FFCP PHASE1:Mm9::chr7:91300576..91300628,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=70178|HGNC=|UniProt=Q8VCV1|association_with_transcript=-173bp_to_ENSMUST00000038277,ENSMUST00000117085,NM_133722,uc009ied.2_5end|description=CAGE_peak_2_at_Fam108c_5end|id=chr7:91300576..91300628,-|ontology_enrichment_celltype=CL:0000117!6.02e-08!23;CL:0000337!6.02e-08!23;CL:0000221!6.93e-07!44;CL:0000133!6.93e-07!44;CL:0002319!9.99e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.02e-08,23;CL:0000337,6.02e-08,23;CL:0000221,6.93e-07,44;CL:0000133,6.93e-07,44;CL:0002319,9.99e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=11.0502704502308,5.23463111459042,5.91499011206397,5.74682001482977,6.51164448930251,8.56184286750638,5.84031601488814,13.5579489613655,8.30653460694834,11.7032263160997,11.3003859028833,14.2792164601652,5.47842335779858,5.68232615723483,8.32774404539157,3.44207954562704,2.79824751251259,6.30924330716475,5.75880621144103,7.21462408056651,11.8210173309987,6.15603897445489,2.87319768052829,8.31960598525715,7.57050627521661,6.89078356938024,8.18447792702242,6.24866574789078,7.9809836171677,11.8454160987167,8.20402889424627,17.7808588568697,17.8368788399525,31.6963362030877,12.4206196493048,16.7896991812077,13.4751775133164,6.69650609179052,7.0320181007142,6.28228492768558,8.2352408324342,8.87959130445979,13.1087795318411,8.68688044031483,9.93493925951243,11.9305388905093,21.9069576417451,20.7123898561424,18.2339531669612,12.6379434398284,12.1788186814065,27.3129872293446,4.19456515144341,7.97898356212479,7.39406358113421,10.2903774414379,13.4670716771216,6.18806510732931,41.2725580153579,30.6814767977779,50.0726808769882,15.9256930072492,19.5644855144451,25.6471419425199,15.8218618010716,26.2877642530057,28.4620104992484,35.7323023949046,47.4898424372828,45.0919834027847,44.1682418837902,27.1368435183613,21.4242484723065,44.2191785165984,28.7536413054709,59.7492211296514,9.91042928994498,12.896421146604,10.1380311949121,37.3238194276449,27.4462930807229,33.8593690861894,10.0505879640497,10.1297269805702,9.47349136216223,22.3917724959987,21.9252388430619,39.5166825149637,8.93569081331572,6.8014404096107,5.50742528533188,7.74381489283248,23.1190253460635,13.4925797909454,10.3964226791627,17.4730485967961,12.3591089715942,6.81721290312231,4.41636207824877,7.0667914902068,15.3519327556582,5.13305909657271,15.2883143823987,7.11066703153331,8.01016851741492,10.1343946190039,11.62706223534,16.5566625592637,2.84831672011889,14.1020032111584,11.6235168933311,6.69824052286711,9.4552353874984,8.28974523039424,9.7598626922635,16.3366568728578,14.0901131608593,9.83275627055399,9.73071607144862,10.676612096529,6.40440403535141,4.363877278217,16.775258509631,7.90508151931177,7.95897485891129,14.8165092020983,7.0690923458493,2.99951365496704,4.3203877204842,9.13722900369418,10.0650132620098,39.2041578592137,15.4703644971126,11.5071955798649,7.06479351502504,9.89671704713322,15.3777439413978,7.96204611904595,6.06534620240819,4.8401626853889,13.5325260681212,12.644615743841,16.9258402017028,12.3577950625286,14.9680298132921,9.99287018221828,13.6804517857204,3.62184719034622,23.9280472155455,15.695804653929,13.1963343122962,13.1517439456545,10.5657954705727,15.6713474934975,6.99659263787008,15.1266042782055,2.1066395619397,5.66165395652373,14.2081749697796,19.8840741634082,13.6025114789036,15.6653993471083,21.5437709382541,17.3152523937715,18.357786433598,19.9979192485351,21.7301455133692,21.368057653192,16.6205448412615,12.148392341853,15.3220050041667,13.4503988431306,7.46470391989572,12.3469905259542,17.0334858336943,37.6630881308181,7.59963200862735,13.7514294665043,12.5840067815788,15.7920936865098,15.4640953586512,18.9582513145942,14.6769508937614,17.5007576023554,12.8122846617018,