FFCP PHASE1:Mm9::chr9:4309719..4309748,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69149|HGNC=|MCL_coexpression_id=709|UniProt=Q8BHI4|association_with_transcript=0bp_to_ENSMUST00000049648,NM_001164574,uc009obj.2,uc009obk.2,uc009obl.2_5end|description=CAGE_peak_2_at_Kbtbd3_5end|id=chr9:4309719..4309748,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.86e-11!63;UBERON:0002346!4.46e-11!71;UBERON:0003075!4.46e-11!71;UBERON:0007284!4.46e-11!71;UBERON:0004121!4.55e-09!102;UBERON:0000924!4.55e-09!102;UBERON:0006601!4.55e-09!102;UBERON:0001017!5.50e-09!73;UBERON:0005743!5.50e-09!73;UBERON:0000073!6.70e-09!75;UBERON:0001016!6.70e-09!75;UBERON:0001049!1.34e-08!52;UBERON:0005068!1.34e-08!52;UBERON:0006241!1.34e-08!52;UBERON:0007135!1.34e-08!52;UBERON:0000955!7.15e-08!50;UBERON:0006238!7.15e-08!50;UBERON:0003056!7.90e-08!49;UBERON:0002616!1.59e-07!49;UBERON:0007811!2.81e-07!86;UBERON:0000153!3.84e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.06e-14,64;UBERON:0003075,9.06e-14,64;UBERON:0007284,9.06e-14,64;UBERON:0004121,1.72e-12,95;UBERON:0000924,1.72e-12,95;UBERON:0006601,1.72e-12,95;UBERON:0010371,8.31e-12,73;UBERON:0001016,5.89e-11,75;UBERON:0001017,6.95e-11,73;UBERON:0000073,1.51e-10,54;UBERON:0010314,4.09e-10,92;UBERON:0001049,2.12e-09,52;UBERON:0005068,2.12e-09,52;UBERON:0006241,2.12e-09,52;UBERON:0007135,2.12e-09,52;UBERON:0003056,2.85e-08,49;UBERON:0000955,7.95e-07,47;UBERON:0006238,7.95e-07,47;UBERON:0003076,8.90e-07,12;UBERON:0003057,8.90e-07,12|phase1_expression=1.44133962394315,0,0.909998478779072,0,0,0.503637815735669,1.16806320297763,0.516493293766305,0.140788722151667,0.234064526321993,0.513653904676515,0.558405112967355,1.02720437958723,0.34968160967599,0,0.404950534779652,2.09868563438444,0.473193248037357,1.23402990245165,0.84877930359606,2.12608225377674,0.297872853602656,0.783599367416806,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0,1.10865255327652,0,0,0,0.866554859253824,0.664938581433969,0.816677425049476,0.837063261473815,0,1.0470474879476,2.35292595212406,0.683045484958446,2.91306211818692,0,0.405507724878058,0.183546752161682,0,0.872100625521786,0.878744730937887,0.388859798148567,0.419959264876088,0,0.838913030288682,0,0.672187598284928,0.514518872071894,0.573066879877513,0.515672092277442,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.135005938331691,0,1.99955689082663,1.32521124570968,0.367472397644862,0.766763768145891,0.919218786610021,3.30347642998166,2.55374676170375,4.30098293117482,0.923204014111357,0.640413505216868,1.04182674111352,3.90856198601933,2.8138130501584,1.98637722109853,4.12480019663135,3.98640706237488,2.05039390407831,0.37863096666592,1.73814588245607,0.289864488701678,0.860423876981386,0,0.539703191637817,0,0,1.54488862144927,0.511290967734173,0.519572009205738,0,2.81686839553361,0,0,0,0.865964164044856,1.01343946190039,0,0.91347103775248,0.776813650941515,0.742210695324124,0.520455980298408,0,0.691846491768175,0.904335843315735,0.940709657085638,1.0053327306374,0.494389935468748,1.15679485535929,0,0.647067399789637,0.662524555381181,0.969750506270444,0,3.80615036115011,2.93225389538837,0.255457055208591,0.718890747035522,0,1.01656181658452,4.34392854273986,1.83000241127451,0.879580464790051,4.17178368461463,3.06858548796397,3.74018480207208,4.05603157669394,0.916554274652847,0.995255764880744,2.52722758433675,0.631325567659422,1.56144531555244,2.98872735763515,1.80062129805349,2.10986744970001,2.04109497453984,2.69038812598185,2.52994656311268,3.88055056108524,1.94011193639558,1.51284864134255,0.351902248327898,0.876782929710299,2.22437799380478,0.348252166522167,0.411564272815887,0.796137067273973,0,1.02939162845886,0.852490498186778,0.414251545071004,0.938104239924385,0.900310307305074,0.946978942340841,0.196764231747404,1.69693824176116,0.930135779001