FFCP PHASE1:Mm9::chr7:88092385..88092465,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56529|HGNC=|UniProt=D3YTS1,Q9R0P6,Q6PET3,D3YWT0|association_with_transcript=0bp_to_ENSMUST00000120285,ENSMUST00000147813,ENSMUST00000147881,NM_019951,uc009ibn.1,uc009ibo.1_5end|description=CAGE_peak_1_at_Sec11a_5end|id=chr7:88092385..88092465,-|ontology_enrichment_celltype=CL:0000084!2.62e-07!11;CL:0000827!2.62e-07!11;CL:0000542!2.92e-07!13;CL:0000051!2.92e-07!13;CL:0000838!5.21e-07!12|ontology_enrichment_celltype_v019_2=CL:0000084,2.62e-07,11;CL:0000827,2.62e-07,11;CL:0000542,2.92e-07,13;CL:0000051,2.92e-07,13;CL:0000838,5.21e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.26e-07!193;UBERON:0004120!2.26e-07!193;UBERON:0006603!2.26e-07!193;UBERON:0004119!4.64e-07!130;UBERON:0000925!4.64e-07!130;UBERON:0006595!4.64e-07!130|ontology_enrichment_uberon_v019_2=|phase1_expression=91.2848428497326,57.2319668528552,51.4149140510176,34.7833843002855,34.0609096363516,64.9692782299013,68.9157289756801,101.878302195404,90.8087257878251,104.392778739609,96.0532801745083,110.723756685527,107.514058396797,132.092228055105,35.9758542760916,42.3173308844736,34.9780939064073,62.3037776582519,57.8622909816218,55.595044385542,59.6153463958999,78.6384333511012,94.5543236682946,85.4359537716792,73.8697885036287,74.6501553349526,83.1370652587014,90.9288601934452,87.6007963693884,84.4300934695768,143.459640393982,31.1165029995219,38.7490816178279,31.6963362030877,106.297396068469,116.031782460228,106.168065256432,59.8500231953778,62.506827561904,73.8168479003056,50.5879079706672,56.0097297665925,64.0873666001123,88.6313598548064,75.8299445521969,97.6468721500146,81.3686998121961,56.4685155025357,59.9743278865108,68.633754373222,65.3736588990443,41.6882436658418,62.7506946655934,101.550699881588,98.4754831487419,87.7254676882579,82.5216307023619,83.0232068566682,39.6540263284812,38.6163414868584,36.1283899998522,60.3143267083055,71.1435836888911,38.2457379844595,41.5323872278129,34.8135256323589,32.9560121570245,36.5007390055477,42.2016722095504,38.6116983628635,39.9617426567626,38.2772319101097,41.3024171579517,34.0524421817572,42.7470800741334,34.9303138911808,20.9220173898839,21.068410784056,24.2698322544865,44.7094515405357,54.5266355870362,50.5285969440057,24.5681039121215,32.0774687718058,35.1435969886663,33.5876587439981,44.1352210477219,39.703081960789,94.8849202464796,69.5258352982427,46.6681826809701,77.4381489283248,89.7562160494231,85.8128074704129,83.1713814333016,68.100086838795,56.1777680527007,65.6156741925522,74.8183693256262,53.000936176551,109.998710845587,30.7983545794363,17.8363667794652,21.3320010945999,71.2255524926894,61.0597275794988,67.2347511869662,63.4862371237973,90.3693213928629,51.9547486726887,72.3433812614787,68.8091980985439,72.6438816356584,72.4975901058115,68.0838614315731,49.2613038012328,230.138514960702,42.6568102913739,45.9997487013935,56.133096931751,41.2973639520936,49.4572758197927,85.7402101603362,32.7914492652933,32.2547928492721,65.1415490781908,92.0180156205468,134.378211742523,103.816375518694,28.6100121263211,30.1950397860293,37.8219599859722,29.3763101124947,28.8958466783273,21.8177446787538,30.3391161936707,82.1843666272053,52.8729625092895,98.0564302722658,38.7213014831112,69.4843165420838,77.9368134