,64;UBERON:0003075,3.27e-16,64;UBERON:0007284,3.27e-16,64;UBERON:0000073,6.72e-14,54;UBERON:0010371,9.29e-14,73;UBERON:0001049,8.13e-13,52;UBERON:0005068,8.13e-13,52;UBERON:0006241,8.13e-13,52;UBERON:0007135,8.13e-13,52;UBERON:0003056,2.40e-12,49;UBERON:0000955,1.29e-11,47;UBERON:0006238,1.29e-11,47;UBERON:0002616,1.37e-11,46;UBERON:0003080,2.83e-10,40;UBERON:0002780,1.09e-09,39;UBERON:0001890,1.09e-09,39;UBERON:0006240,1.09e-09,39;UBERON:0000025,4.73e-09,114;UBERON:0004111,3.76e-08,122|phase1_expression=2.7225304007815,0,0.909998478779072,0.30246421130683,0.500895729946347,1.00727563147134,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0.68487187290202,0.159544317990673,0.513602189793617,0.437102012094987,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,0.274228867211478,0,3.31668831589172,0.695036658406197,1.82839852397255,0.95995453676044,0.91763712426868,0,0,1.07735616342945,1.33016393619462,1.51218077855958,0.886922042621219,0,0,0,2.02196133825892,1.66234645358492,1.63335485009895,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0.485510353031154,7.67970589651021,6.58950052926845,4.58866880404204,2.34717403304412,1.96222640742402,4.17403747195497,6.80504646759992,3.63964696225943,2.87505128729943,0.838913030288682,0,0,11.3194151855817,5.73066879877513,5.67239301505187,4.85559506063035,8.46385566835253,5.07065122804943,1.69422266034566,1.77858959222228,0.449949858640699,0.988866362566974,2.1314403448383,2.09720077362883,2.30530983192933,4.56234294157302,2.02508907497536,6.52007380189284,1.71390590642282,3.97563373712904,4.40966877173835,3.73797336971122,7.35375029288017,13.2139057199266,6.12899222808901,8.29475279583715,5.14356522147756,6.77008562657831,7.29278718779464,4.4669279840221,4.50210088025344,4.43114918552749,5.30331453852602,2.98980529678116,7.26957838718672,4.01348824665875,6.65029728939713,4.05810284182349,1.72084775396277,2.03991400112325,1.61910957491345,1.29955283489534,0.896053774194671,1.82577746171277,7.32850387085648,4.1565760736459,4.24007489412408,3.23939865486365,7.69958864485907,2.54805239706646,0,3.46385665617943,3.29367825117628,1.51657333504435,1.94112595522402,3.6251303710604,6.97678053604676,4.3371331691534,6.69824052286711,3.22861696158482,5.87818298155228,4.11560474974967,3.26733137457156,1.48316980640624,2.74738778147832,0,2.58826959915855,1.32504911076236,1.45462575940567,1.86391761218122,4.9772735491963,6.0739544975902,0.255457055208591,3.71426885968353,2.99951365496704,2.54140454146129,11.0845073159569,2.28750301409313,7.91622418311046,4.17178368461463,2.81287003063364,9.97382613885888,6.48965052271031,3.86989582631202,2.73695335342205,4.0435641349388,0.631325567659422,5.72529949035896,5.51765050640335,4.68161537493908,4.21973489940002,4.55844544313897,6.02134485338794,5.71580519814346,4.13925393182425,2.80238390812695,2.83659120251729,4.04687585577082,4.16471891612392,4.17070873838397,4.179025998266,5.76189981942242,2.18937693500343,2.80885274925294,1.80143534980301,3.12579849335152,2.48550927042602,4.22146907965973,3.42117916775928,2.3674473558521,2.75469924446365,2.62254091908543,3.0229412817553,3.4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|EntrezGene=18475
|HGNC=
|UniProt=Q61206
|association_with_transcript=-494bp_to_ENSMUST00000172450,NM_008775,uc009pgx.1_5end
