FFCP PHASE1:Mm9::chr9:20550791..20550812,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3015|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:20550791..20550812,-|id=chr9:20550791..20550812,-|ontology_enrichment_celltype=CL:0000221!8.51e-21!44;CL:0000133!8.51e-21!44;CL:0002319!2.53e-20!43;CL:0000117!9.61e-16!23;CL:0000337!9.61e-16!23;CL:0000540!2.35e-15!33;CL:0000047!2.35e-15!33;CL:0000031!2.35e-15!33;CL:0000404!2.35e-15!33;CL:0000055!1.24e-14!50;CL:0000393!9.28e-11!39;CL:0000211!9.28e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.68e-23,44;CL:0000133,1.68e-23,44;CL:0002319,7.40e-23,43;CL:0000117,2.70e-21,23;CL:0000337,2.70e-21,23;CL:0000540,5.03e-17,33;CL:0000047,5.03e-17,33;CL:0000031,5.03e-17,33;CL:0000404,5.03e-17,33;CL:0000393,8.91e-13,39;CL:0000211,8.91e-13,39;CL:0002321,3.29e-10,70;CL:0002453,9.97e-08,8;CL:0002609,6.01e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.15e-34!75;UBERON:0001016!3.15e-34!75;UBERON:0001017!5.33e-34!73;UBERON:0005743!5.33e-34!73;UBERON:0004121!3.39e-32!102;UBERON:0000924!3.39e-32!102;UBERON:0006601!3.39e-32!102;UBERON:0002346!8.11e-27!71;UBERON:0003075!8.11e-27!71;UBERON:0007284!8.11e-27!71;UBERON:0001049!1.15e-26!52;UBERON:0005068!1.15e-26!52;UBERON:0006241!1.15e-26!52;UBERON:0007135!1.15e-26!52;UBERON:0000033!1.68e-24!63;UBERON:0000955!5.53e-24!50;UBERON:0006238!5.53e-24!50;UBERON:0002616!6.51e-24!49;UBERON:0002020!1.25e-20!34;UBERON:0003056!1.42e-20!49;UBERON:0003080!3.66e-20!40;UBERON:0002780!1.55e-19!39;UBERON:0001890!1.55e-19!39;UBERON:0006240!1.55e-19!39;UBERON:0002791!3.21e-17!29;UBERON:0003528!3.21e-17!29;UBERON:0001893!3.21e-17!29;UBERON:0000956!4.44e-12!21;UBERON:0001869!4.44e-12!21;UBERON:0000203!4.44e-12!21;UBERON:0007811!4.11e-11!86;UBERON:0000153!2.82e-10!94;UBERON:0002619!1.18e-09!17;UBERON:0003076!5.20e-07!12;UBERON:0003057!5.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-37,73;UBERON:0001016,6.03e-37,75;UBERON:0000073,1.68e-33,54;UBERON:0004121,3.52e-33,95;UBERON:0000924,3.52e-33,95;UBERON:0006601,3.52e-33,95;UBERON:0002346,9.68e-33,64;UBERON:0003075,9.68e-33,64;UBERON:0007284,9.68e-33,64;UBERON:0001049,2.68e-32,52;UBERON:0005068,2.68e-32,52;UBERON:0006241,2.68e-32,52;UBERON:0007135,2.68e-32,52;UBERON:0010371,2.04e-28,73;UBERON:0002020,4.13e-28,34;UBERON:0002616,9.57e-27,46;UBERON:0000955,7.92e-26,47;UBERON:0006238,7.92e-26,47;UBERON:0003056,7.12e-24,49;UBERON:0003080,2.07e-23,40;UBERON:0003528,2.37e-23,29;UBERON:0002791,2.37e-23,29;UBERON:0001893,2.37e-23,29;UBERON:0002780,1.45e-22,39;UBERON:0001890,1.45e-22,39;UBERON:0006240,1.45e-22,39;UBERON:0010314,2.83e-18,92;UBERON:0000956,3.43e-16,21;UBERON:0001869,3.43e-16,21;UBERON:0000203,3.43e-16,21;UBERON:0002619,8.08e-13,17;UBERON:0003076,3.78e-09,12;UBERON:0003057,3.78e-09,12;UBERON:0002420,2.63e-08,8;UBERON:0007245,2.63e-08,8;UBERON:0010009,2.63e-08,8;UBERON:0010011,2.63e-08,8;UBERON:0000454,2.63e-08,8;UBERON:0001954,2.39e-07,7;UBERON:0003022,2.39e-07,7;UBERON:0002421,2.39e-07,7;UBERON:0000349,2.39e-07,7;UBERON:0002600,2.39e-07,7;UBERON:0002021,4.93e-07,10;UBERON:0000411,4.93e-07,10;UBERON:0001950,4.93e-07,10|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,17.0059621976748,36.9072786993913,26.4424662741025,5.73944328663986,15.8127820801469,0,0,0,0,0,0,27.5150386769053,21.1596391708813,27.2547503507657,3.72728985276045,2.66788438833342,0,0,0.7104801149461,8.98800331555214,9.98967593836042,17.3161652555158,20.2508907497536,18.2982716375702,16.2821061110168,14.7981922437581,16.046294697159,16.1978846020819,17.4651569455904