631,0.536546802799238,1.05088808130453,0.987359099480883,0.656669856316381,1.37816976227955,1.75439984910399,2.63460138349261,1.20785776884335,2.3131894342054,1.3377599609307,0,0.528901133327089,1.2797295032114,1.62565670302307,0.77320476793256,0.605050573870028,0.889512175379481,0.760902504450237,0,0.164698954724011,0.502670417600539,1.59165177632921,0.779856348476481,0,0.864552199498777,0.796565093017469,0.948339504765408,1.02823661348756,1.1270773567308,0.814605311381257,1.35766741017338,0.561086559122548,1.13825766823663,0.885660887877613,0.784993639206874,0.863780147452604,0.296452627087149,0.667380422864376,0.196558995113203,0.224862112384854,0.608580364165509,0,0.763877555344259,0,0.648540907100142,0.549122826376163,0,0.744281895337007,0.936113019343682,1.01031551178845,0.179397413521912,0.482443521363367,0.923765950833023,0.757965647081939,1.46668478797823,0.678980343100753,1.40814148973101,1.34005005953453,0.714130922658041,0.390267295715598,1.7339865851681,1.55025282754142,1.11618338060241,0.8193165735786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| ||
|EntrezGene=69149 | |||
|HGNC= | |||
|MCL_coexpression_id=709 | |||
|UniProt=Q8BHI4 | |||
|association_with_transcript=0bp_to_ENSMUST00000049648,NM_001164574,uc009obj.2,uc009obk.2,uc009obl.2_5end | |||
|description=CAGE_peak_2_at_Kbtbd3_5end | |||
|id=chr9:4309719..4309748,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.86e-11!63;UBERON:0002346!4.46e-11!71;UBERON:0003075!4.46e-11!71;UBERON:0007284!4.46e-11!71;UBERON:0004121!4.55e-09!102;UBERON:0000924!4.55e-09!102;UBERON:0006601!4.55e-09!102;UBERON:0001017!5.50e-09!73;UBERON:0005743!5.50e-09!73;UBERON:0000073!6.70e-09!75;UBERON:0001016!6.70e-09!75;UBERON:0001049!1.34e-08!52;UBERON:0005068!1.34e-08!52;UBERON:0006241!1.34e-08!52;UBERON:0007135!1.34e-08!52;UBERON:0000955!7.15e-08!50;UBERON:0006238!7.15e-08!50;UBERON:0003056!7.90e-08!49;UBERON:0002616!1.59e-07!49;UBERON:0007811!2.81e-07!86;UBERON:0000153!3.84e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.06e-14,64;UBERON:0003075,9.06e-14,64;UBERON:0007284,9.06e-14,64;UBERON:0004121,1.72e-12,95;UBERON:0000924,1.72e-12,95;UBERON:0006601,1.72e-12,95;UBERON:0010371,8.31e-12,73;UBERON:0001016,5.89e-11,75;UBERON:0001017,6.95e-11,73;UBERON:0000073,1.51e-10,54;UBERON:0010314,4.09e-10,92;UBERON:0001049,2.12e-09,52;UBERON:0005068,2.12e-09,52;UBERON:0006241,2.12e-09,52;UBERON:0007135,2.12e-09,52;UBERON:0003056,2.85e-08,49;UBERON:0000955,7.95e-07,47;UBERON:0006238,7.95e-07,47;UBERON:0003076,8.90e-07,12;UBERON:0003057,8.90e-07,12 | |||
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| |||
|short_description=p2@Kbtbd3 | |||
}} |
Revision as of 17:52, 14 September 2013
Short description: | p2@Kbtbd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kbtbd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:709 |
Association with transcript: | 0bp_to_ENSMUST00000049648, NM_001164574, uc009obj.2, uc009obk.2, uc009obl.2_5end |
EntrezGene: | Kbtbd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.06e-14 | 64 |
neural plate | 9.06e-14 | 64 |
presumptive neural plate | 9.06e-14 | 64 |
ectoderm-derived structure | 1.72e-12 | 95 |
ectoderm | 1.72e-12 | 95 |
presumptive ectoderm | 1.72e-12 | 95 |
ecto-epithelium | 8.31e-12 | 73 |
nervous system | 5.89e-11 | 75 |
central nervous system | 6.95e-11 | 73 |
regional part of nervous system | 1.51e-10 | 54 |
structure with developmental contribution from neural crest | 4.09e-10 | 92 |
neural tube | 2.12e-09 | 52 |
neural rod | 2.12e-09 | 52 |
future spinal cord | 2.12e-09 | 52 |
neural keel | 2.12e-09 | 52 |
pre-chordal neural plate | 2.85e-08 | 49 |
brain | 7.95e-07 | 47 |
future brain | 7.95e-07 | 47 |
posterior neural tube | 8.90e-07 | 12 |
chordal neural plate | 8.90e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.