029473,56.719570888685,66.7622343012218,45.856600427995,51.3736018342248,43.0090915729155,32.855328083855,61.0057419999943,68.4564010207506,66.6854760581366,75.1841362226582,72.0142375494299,67.9091724718225,80.255033199098,74.637850056935,129.909439652948,148.747090312305,101.162205784831,58.202342082476,62.6184580149527,70.0441419083348,55.6350128625244,53.9133994987886,64.6379202998115,54.6454770163458,41.8506506183406,51.9605773533904,43.9374799268993,51.2202487926777,37.1295147720019,45.321996101853,46.9837246722848,38.9198614405078,27.9685631590289,45.1751248345059,72.031294690468,70.8727518658299,78.4900761969661,80.1216517918513,65.4646703516234,61.9168420593662,63.8224985834778,76.4707016972488,61.214248939242,68.3500662104645,64.8444838704695,57.4984204198926,54.7849084804728,60.2209003798328,73.2707989075213,69.1020218192654,68.8494480459686,70.8340778180319,51.845558409617,76.1655966141475,68.4652279701719,59.2647678073192,52.7392719616306,50.3350604610443,66.0964644212188,65.6472912063979,85.674809228186,52.3893631948535,53.8571646610176,55.9906659838286,50.9178904685142,56.4354553820655,65.4388439078249,65.8824154762356,62.5841975351637,72.7587744948416,60.3826467414889,70.7067800570156,68.0242127389742,69.96434919135,74.8087214386374,63.6825448199645,54.5021910991484,85.8396095320296,62.5785509537379,66.8795637954241,64.5398182793381,53.4344961239392,49.5130773042909,62.8330346102112,53.1230435637864,50.9368786192182,46.0824281420138,53.7471672267621,61.8212235079906,58.4382196669307,51.2690365393526,35.3538694482161,68.355233949646,87.7478853249049,27.1330497079368,26.6070528564301,76.2297496001541,36.3558135174297,55.2139383978449,63.6415153203521,54.9329664218637,56.1576675188497,55.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| ||
|EntrezGene=56529 | |||
|HGNC= | |||
|UniProt=D3YTS1,Q9R0P6,Q6PET3,D3YWT0 | |||
|association_with_transcript=0bp_to_ENSMUST00000120285,ENSMUST00000147813,ENSMUST00000147881,NM_019951,uc009ibn.1,uc009ibo.1_5end | |||
|description=CAGE_peak_1_at_Sec11a_5end | |||
|id=chr7:88092385..88092465,- | |||
|ontology_enrichment_celltype=CL:0000084!2.62e-07!11;CL:0000827!2.62e-07!11;CL:0000542!2.92e-07!13;CL:0000051!2.92e-07!13;CL:0000838!5.21e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.62e-07,11;CL:0000827,2.62e-07,11;CL:0000542,2.92e-07,13;CL:0000051,2.92e-07,13;CL:0000838,5.21e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.26e-07!193;UBERON:0004120!2.26e-07!193;UBERON:0006603!2.26e-07!193;UBERON:0004119!4.64e-07!130;UBERON:0000925!4.64e-07!130;UBERON:0006595!4.64e-07!130 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=91.2848428497326,57.2319668528552,51.4149140510176,34.7833843002855,34.0609096363516,64.9692782299013,68.9157289756801,101.878302195404,90.8087257878251,104.392778739609,96.0532801745083,110.723756685527,107.514058396797,132.092228055105,35.9758542760916,42.3173308844736,34.9780939064073,62.3037776582519,57.8622909816218,55.595044385542,59.6153463958999,78.6384333511012,94.5543236682946,85.4359537716792,73.8697885036287,74.6501553349526,83.1370652587014,90.9288601934452,87.6007963693884,84.4300934695768,143.459640393982,31.1165029995219,38.7490816178279,31.6963362030877,106.297396068469,116.031782460228,106.168065256432,59.8500231953778,62.506827