9.38784041926862,13.069430857614,16.1154742353332,15.5971269695296,9.88701349519644,14.4812493416045,10.1562049359727,18.3977863924489,12.9100819248994,15.7790829942313,14.8665469327079,13.5766741017338,18.5859922709344,21.7533687707445,19.1893192373483,24.0208053597303,12.3397163921801,4.74324203339438,13.8481437744358,18.4765455406411,12.8171404059367,13.5916281330297,17.364755502174,13.2405442926338,15.247895284893,18.8076863059041,8.51140380883053,37.3797336971122,15.2577788544086,13.1055822708115,13.1341016532498,10.4050499842709,8.68398338454061,20.6923572986597,21.7915123536057,15.6446377384345,12.3913912615887,14.0814148973101,20.6032696653433,14.5206620940468,24.5868396300827,11.9802709520705,13.5093460685753,22.0047580747332,18.0249646187312,19.5134029508462,19.6722719670856,10.5553898757491,11.4220193601929,9.34352118736169,6.89841865761831,8.50918126935297,5.97779601620236,16.7213644284209,4.29200576247434,10.0962630213202,13.6653560503823,12.2791336707695,10.9925647058174,9.80314165962534,17.8338214396964,12.1443210502468,9.64444331107329,8.30104333687699,14.7807805554031,12.7746076687442,14.9575107080494,14.1711654637611,11.0529982391599,23.8941249011933,10.1967867185092,17.2324427469908,10.1846743068185,11.5167738223501,10.7602301780375,9.56184684722418,12.7236805317127,15.6858846489277,18.0140952023415,6.32511651449993,29.9093075419742,6.46835250932197,16.9257428389432,15.1349660025823,13.7175702420219,10.6404140185364,12.1290795969408,10.2020392773315,11.8741330154694,6.8054795338476,11.8625959683739,10.5853631066382,17.4779428117969,14.8547272560233,15.0179183071108,14.4440536243795,13.1312719796049,13.699599321603,12.0526446306831,9.56876932467975,12.5895989457566,6.48180845793991,5.46268525313604,5.60446333656203,5.94823250336959,4.75939603982795,4.61839792668071,6.35719879500349,10.5013767981662,17.556647643753,10.3692928234693,13.068646239438,8.36353184057875,11.3548533148012,9.30563990055263,12.6459787259764,9.16145796944104,13.4799572223465,12.4267862617385,16.9107881605257,12.7089064137382,11.913011312911,11.8615224889869,9.68698676082983,14.5302267922069,11.7357238645754,15.3641174115861,10.171356409294,11.8376219204743,9.21696020025169,13.9044893076398,9.32535990334755,9.14127518766963,10.3936658382236,12.3528420010562,14.7024202538136,11.1781768053571,13.2920574457119,7.26958439626663,12.574123098075,13.3090564380629,14.5212242302231,13.3734459880058,16.4796432076012,9.9761368790693,7.32553646134413,4.21655126064536,3.8613461763738,9.27310051354514,8.44571139530319,12.454310450174,18.0069438426415,9.5298699766719,10.1655331671072,7.36520378411483,12.6037012956667,14.7793736815571,3.42541259885321,8.3093328712867,7.42524750254986,9.00642406448441,5.89085131679466,6.21312374102184,17.7476364368942,13.5668456956351,13.8294220660849,15.5588298923708,21.1709294254262,25.0027171492019,10.4455962066759,8.44743734679466,12.194929964489,16.6780159764106,10.1391719956096,10.9403278003924,16.1063392848198,17.0947156921001,17.2880761556396,11.4310485907938,17.4985332176732,16.0114652984875,9.89006161927936,11.1871179302142,6.85738504770831,7.27650805253284,10.7296285476294,12.4997918303803,12.6106569756543,13.1152642232099,8.78054269789308,9.73357932320019,13.4446072707403,3.36685362994643,15.5411873742668,17.9278157923526,7.36615877705441,14.8739367538527,16.9757817663404,21.4837097026634,17.5448706334056,14.6112316752843,8.03410994689142,9.04424818390014,6.26043156175138|short_description=p2@Fam108c}} | ||
|EntrezGene=70178 | |||
|HGNC= | |||
|UniProt=Q8VCV1 | |||
|association_with_transcript=-173bp_to_ENSMUST00000038277,ENSMUST00000117085,NM_133722,uc009ied.2_5end | |||
|description=CAGE_peak_2_at_Fam108c_5end | |||
|id=chr7:91300576..91300628,- | |||
