FFCP PHASE1:Mm9::chr7:71898960..71898971,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:71898960..71898971,+|id=chr7:71898960..71898971,+|ontology_enrichment_celltype=CL:0000117!4.29e-19!23;CL:0000337!4.29e-19!23;CL:0000540!1.84e-15!33;CL:0000047!1.84e-15!33;CL:0000031!1.84e-15!33;CL:0000404!1.84e-15!33;CL:0002319!2.35e-12!43;CL:0000221!7.69e-12!44;CL:0000133!7.69e-12!44;CL:0000393!1.38e-11!39;CL:0000211!1.38e-11!39;CL:0000055!3.13e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-32,23;CL:0000337,2.28e-32,23;CL:0000540,5.72e-21,33;CL:0000047,5.72e-21,33;CL:0000031,5.72e-21,33;CL:0000404,5.72e-21,33;CL:0000393,6.00e-17,39;CL:0000211,6.00e-17,39;CL:0002319,6.76e-15,43;CL:0000221,1.92e-14,44;CL:0000133,1.92e-14,44;CL:0002610,2.51e-07,3;CL:0002613,2.76e-07,3;CL:0002321,2.84e-07,70;CL:0002612,6.48e-07,3;CL:0000120,9.84e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.85e-32!73;UBERON:0005743!1.85e-32!73;UBERON:0000073!4.33e-32!75;UBERON:0001016!4.33e-32!75;UBERON:0002346!3.91e-30!71;UBERON:0003075!3.91e-30!71;UBERON:0007284!3.91e-30!71;UBERON:0004121!5.06e-30!102;UBERON:0000924!5.06e-30!102;UBERON:0006601!5.06e-30!102;UBERON:0001049!1.78e-28!52;UBERON:0005068!1.78e-28!52;UBERON:0006241!1.78e-28!52;UBERON:0007135!1.78e-28!52;UBERON:0000033!8.31e-28!63;UBERON:0000955!1.01e-26!50;UBERON:0006238!1.01e-26!50;UBERON:0002616!5.52e-26!49;UBERON:0003056!1.21e-25!49;UBERON:0002020!4.63e-25!34;UBERON:0003080!1.24e-21!40;UBERON:0002780!7.64e-21!39;UBERON:0001890!7.64e-21!39;UBERON:0006240!7.64e-21!39;UBERON:0002791!1.50e-20!29;UBERON:0003528!1.50e-20!29;UBERON:0001893!1.50e-20!29;UBERON:0007811!5.89e-17!86;UBERON:0000956!3.29e-15!21;UBERON:0001869!3.29e-15!21;UBERON:0000203!3.29e-15!21;UBERON:0000153!5.26e-14!94;UBERON:0002619!2.87e-12!17;UBERON:0002021!1.41e-10!10;UBERON:0000411!1.41e-10!10;UBERON:0001950!1.41e-10!10;UBERON:0003076!2.83e-07!12;UBERON:0003057!2.83e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.57e-46,54;UBERON:0002020,2.69e-43,34;UBERON:0001049,8.41e-42,52;UBERON:0005068,8.41e-42,52;UBERON:0006241,8.41e-42,52;UBERON:0007135,8.41e-42,52;UBERON:0001017,2.14e-40,73;UBERON:0001016,4.42e-39,75;UBERON:0002346,1.67e-36,64;UBERON:0003075,1.67e-36,64;UBERON:0007284,1.67e-36,64;UBERON:0003528,3.48e-34,29;UBERON:0002791,3.48e-34,29;UBERON:0001893,3.48e-34,29;UBERON:0004121,2.69e-32,95;UBERON:0000924,2.69e-32,95;UBERON:0006601,2.69e-32,95;UBERON:0002616,1.12e-31,46;UBERON:0010371,5.93e-31,73;UBERON:0000955,7.57e-31,47;UBERON:0006238,7.57e-31,47;UBERON:0003080,1.19e-29,40;UBERON:0002780,3.64e-28,39;UBERON:0001890,3.64e-28,39;UBERON:0006240,3.64e-28,39;UBERON:0003056,7.91e-27,49;UBERON:0010314,8.52e-23,92;UBERON:0000956,9.47e-23,21;UBERON:0001869,9.47e-23,21;UBERON:0000203,9.47e-23,21;UBERON:0002619,2.05e-19,17;UBERON:0002021,5.16e-17,10;UBERON:0000411,5.16e-17,10;UBERON:0001950,5.16e-17,10;UBERON:0000025,1.19e-15,114;UBERON:0004111,4.53e-14,122;UBERON:0002420,2.05e-12,8;UBERON:0007245,2.05e-12,8;UBERON:0010009,2.05e-12,8;UBERON:0010011,2.05e-12,8;UBERON:0000454,2.05e-12,8;UBERON:0003076,5.25e-12,12;UBERON:0003057,5.25e-12,12;UBERON:0002240,8.47e-12,6;UBERON:0005174,8.47e-12,6;UBERON:0001137,8.47e-12,6;UBERON:0000369,2.11e-10,5;UBERON:0002435,2.11e-10,5;UBERON:0000204,2.11e-10,5;UBERON:0010082,2.11e-10,5;UBERON:0011216,2.51e-10,194;UBERON:0001948,3.49e-10,5;UBERON:0002315,3.49e-10,5;UBERON:0000483,9.65e-09,174;UBERON:0000119,1.52e-08,176;UBERON:0004684,2.51e-07,3;UBERON:0002275,2.51e-07,3;UBERON:0002257,6.48e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0.384218305321555,1.76272340924412,2.02508907