|description=CAGE_peak_3_at_Pafah1b2_5end
|id=chr9:45793448..45793498,-
|ontology_enrichment_celltype=CL:0000393!2.13e-14!39;CL:0000211!2.13e-14!39;CL:0000055!1.01e-13!50;CL:0000221!2.22e-11!44;CL:0000133!2.22e-11!44;CL:0000540!2.23e-11!33;CL:0000047!2.23e-11!33;CL:0000031!2.23e-11!33;CL:0000404!2.23e-11!33;CL:0002319!2.47e-11!43;CL:0000117!3.33e-08!23;CL:0000337!3.33e-08!23;CL:0002321!5.96e-07!70;CL:0000220!5.96e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000393,1.85e-14,39;CL:0000211,1.85e-14,39;CL:0000221,2.00e-11,44;CL:0000133,2.00e-11,44;CL:0000540,2.01e-11,33;CL:0000047,2.01e-11,33;CL:0000031,2.01e-11,33;CL:0000404,2.01e-11,33;CL:0002319,2.22e-11,43;CL:0000117,3.09e-08,23;CL:0000337,3.09e-08,23;CL:0002321,4.60e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.43e-21!102;UBERON:0000924!4.43e-21!102;UBERON:0006601!4.43e-21!102;UBERON:0000073!7.59e-20!75;UBERON:0001016!7.59e-20!75;UBERON:0001017!5.01e-19!73;UBERON:0005743!5.01e-19!73;UBERON:0002346!1.57e-18!71;UBERON:0003075!1.57e-18!71;UBERON:0007284!1.57e-18!71;UBERON:0000033!3.31e-14!63;UBERON:0000955!3.02e-13!50;UBERON:0006238!3.02e-13!50;UBERON:0002616!3.18e-13!49;UBERON:0001049!9.19e-13!52;UBERON:0005068!9.19e-13!52;UBERON:0006241!9.19e-13!52;UBERON:0007135!9.19e-13!52;UBERON:0003056!2.57e-12!49;UBERON:0003080!3.12e-10!40;UBERON:0002780!1.19e-09!39;UBERON:0001890!1.19e-09!39;UBERON:0006240!1.19e-09!39;UBERON:0000025!3.93e-09!114;UBERON:0004111!3.16e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.21e-20,75;UBERON:0001017,4.14e-19,73;UBERON:0004121,2.42e-18,95;UBERON:0000924,2.42e-18,95;UBERON:0006601,2.42e-18,95;UBERON:0010314,4.91e-18,92;UBERON:0002346,3.27e-16,64;UBERON:0003075,3.27e-16,64;UBERON:0007284,3.27e-16,64;UBERON:0000073,6.72e-14,54;UBERON:0010371,9.29e-14,73;UBERON:0001049,8.13e-13,52;UBERON:0005068,8.13e-13,52;UBERON:0006241,8.13e-13,52;UBERON:0007135,8.13e-13,52;UBERON:0003056,2.40e-12,49;UBERON:0000955,1.29e-11,47;UBERON:0006238,1.29e-11,47;UBERON:0002616,1.37e-11,46;UBERON:0003080,2.83e-10,40;UBERON:0002780,1.09e-09,39;UBERON:0001890,1.09e-09,39;UBERON:0006240,1.09e-09,39;UBERON:0000025,4.73e-09,114;UBERON:0004111,3.76e-08,122
|phase1_expression=2.7225304007815,0,0.909998478779072,0.30246421130683,0.500895729946347,1.00727563147134,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0.68487187290202,0.159544317990673,0.513602189793617,0.437102012094987,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,0.274228867211478,0,3.31668831589172,0.695036658406197,1.82839852397255,0.95995453676044,0.91763712426868,0,0,1.07735616342945,1.33016393619462,1.51218077855958,0.886922042621219,0,0,0,2.02196133825892,1.66234645358492,1.63335485009895,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0.485510353031154,7.67970589651021,6.58950052926845,4.58866880404204,2.34717403304412,1.96222640742402,4.17403747195497,6.80504646759992,3.63964696225943,2.87505128729943,0.838913030288682,0,0,11.3194151855817,5.73066879877513,5.67239301505187,4.85559506063035,8.46385566835253,5.07065122804943,1.69422266034566,1.77858959222228,0.449949858640699,0.988866362566974,2.1314403448383,2.09720077362883,2.30530983192933,4.56234294157302,2.02508907497536,6.52007380189284,1.71390590