|ontology_enrichment_celltype=CL:0000117!6.02e-08!23;CL:0000337!6.02e-08!23;CL:0000221!6.93e-07!44;CL:0000133!6.93e-07!44;CL:0002319!9.99e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.02e-08,23;CL:0000337,6.02e-08,23;CL:0000221,6.93e-07,44;CL:0000133,6.93e-07,44;CL:0002319,9.99e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=11.0502704502308,5.23463111459042,5.91499011206397,5.74682001482977,6.51164448930251,8.56184286750638,5.84031601488814,13.5579489613655,8.30653460694834,11.7032263160997,11.3003859028833,14.2792164601652,5.47842335779858,5.68232615723483,8.32774404539157,3.44207954562704,2.79824751251259,6.30924330716475,5.75880621144103,7.21462408056651,11.8210173309987,6.15603897445489,2.87319768052829,8.31960598525715,7.57050627521661,6.89078356938024,8.18447792702242,6.24866574789078,7.9809836171677,11.8454160987167,8.20402889424627,17.7808588568697,17.8368788399525,31.6963362030877,12.4206196493048,16.7896991812077,13.4751775133164,6.69650609179052,7.0320181007142,6.28228492768558,8.2352408324342,8.87959130445979,13.1087795318411,8.68688044031483,9.93493925951243,11.9305388905093,21.9069576417451,20.7123898561424,18.2339531669612,12.6379434398284,12.1788186814065,27.3129872293446,4.19456515144341,7.97898356212479,7.39406358113421,10.2903774414379,13.4670716771216,6.18806510732931,41.2725580153579,30.6814767977779,50.0726808769882,15.9256930072492,19.5644855144451,25.6471419425199,15.8218618010716,26.2877642530057,28.4620104992484,35.7323023949046,47.4898424372828,45.0919834027847,44.1682418837902,27.1368435183613,21.4242484723065,44.2191785165984,28.7536413054709,59.7492211296514,9.91042928994498,12.896421146604,10.1380311949121,37.3238194276449,27.4462930807229,33.8593690861894,10.0505879640497,10.1297269805702,9.47349136216223,22.3917724959987,21.9252388430619,39.5166825149637,8.93569081331572,6.8014404096107,5.50742528533188,7.74381489283248,23.1190253460635,13.4925797909454,10.3964226791627,17.4730485967961,12.3591089715942,6.81721290312231,4.41636207824877,7.0667914902068,15.3519327556582,5.13305909657271,15.2883143823987,7.11066703153331,8.01016851741492,10.1343946190039,11.62706223534,16.5566625592637,2.84831672011889,14.1020032111584,11.6235168933311,6.69824052286711,9.4552353874984,8.28974523039424,9.7598626922635,16.3366568728578,14.0901131608593,9.83275627055399,9.73071607144862,10.676612096529,6.40440403535141,4.363877278217,16.775258509631,7.90508151931177,7.95897485891129,14.8165092020983,7.0690923458493,2.99951365496704,4.3203877204842,9.13722900369418,10.0650132620098,39.2041578592137,15.4703644971126,11.5071955798649,7.06479351502504,9.89671704713322,15.3777439413978,7.96204611904595,6.06534620240819,4.8401626853889,13.5325260681212,12.644615743841,16.9258402017028,12.3577950625286,14.9680298132921,9.99287018221828,13.6804517857204,3.62184719034622,23.9280472155455,15.695804653929,13.1963343122962,13.1517439456545,10.5657954705727,15.6713474934975,6.99659263787008,15.1266042782055,2.1066395619397,5.66165395652373,14.2081749697796,19.8840741634082,13.6025114789036,15.6653993471083,21.5437709382541,17.3152523937715,18.357786433598,19.9979192485351,21.7301455133692,21.368057653192,16.6205448412615,12.148392341853,15.3220050041667,13.4503988431306,7.46470391989572,12.3469905259542,17.0334858336943,37.6630881308181,7.59963200862735,13.7514294665043,12.5840067815788,15.7920936865098,15.4640953586512,18.9582513145942,14.6769508937614,17.5007576023554,12.8122846617018,9.38784041926862,13.069430857614,16.1154742353332,15.5971269695296,9.88701349519644,14.4812493416045,10.1562049359727,18.3977863924489,12.9100819248994,15.7790829942313,14.8665469327079,13.5766741017338,18.5859922709344,21.7533687707445,19.1893192373483,24.0208053597303,12.3397163921801,4.74324203339438,13.