561904,73.8168479003056,50.5879079706672,56.0097297665925,64.0873666001123,88.6313598548064,75.8299445521969,97.6468721500146,81.3686998121961,56.4685155025357,59.9743278865108,68.633754373222,65.3736588990443,41.6882436658418,62.7506946655934,101.550699881588,98.4754831487419,87.7254676882579,82.5216307023619,83.0232068566682,39.6540263284812,38.6163414868584,36.1283899998522,60.3143267083055,71.1435836888911,38.2457379844595,41.5323872278129,34.8135256323589,32.9560121570245,36.5007390055477,42.2016722095504,38.6116983628635,39.9617426567626,38.2772319101097,41.3024171579517,34.0524421817572,42.7470800741334,34.9303138911808,20.9220173898839,21.068410784056,24.2698322544865,44.7094515405357,54.5266355870362,50.5285969440057,24.5681039121215,32.0774687718058,35.1435969886663,33.5876587439981,44.1352210477219,39.703081960789,94.8849202464796,69.5258352982427,46.6681826809701,77.4381489283248,89.7562160494231,85.8128074704129,83.1713814333016,68.100086838795,56.1777680527007,65.6156741925522,74.8183693256262,53.000936176551,109.998710845587,30.7983545794363,17.8363667794652,21.3320010945999,71.2255524926894,61.0597275794988,67.2347511869662,63.4862371237973,90.3693213928629,51.9547486726887,72.3433812614787,68.8091980985439,72.6438816356584,72.4975901058115,68.0838614315731,49.2613038012328,230.138514960702,42.6568102913739,45.9997487013935,56.133096931751,41.2973639520936,49.4572758197927,85.7402101603362,32.7914492652933,32.2547928492721,65.1415490781908,92.0180156205468,134.378211742523,103.816375518694,28.6100121263211,30.1950397860293,37.8219599859722,29.3763101124947,28.8958466783273,21.8177446787538,30.3391161936707,82.1843666272053,52.8729625092895,98.0564302722658,38.7213014831112,69.4843165420838,77.9368134029473,56.719570888685,66.7622343012218,45.856600427995,51.3736018342248,43.0090915729155,32.855328083855,61.0057419999943,68.4564010207506,66.6854760581366,75.1841362226582,72.0142375494299,67.9091724718225,80.255033199098,74.637850056935,129.909439652948,148.747090312305,101.162205784831,58.202342082476,62.6184580149527,70.0441419083348,55.6350128625244,53.9133994987886,64.6379202998115,54.6454770163458,41.8506506183406,51.9605773533904,43.9374799268993,51.2202487926777,37.1295147720019,45.321996101853,46.9837246722848,38.9198614405078,27.9685631590289,45.1751248345059,72.031294690468,70.8727518658299,78.4900761969661,80.1216517918513,65.4646703516234,61.9168420593662,63.8224985834778,76.4707016972488,61.214248939242,68.3500662104645,64.8444838704695,57.4984204198926,54.7849084804728,60.2209003798328,73.2707989075213,69.1020218192654,68.8494480459686,70.8340778180319,51.845558409617,76.1655966141475,68.4652279701719,59.2647678073192,52.7392719616306,50.3350604610443,66.0964644212188,65.6472912063979,85.674809228186,52.3893631948535,53.8571646610176,55.9906659838286,50.9178904685142,56.4354553820655,65.4388439078249,65.8824154762356,62.5841975351637,72.7587744948416,60.3826467414889,70.7067800570156,68.0242127389742,69.96434919135,74.8087214386374,63.6825448199645,54.5021910991484,85.8396095320296,62.5785509537379,66.8795637954241,64.5398182793381,53.4344961239392,49.5130773042909,62.8330346102112,53.1230435637864,50.9368786192182,46.0824281420138,53.7471672267621,61.8212235079906,58.4382196669307,51.2690365393