,1.10115880999389,8.04430229936683,7.98753972932466,24.9265083810066,32.0206752608434,18.7528813400434,9.49222196604695,9.00420176050688,9.93188610549266,13.258286346315,13.5253096759148,24.4183274031144,0.757261933331841,1.13357340160178,1.44932244350839,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,4.50698943285378,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0.904335843315735,0.587943535678524,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0,0,0,9.28701964309901,4.11750542536764,36.3141077606178,4.34560800480691,5.62574006126727,7.68815764870372,7.30085683804909,1.01839363850316,0.497627882440372,0,0.631325567659422,0,1.60931473103431,1.80062129805349,1.50704817835715,2.78949646520444,1.5373646434182,2.71735001223214,1.81092359517311,0.431135985865684,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402619256281115,2.3131894342054,23.7709654596147,0,0,0,0,0.515469845288373,0.403367049246685,0.22237804384487,0,0,0.658795818896044,0.502670417600539,0,0.779856348476481,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.775809948670503,0.350679099451593,0.569128834118316,0.442830443938806,0.156998727841375,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.502518772325447,0,0,0,0,0.159454768657487,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0,0.275936746304732,4.33486592967038,6.32943107597897,0,0,1.89304931649754,0.390438744296638,1.93881057959519,0.716906393857656,1.78238939265915,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,0.963963949265421,0.567760340833074,0.178065603667255,0.81443479676788,0.989820737835213,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.03371317267288,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.905510786479282,1.92903331528433,5.32020700926821,3.38900753443934,0.987294123612726,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.482503399425247,0.477489376012546,0,0.291480836629851,4.82105785227325,0,0.82554747185289,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.756037385752609,0.627264888043406,0.218362563746178,0.674321731924103,0.247960367176008,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0.375364950902364,0.549454872801795,0.214368379079066,0,7.34177395402186,4.60325236507177,7.44764167471216,8.42080593484069,4.11049511862385,1.5107877947794,6.75022500231806,4.05289082901798,3.62513927187364,4.14208249401456,0.31136204275253,1.99512436700516,2.90247129782028,2.91728060481953,2.30574478890781,1.47074806760011,2.889207461421,3.7086310303001,2.88827288632634,1.76888048234658,4.30914809813408,2.82939512079114,3.7456602987953,5.05798703998467,4.59483751644906,6.66811167796303,5.33067899346335,4.82273051159263,7.82963211526283,2.64958056241915,4.80016953339582,1.4198064492747,3.09967046931517,2.90692833264657,3.19971893412124,3.29996970777538,3.47563148458268,2.89376682581627,2.30866993537965,2.80571135828869,4.27086065247027,5.22073756590486,5.72923460437565,3.71848418846318,2.3148793317737,12.9901500527732,3.50897412668113,4.08255002691767,0.956441660344217,0.220591419119515,0|short_description=p@chr9:20550791..20550812,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3015 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:20550791..20550812,- | |||
|id=chr9:20550791..20550812,- | |||