8481437744358,18.4765455406411,12.8171404059367,13.5916281330297,17.364755502174,13.2405442926338,15.247895284893,18.8076863059041,8.51140380883053,37.3797336971122,15.2577788544086,13.1055822708115,13.1341016532498,10.4050499842709,8.68398338454061,20.6923572986597,21.7915123536057,15.6446377384345,12.3913912615887,14.0814148973101,20.6032696653433,14.5206620940468,24.5868396300827,11.9802709520705,13.5093460685753,22.0047580747332,18.0249646187312,19.5134029508462,19.6722719670856,10.5553898757491,11.4220193601929,9.34352118736169,6.89841865761831,8.50918126935297,5.97779601620236,16.7213644284209,4.29200576247434,10.0962630213202,13.6653560503823,12.2791336707695,10.9925647058174,9.80314165962534,17.8338214396964,12.1443210502468,9.64444331107329,8.30104333687699,14.7807805554031,12.7746076687442,14.9575107080494,14.1711654637611,11.0529982391599,23.8941249011933,10.1967867185092,17.2324427469908,10.1846743068185,11.5167738223501,10.7602301780375,9.56184684722418,12.7236805317127,15.6858846489277,18.0140952023415,6.32511651449993,29.9093075419742,6.46835250932197,16.9257428389432,15.1349660025823,13.7175702420219,10.6404140185364,12.1290795969408,10.2020392773315,11.8741330154694,6.8054795338476,11.8625959683739,10.5853631066382,17.4779428117969,14.8547272560233,15.0179183071108,14.4440536243795,13.1312719796049,13.699599321603,12.0526446306831,9.56876932467975,12.5895989457566,6.48180845793991,5.46268525313604,5.60446333656203,5.94823250336959,4.75939603982795,4.61839792668071,6.35719879500349,10.5013767981662,17.556647643753,10.3692928234693,13.068646239438,8.36353184057875,11.3548533148012,9.30563990055263,12.6459787259764,9.16145796944104,13.4799572223465,12.4267862617385,16.9107881605257,12.7089064137382,11.913011312911,11.8615224889869,9.68698676082983,14.5302267922069,11.7357238645754,15.3641174115861,10.171356409294,11.8376219204743,9.21696020025169,13.9044893076398,9.32535990334755,9.14127518766963,10.3936658382236,12.3528420010562,14.7024202538136,11.1781768053571,13.2920574457119,7.26958439626663,12.574123098075,13.3090564380629,14.5212242302231,13.3734459880058,16.4796432076012,9.9761368790693,7.32553646134413,4.21655126064536,3.8613461763738,9.27310051354514,8.44571139530319,12.454310450174,18.0069438426415,9.5298699766719,10.1655331671072,7.36520378411483,12.6037012956667,14.7793736815571,3.42541259885321,8.3093328712867,7.42524750254986,9.00642406448441,5.89085131679466,6.21312374102184,17.7476364368942,13.5668456956351,13.8294220660849,15.5588298923708,21.1709294254262,25.0027171492019,10.4455962066759,8.44743734679466,12.194929964489,16.6780159764106,10.1391719956096,10.9403278003924,16.1063392848198,17.0947156921001,17.2880761556396,11.4310485907938,17.4985332176732,16.0114652984875,9.89006161927936,11.1871179302142,6.85738504770831,7.27650805253284,10.7296285476294,12.4997918303803,12.6106569756543,13.1152642232099,8.78054269789308,9.73357932320019,13.4446072707403,3.36685362994643,15.5411873742668,17.9278157923526,7.36615877705441,14.8739367538527,16.9757817663404,21.4837097026634,17.5448706334056,14.6112316752843,8.03410994689142,9.04424818390014,6.26043156175138 | |||
|short_description=p2@Fam108c | |||
}} | |||
Revision as of 14:24, 14 September 2013
| Short description: | p2@Fam108c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Fam108c_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -173bp_to_ENSMUST00000038277, ENSMUST00000117085, NM_133722, uc009ied.2_5end |
| EntrezGene: | Fam108c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 6.02e-08 | 23 |
| neuroblast (sensu Vertebrata) | 6.02e-08 | 23 |
| ectodermal cell | 6.93e-07 | 44 |
| neurectodermal cell | 6.93e-07 | 44 |
| neural cell | 9.99e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