526,35.3538694482161,68.355233949646,87.7478853249049,27.1330497079368,26.6070528564301,76.2297496001541,36.3558135174297,55.2139383978449,63.6415153203521,54.9329664218637,56.1576675188497,55.6996685205985,48.972239826468,53.4350126210861,44.7151462604307,49.4109722433154,25.7057053137446,75.5121253307989,74.2533567292454,76.5568708961808,81.33027062546,63.7176664031822,90.0716160134981,83.1389781653065,77.8938979391859,71.1677561842662,90.0784983475707,81.6633406411579,59.2559979048334,64.1695281092498,75.2167483887242,69.5762816594992,56.7245487865028,111.664190687242,82.6480421603714,78.9087971074802,88.0925213979844,88.3154363538522,90.4329905242498,101.855843752713,99.8645033095886,103.490223256096,118.202295542012,131.655453638812,43.6948570294922,58.9345157440055,49.3359725912315,43.0934161851323,44.6463247306567,51.5921080834836,26.3303928854924,40.6672696298889,56.3436149539597,57.4103034846106,45.7735350521399,42.7852932766809,48.9585290661958,74.6205307673025,78.5127647535721,77.5301853042817,77.3283200592242,60.1038387804157,79.0912727123441,87.0523047023718,80.4989939655704,83.8512244785322,71.2083748911853,64.3870420100367,69.3653246257679,77.6393690017839,121.782505365037,64.8246879486819,67.4319622658344,69.6580244824381,73.6970003823941,83.1789263196588,77.5508616002672,67.4804122213085,54.685841634459,65.3273715772179,79.23959163093,58.4700912703467,53.4058793861621,68.5211227680755,58.237112712457,53.1376165979182,46.5469408735452,57.8162742413481,49.6407206517471,55.2358831632919,57.6518429203923,49.9916651656799,58.0758826388201,51.555218911329,62.4414852245738,61.009742938779,29.2482194863623,29.3021458453765,20.5444731635699,38.613461763738,53.1271383588524,170.040322758771,87.5464763997527,57.4507255931896,116.86630024024,32.7556068717899,32.2227665555024,33.8008352929244,31.9646919159259,22.6077231524312,20.3956352295219,27.0009000092722,29.2708782095743,25.3759749031155,26.9235362110946,32.2778650986789,59.8537310101547,68.6349095131619,59.0749322475954,24.105513702218,29.9664918773523,54.2282015835941,50.2725539662902,54.5562656306086,51.2975339880509,55.2584873760723,56.2106497330507,53.5629422727727,52.2445243623733,56.7462433281459,36.6746142287967,44.7313498147142,55.7507647140108,57.2799402116596,53.5804069289206,51.0875186054269,61.4066289311308,56.5093770175151,50.435206571418,52.7953624130005,52.5456715007311,55.2442478075773,63.3998004565201,49.8401097814313,43.7690971893036,53.8602982283751,45.6075753398859,59.338501259605,55.4673891445758,56.1358237955121,44.7160934508923,54.973927984671,56.5110872147024,61.2122662620299,49.4124778827715,49.1559811515294 | |||
|short_description=p1@Sec11a | |||
}} | |||
Revision as of 14:20, 14 September 2013
| Short description: | p1@Sec11a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sec11a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000120285, ENSMUST00000147813, ENSMUST00000147881, NM_019951, uc009ibn.1, uc009ibo.1_5end |
| EntrezGene: | Sec11a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| T cell | 2.62e-07 | 11 |
| pro-T cell | 2.62e-07 | 11 |
| lymphocyte | 2.92e-07 | 13 |
| common lymphoid progenitor | 2.92e-07 | 13 |
| lymphoid lineage restricted progenitor cell | 5.21e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