642282,3.97563373712904,4.40966877173835,3.73797336971122,7.35375029288017,13.2139057199266,6.12899222808901,8.29475279583715,5.14356522147756,6.77008562657831,7.29278718779464,4.4669279840221,4.50210088025344,4.43114918552749,5.30331453852602,2.98980529678116,7.26957838718672,4.01348824665875,6.65029728939713,4.05810284182349,1.72084775396277,2.03991400112325,1.61910957491345,1.29955283489534,0.896053774194671,1.82577746171277,7.32850387085648,4.1565760736459,4.24007489412408,3.23939865486365,7.69958864485907,2.54805239706646,0,3.46385665617943,3.29367825117628,1.51657333504435,1.94112595522402,3.6251303710604,6.97678053604676,4.3371331691534,6.69824052286711,3.22861696158482,5.87818298155228,4.11560474974967,3.26733137457156,1.48316980640624,2.74738778147832,0,2.58826959915855,1.32504911076236,1.45462575940567,1.86391761218122,4.9772735491963,6.0739544975902,0.255457055208591,3.71426885968353,2.99951365496704,2.54140454146129,11.0845073159569,2.28750301409313,7.91622418311046,4.17178368461463,2.81287003063364,9.97382613885888,6.48965052271031,3.86989582631202,2.73695335342205,4.0435641349388,0.631325567659422,5.72529949035896,5.51765050640335,4.68161537493908,4.21973489940002,4.55844544313897,6.02134485338794,5.71580519814346,4.13925393182425,2.80238390812695,2.83659120251729,4.04687585577082,4.16471891612392,4.17070873838397,4.179025998266,5.76189981942242,2.18937693500343,2.80885274925294,1.80143534980301,3.12579849335152,2.48550927042602,4.22146907965973,3.42117916775928,2.3674473558521,2.75469924446365,2.62254091908543,3.0229412817553,3.48755421819505,1.75148013550754,1.31647879930784,4.43252153013557,2.43206428637567,2.63159977365598,1.09775057645525,3.08674763148855,3.57492912559016,9.67303356365274,0.660837565967596,1.05780226665418,2.98603550749328,2.78684006232526,2.31961430379768,3.22693639397348,3.7804267453628,1.33157938278791,1.89811624617805,2.79988223030818,2.76468729680296,1.79060824837036,1.36474860983384,0,0.432276099749388,0.995706366271836,3.41402221715547,2.39921876480431,3.38123207019241,2.64746726198909,2.52138233317913,1.8936671370386,2.02356918797623,2.06654207171443,3.767969468193,3.82531208157582,2.37162101669719,1.50160595144485,0.786235980452812,1.12431056192427,0.811440485554012,2.41177159752417,1.2731292589071,0.863088412352432,2.2698931748505,1.92192989231657,0,1.11642284300551,1.5601883655728,2.02063102357689,1.97337154874103,2.8946611281802,2.03228509183265,1.89491411770485,4.56301934037672,3.90413697282933,3.75504397261603,3.35012514883632,3.33261097240419,1.56106918286239,3.4679731703362,6.42247599981447,3.6674596791222,4.91589944147214,4.31712454664739,3.7608755231193,1.50791283939272,1.08781136763742,0.983528546038072,1.65562047782839,10.5963389391943,11.6039569726281,6.55739781506702,2.27223834483936,4.10160685241134,6.63745865304285,4.95473814785438,5.01834475700359,6.68396022247182,5.09537755419898,3.23848561339915,5.84511715822624,7.51046778098395,3.21321316421807,2.2710413633323,3.02711526234334,3.58351310577867,3.29940245945071,1.32745138339963,3.15614827001476,2.11626489875326,2.82907619633847,2.06711325016541,2.76691633149535,3.35956781118687,2.54473610634254,3.56497378384721,2.52829406348653,1.05418608574999,2.06271086496374,6.80879211507