FFCP PHASE1:Mm9::chr8:108091532..108091548,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:108091532..108091548,-|id=chr8:108091532..108091548,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.74e-24,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!1.28e-11!7;UBERON:0006858!1.28e-11!7;UBERON:0002950!2.89e-08!4;UBERON:0001891!2.89e-08!4;UBERON:0009616!2.89e-08!4;UBERON:0002342!5.05e-08!10;UBERON:0005062!5.05e-08!10;UBERON:0002346!4.80e-07!71;UBERON:0003075!4.80e-07!71;UBERON:0007284!4.80e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.48e-40,4;UBERON:0001891,8.48e-40,4;UBERON:0009616,8.48e-40,4;UBERON:0010286,8.48e-40,4;UBERON:0002038,1.74e-24,3;UBERON:0009663,1.74e-24,3;UBERON:0009661,1.74e-24,3;UBERON:0000125,1.74e-24,3;UBERON:0002308,1.74e-24,3;UBERON:0002259,2.59e-18,1;UBERON:0002314,2.59e-18,1;UBERON:0004061,2.59e-18,1;UBERON:0006777,2.59e-18,1;UBERON:0005882,2.59e-18,1;UBERON:0002420,7.26e-10,8;UBERON:0007245,7.26e-10,8;UBERON:0010009,7.26e-10,8;UBERON:0010011,7.26e-10,8;UBERON:0000454,7.26e-10,8;UBERON:0003080,1.27e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8180148106653,16.3494125121187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11728492036132,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0.493647061806363,2.13125464380219,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:108091532..108091548,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:108091532..108091548,- | |||
|id=chr8:108091532..108091548,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.74e-24,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!1.28e-11!7;UBERON:0006858!1.28e-11!7;UBERON:0002950!2.89e-08!4;UBERON:0001891!2.89e-08!4;UBERON:0009616!2.89e-08!4;UBERON:0002342!5.05e-08!10;UBERON:0005062!5.05e-08!10;UBERON:0002346!4.80e-07!71;UBERON:0003075!4.80e-07!71;UBERON:0007284!4.80e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.48e-40,4;UBERON:0001891,8.48e-40,4;UBERON:0009616,8.48e-40,4;UBERON:0010286,8.48e-40,4;UBERON:0002038,1.74e-24,3;UBERON:0009663,1.74e-24,3;UBERON:0009661,1.74e-24,3;UBERON:0000125,1.74e-24,3;UBERON:0002308,1.74e-24,3;UBERON:0002259,2.59e-18,1;UBERON:0002314,2.59e-18,1;UBERON:0004061,2.59e-18,1;UBERON:0006777,2.59e-18,1;UBERON:0005882,2.59e-18,1;UBERON:0002420,7.26e-10,8;UBERON:0007245,7.26e-10,8;UBERON:0010009,7.26e-10,8;UBERON:0010011,7.26e-10,8;UBERON:0000454,7.26e-10,8;UBERON:0003080,1.27e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8180148106653,16.3494125121187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11728492036132,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.178368817602071,0.493647061806363,2.13125464380219,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:108091532..108091548,- | |||
}} |
Revision as of 14:36, 14 September 2013
Short description: | p@chr8:108091532..108091548, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:108091532..108091548, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.74e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 8.48e-40 | 4 |
midbrain | 8.48e-40 | 4 |
presumptive midbrain | 8.48e-40 | 4 |
midbrain neural tube | 8.48e-40 | 4 |
substantia nigra | 1.74e-24 | 3 |
telencephalic nucleus | 1.74e-24 | 3 |
midbrain nucleus | 1.74e-24 | 3 |
neural nucleus | 1.74e-24 | 3 |
nucleus of brain | 1.74e-24 | 3 |
corpora quadrigemina | 2.59e-18 | 1 |
midbrain tectum | 2.59e-18 | 1 |
neural tube mantle layer | 2.59e-18 | 1 |
tectal plate | 2.59e-18 | 1 |
neural tube alar plate | 2.59e-18 | 1 |
basal ganglion | 7.26e-10 | 8 |
nuclear complex of neuraxis | 7.26e-10 | 8 |
aggregate regional part of brain | 7.26e-10 | 8 |
collection of basal ganglia | 7.26e-10 | 8 |
cerebral subcortex | 7.26e-10 | 8 |
anterior neural tube | 1.27e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.