FFCP PHASE1:Mm9::chr8:3625025..3625042,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18545|HGNC=|MCL_coexpression_id=30|UniProt=P12660|association_with_transcript=6bp_to_ENSMUST00000133459,NM_001129804,uc009ksa.2_5end|description=CAGE_peak_2_at_Pcp2_5end|id=chr8:3625025..3625042,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,2.12e-12,3;CL:0000710,8.42e-10,1;CL:0002077,8.42e-10,1;CL:0005014,8.42e-10,1;CL:0002315,8.42e-10,1;CL:0002490,8.42e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.73e-09!63;UBERON:0003076!2.70e-08!12;UBERON:0003057!2.70e-08!12;UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102;UBERON:0001017!2.54e-07!73;UBERON:0005743!2.54e-07!73;UBERON:0000073!5.85e-07!75;UBERON:0001016!5.85e-07!75;UBERON:0002298!8.01e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004733,4.07e-14,6;UBERON:0004732,4.07e-14,6;UBERON:0002028,4.07e-14,6;UBERON:0007277,4.07e-14,6;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6714502325094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,24.2889209131201,0,0.15279824777681,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,1.40843419776681,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,432.437237186055,282.753054198164,0,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.643011105094777,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.384150914429216,0.17230640686684,0,0.347652977834566,0,0,0.441596760403192,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0|short_description=p2@Pcp2}} | ||
|EntrezGene=18545 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=P12660 | |||
|association_with_transcript=6bp_to_ENSMUST00000133459,NM_001129804,uc009ksa.2_5end | |||
|description=CAGE_peak_2_at_Pcp2_5end | |||
|id=chr8:3625025..3625042,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.12e-12,3;CL:0000710,8.42e-10,1;CL:0002077,8.42e-10,1;CL:0005014,8.42e-10,1;CL:0002315,8.42e-10,1;CL:0002490,8.42e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.73e-09!63;UBERON:0003076!2.70e-08!12;UBERON:0003057!2.70e-08!12;UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102;UBERON:0001017!2.54e-07!73;UBERON:0005743!2.54e-07!73;UBERON:0000073!5.85e-07!75;UBERON:0001016!5.85e-07!75;UBERON:0002298!8.01e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,4.07e-14,6;UBERON:0004732,4.07e-14,6;UBERON:0002028,4.07e-14,6;UBERON:0007277,4.07e-14,6;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6714502325094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0.153606533256243,0,0,0,24.2889209131201,0,0.15279824777681,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,1.40843419776681,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,432.437237186055,282.753054198164,0,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0.431135985865684,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.776152102696527,0.643011105094777,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.384150914429216,0.17230640686684,0,0.347652977834566,0,0,0.441596760403192,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 | |||
|short_description=p2@Pcp2 | |||
}} |
Revision as of 15:33, 14 September 2013
Short description: | p2@Pcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 6bp_to_ENSMUST00000133459, NM_001129804, uc009ksa.2_5end |
EntrezGene: | Pcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.12e-12 | 3 |
neurecto-epithelial cell | 8.42e-10 | 1 |
ecto-epithelial cell | 8.42e-10 | 1 |
auditory epithelial support cell | 8.42e-10 | 1 |
supporting cell of cochlea | 8.42e-10 | 1 |
organ of Corti supporting cell | 8.42e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 4.07e-14 | 6 |
segmental subdivision of nervous system | 4.07e-14 | 6 |
hindbrain | 4.07e-14 | 6 |
presumptive hindbrain | 4.07e-14 | 6 |
cerebellum | 4.16e-10 | 4 |
regional part of metencephalon | 4.16e-10 | 4 |
metencephalon | 4.16e-10 | 4 |
future metencephalon | 4.16e-10 | 4 |
rhombic lip | 4.16e-10 | 4 |
posterior neural tube | 2.36e-07 | 12 |
chordal neural plate | 2.36e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.