576,5.221771726908,5.82114077022395,6.64444808597936,7.62563004661776,8.02659679209317,8.39200005070817,4.56697423671899,0.938686832254841,2.33015277950202,2.64634077665954,0.98931751764888,3.87514624070173,3.07595917133595,2.50681922406587,1.96969079694074,2.33184669303881,11.3109434226411,1.53783792718067,2.27025554759545,0.740778109478847,1.50694765603753,0.410082683163076,0.915112692826091,4.24946074984638,2.93898049879682,3.04039942369732,2.86401185404534,4.58687190692646,4.87966721104437,2.70013352054503,3.3454127362315,4.80397640241591,2.83215127408124,2.64491058321075,1.04702376793612,1.03691978633434,1.24267862617385,10.1464728963154,1.34564891439581,1.98550188548517,2.52786544847262,2.0665571756437,1.68956125490778,3.0512882047896,1.5624526181274,1.57289016638566,2.17425708743405,2.01621004380506,0.632022241256357,2.43270258348197,2.46506297195585,1.68897069871134,1.9692936523423,1.78813219303138,0.841368146639782,0.295379054349154,0.504832249740738,1.06689529317,0.302478555410522,0.194915761479505,0.577271049841977,0.935015217452552,1.58711268530648,0.665957860122194,0.807424709485281,1.51096154727671,2.51146472241848,3.56596703357246,1.46521299413812,1.07184189539533,2.50786052017682,2.25900737046827,3.22227665555024,1.71868654031819,2.57779773515531,2.05524755931193,1.5107877947794,4.05013500139084,2.2516060161211,5.89085131679466,3.10656187051092,3.00983307994112,3.19219898720825,5.12200817262403,3.40349403895612,3.14419743941973,1.2869045591501,2.44471400581777,4.12070114477788,3.20919209591815,2.77966932940177,4.30914809813408,2.64076877940507,2.52832070168682,3.00918216302886,2.23998328926892,4.76293691283074,2.0859178670074,2.70072908649187,3.70877310722976,3.23837624295674,2.05721551431249,2.12970967391205,2.62279808942053,2.32554266611726,2.07040636913727,2.96151127620868,2.19513567447327,2.36762740294059,1.62964936615034,3.36685362994643,2.60997039873183,1.87158516513571,2.45538625901814,1.54936841185966,2.50778594275484,5.24602213669686,4.21076895201735,2.57845264857958,3.44318997723918,3.30887128679273,3.47801753430632
|short_description=p3@Pafah1b2
}}

Revision as of 18:02, 14 September 2013

Short description:p3@Pafah1b2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pafah1b2_5end
Coexpression cluster:NA
Association with transcript: -494bp_to_ENSMUST00000172450, NM_008775, uc009pgx.1_5end
EntrezGene:Pafah1b2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pafah1b2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A411.08
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A311.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C75.82
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F58.39
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C911.31
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.48





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.85e-1439
electrically active cell1.85e-1439
ectodermal cell2.00e-1144
neurectodermal cell2.00e-1144
neuron2.01e-1133
neuronal stem cell2.01e-1133
neuroblast2.01e-1133
electrically signaling cell2.01e-1133
neural cell2.22e-1143
CNS neuron (sensu Vertebrata)3.09e-0823
neuroblast (sensu Vertebrata)3.09e-0823
embryonic cell4.60e-0770







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