|ontology_enrichment_celltype=CL:0000221!8.51e-21!44;CL:0000133!8.51e-21!44;CL:0002319!2.53e-20!43;CL:0000117!9.61e-16!23;CL:0000337!9.61e-16!23;CL:0000540!2.35e-15!33;CL:0000047!2.35e-15!33;CL:0000031!2.35e-15!33;CL:0000404!2.35e-15!33;CL:0000055!1.24e-14!50;CL:0000393!9.28e-11!39;CL:0000211!9.28e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.68e-23,44;CL:0000133,1.68e-23,44;CL:0002319,7.40e-23,43;CL:0000117,2.70e-21,23;CL:0000337,2.70e-21,23;CL:0000540,5.03e-17,33;CL:0000047,5.03e-17,33;CL:0000031,5.03e-17,33;CL:0000404,5.03e-17,33;CL:0000393,8.91e-13,39;CL:0000211,8.91e-13,39;CL:0002321,3.29e-10,70;CL:0002453,9.97e-08,8;CL:0002609,6.01e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.15e-34!75;UBERON:0001016!3.15e-34!75;UBERON:0001017!5.33e-34!73;UBERON:0005743!5.33e-34!73;UBERON:0004121!3.39e-32!102;UBERON:0000924!3.39e-32!102;UBERON:0006601!3.39e-32!102;UBERON:0002346!8.11e-27!71;UBERON:0003075!8.11e-27!71;UBERON:0007284!8.11e-27!71;UBERON:0001049!1.15e-26!52;UBERON:0005068!1.15e-26!52;UBERON:0006241!1.15e-26!52;UBERON:0007135!1.15e-26!52;UBERON:0000033!1.68e-24!63;UBERON:0000955!5.53e-24!50;UBERON:0006238!5.53e-24!50;UBERON:0002616!6.51e-24!49;UBERON:0002020!1.25e-20!34;UBERON:0003056!1.42e-20!49;UBERON:0003080!3.66e-20!40;UBERON:0002780!1.55e-19!39;UBERON:0001890!1.55e-19!39;UBERON:0006240!1.55e-19!39;UBERON:0002791!3.21e-17!29;UBERON:0003528!3.21e-17!29;UBERON:0001893!3.21e-17!29;UBERON:0000956!4.44e-12!21;UBERON:0001869!4.44e-12!21;UBERON:0000203!4.44e-12!21;UBERON:0007811!4.11e-11!86;UBERON:0000153!2.82e-10!94;UBERON:0002619!1.18e-09!17;UBERON:0003076!5.20e-07!12;UBERON:0003057!5.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.68e-37,73;UBERON:0001016,6.03e-37,75;UBERON:0000073,1.68e-33,54;UBERON:0004121,3.52e-33,95;UBERON:0000924,3.52e-33,95;UBERON:0006601,3.52e-33,95;UBERON:0002346,9.68e-33,64;UBERON:0003075,9.68e-33,64;UBERON:0007284,9.68e-33,64;UBERON:0001049,2.68e-32,52;UBERON:0005068,2.68e-32,52;UBERON:0006241,2.68e-32,52;UBERON:0007135,2.68e-32,52;UBERON:0010371,2.04e-28,73;UBERON:0002020,4.13e-28,34;UBERON:0002616,9.57e-27,46;UBERON:0000955,7.92e-26,47;UBERON:0006238,7.92e-26,47;UBERON:0003056,7.12e-24,49;UBERON:0003080,2.07e-23,40;UBERON:0003528,2.37e-23,29;UBERON:0002791,2.37e-23,29;UBERON:0001893,2.37e-23,29;UBERON:0002780,1.45e-22,39;UBERON:0001890,1.45e-22,39;UBERON:0006240,1.45e-22,39;UBERON:0010314,2.83e-18,92;UBERON:0000956,3.43e-16,21;UBERON:0001869,3.43e-16,21;UBERON:0000203,3.43e-16,21;UBERON:0002619,8.08e-13,17;UBERON:0003076,3.78e-09,12;UBERON:0003057,3.78e-09,12;UBERON:0002420,2.63e-08,8;UBERON:0007245,2.63e-08,8;UBERON:0010009,2.63e-08,8;UBERON:0010011,2.63e-08,8;UBERON:0000454,2.63e-08,8;UBERON:0001954,2.39e-07,7;UBERON:0003022,2.39e-07,7;UBERON:0002421,2.39e-07,7;UBERON:0000349,2.39e-07,7;UBERON:0002600,2.39e-07,7;UBERON:0002021,4.93e-07,10;UBERON:0000411,4.93e-07,10;UBERON:0001950,4.93e-07,10 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,2.34717403304412,17.0059621976748,36.9072786993913,26.4424662741025,5.73944328663986,15.8127820801469,0,0,0,0,0,0,27.5150386769053,21.1596391708813,27.2547503507657,3.72728985276045,2.66788438833342,0,0,0.7104801149461,8.98800331555214,9.98967593836042,17.3161652555158,20.2508907497536,18.2982716375702,16.2821061110168,14.7981922437581,16.046294697159,16.1978846020819,17.4651569455904,1.10115880999389,8.04430229936683,7.98753972932466,24.9265083810066,32.0206752608434,18.7528813400434,9.49222196604695,9.00420176050688,9.93188610549266,13.258286346315,13.5253096759148,24.4183274031144,0.757261933331841,1.13357340160178,1.44932244350839,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,4.50698943285378,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0.904335843315735,0.587943535678524,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0,0,0,9.28701964309901,4.11750542536764,36.3141077606178,4.34560800480691,5.62574006126727,7.68815764870372,7.30085683804909,1.01839363850316,0.497627882440372,0,0.631325567659422,0,1.60931473103431,1.80062129805349,1.50704817835715,2.78949646520444,1.5373646434182,2.71735001223214,1.81092359517311,0.431135985865684,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402619256281115,2.3131894342054,23.7709654596147,0,0,0,0,0.515469845288373,0.403367049246685,0.22237804384487,0,0,0.658795818896044,0.502670417600539,0,0.779856348476481,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.775809948670503,0.350679099451593,0.569128834118316,0.442830443938806,0.156998727841375,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.502518772325447,0,0,0,0,0.159454768657487,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0,0.275936746304732,4.33486592967038,6.32943107597897,0,0,1.89304931649754,0.390438744296638,1.93881057959519,0.716906393857656,1.78238939265915,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,0.963963949265421,0.567760340833074,0.178065603667255,0.81443479676788,0.989820737835213,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.03371317267288,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.905510786479282,1.92903331528433,5.32020700926821,3.38900753443934,0.987294123612726,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.482503399425247,0.477489376012546,0,0.291480836629851,4.82105785227325,0,0.82554747185289,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.756037385752609,0.627264888043406,0.218362563746178,0.674321731924103,0.247960367176008,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0.375364950902364,0.549454872801795,0.214368379079066,0,7.34177395402186,4.60325236507177,7.44764167471216,8.42080593484069,4.11049511862385,1.5107877947794,6.75022500231806,4.05289082901798,3.62513927187364,4.14208249401456,0.31136204275253,1.99512436700516,2.90247129782028,2.91728060481953,2.30574478890781,1.47074806760011,2.889207461421,3.7086310303001,2.88827288632634,1.76888048234658,4.30914809813408,2.82939512079114,3.7456602987953,5.05798703998467,4.59483751644906,6.66811167796303,5.33067899346335,4.82273051159263,7.82963211526283,2.64958056241915,4.80016953339582,1.4198064492747,3.09967046931517,2.90692833264657,3.19971893412124,3.29996970777538,3.47563148458268,2.89376682581627,2.30866993537965,2.80571135828869,4.27086065247027,5.22073756590486,5.72923460437565,3.71848418846318,2.3148793317737,12.9901500527732,3.50897412668113,4.08255002691767,0.956441660344217,0.220591419119515,0 | |||
|short_description=p@chr9:20550791..20550812,- | |||
}} |
Revision as of 17:24, 14 September 2013
Short description: | p@chr9:20550791..20550812, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:20550791..20550812, - |
Coexpression cluster: | MCL_coexpression_mm9:3015 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.68e-23 | 44 |
neurectodermal cell | 1.68e-23 | 44 |
neural cell | 7.40e-23 | 43 |
CNS neuron (sensu Vertebrata) | 2.70e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.70e-21 | 23 |
neuron | 5.03e-17 | 33 |
neuronal stem cell | 5.03e-17 | 33 |
neuroblast | 5.03e-17 | 33 |
electrically signaling cell | 5.03e-17 | 33 |
electrically responsive cell | 8.91e-13 | 39 |
electrically active cell | 8.91e-13 | 39 |
embryonic cell | 3.29e-10 | 70 |
oligodendrocyte precursor cell | 9.97e-08 | 8 |
neuron of cerebral cortex | 6.01e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.