497536,0.841299845405528,3.42781181284564,1.76694832761291,0.857435594504678,2.1086003624012,6.43453150627015,2.20231761998777,6.2566795661742,6.14426133024974,2.37395317914349,5.39777097254217,4.68822033501084,3.90856198601933,0,5.04234217663473,3.83017161115768,3.70166370077668,2.05039390407831,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.92780797011547,2.09446706813455,0,0,0,0,1.79748767285787,1.37250180845588,2.89005009859588,2.25971616249959,4.09144731728529,1.0389402227978,1.29793010454206,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.90422890701429,1.42876648217788,1.2811372028485,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,3.60166143327496,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0,0.404810701674894,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.7770221114048,6.90487854760765,7.44764167471216,8.07709957015332,1.37016503954128,3.7769694869485,0.675022500231806,3.60256962579376,4.07828168085784,3.62432218226274,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.347652977834566,0.38581844092741,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0|short_description=p@chr7:71898960..71898971,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:71898960..71898971,+ | |||
|id=chr7:71898960..71898971,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.29e-19!23;CL:0000337!4.29e-19!23;CL:0000540!1.84e-15!33;CL:0000047!1.84e-15!33;CL:0000031!1.84e-15!33;CL:0000404!1.84e-15!33;CL:0002319!2.35e-12!43;CL:0000221!7.69e-12!44;CL:0000133!7.69e-12!44;CL:0000393!1.38e-11!39;CL:0000211!1.38e-11!39;CL:0000055!3.13e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-32,23;CL:0000337,2.28e-32,23;CL:0000540,5.72e-21,33;CL:0000047,5.72e-21,33;CL:0000031,5.72e-21,33;CL:0000404,5.72e-21,33;CL:0000393,6.00e-17,39;CL:0000211,6.00e-17,39;CL:0002319,6.76e-15,43;CL:0000221,1.92e-14,44;CL:0000133,1.92e-14,44;CL:0002610,2.51e-07,3;CL:0002613,2.76e-07,3;CL:0002321,2.84e-07,70;CL:0002612,6.48e-07,3;CL:0000120,9.84e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-32!73;UBERON:0005743!1.85e-32!73;UBERON:0000073!4.33e-32!75;UBERON:0001016!4.33e-32!75;UBERON:0002346!3.91e-30!71;UBERON:0003075!3.91e-30!71;UBERON:0007284!3.91e-30!71;UBERON:0004121!5.06e-30!102;UBERON:0000924!5.06e-30!102;UBERON:0006601!5.06e-30!102;UBERON:0001049!1.78e-28!52;UBERON:0005068!1.78e-28!52;UBERON:0006241!1.78e-28!52;UBERON:0007135!1.78e-28!52;UBERON:0000033!8.31e-28!63;UBERON:0000955!1.01e-26!50;UBERON:0006238!1.01e-26!50;UBERON:0002616!5.52e-26!49;UBERON:0003056!1.21e-25!49;UBERON:0002020!4.63e-25!34;UBERON:0003080!1.24e-21!40;UBERON:0002780!7.64e-21!39;UBERON:0001890!7.64e-21!39;UBERON:0006240!7.64e-21!39;UBERON:0002791!1.50e-20!29;UBERON:0003528!1.50e-20!29;UBERON:0001893!1.50e-20!29;UBERON:0007811!5.89e-17!86;UBERON:0000956!3.29e-15!21;UBERON:0001869!3.29e-15!21;UBERON:0000203!3.29e-15!21;UBERON:0000153!5.26e-14!94;UBERON:0002619!2.87e-12!17;UBERON:0002021!1.41e-10!10;UBERON:0000411!1.41e-10!10;UBERON:0001950!1.41e-10!10;UBERON:0003076!2.83e-07!12;UBERON:0003057!2.83e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.57e-46,54;UBERON:0002020,2.69e-43,34;UBERON:0001049,8.41e-42,52;UBERON:0005068,8.41e-42,52;UBERON:0006241,8.41e-42,52;UBERON:0007135,8.41e-42,52;UBERON:0001017,2.14e-40,73;UBERON:0001016,4.42e-39,75;UBERON:0002346,1.67e-36,64;UBERON:0003075,1.67e-36,64;UBERON:0007284,1.67e-36,64;UBERON:0003528,3.48e-34,29;UBERON:0002791,3.48e-34,29;UBERON:0001893,3.48e-34,29;UBERON:0004121,2.69e-32,95;UBERON:0000924,2.69e-32,95;UBERON:0006601,2.69e-32,95;UBERON:0002616,1.12e-31,46;UBERON:0010371,5.93e-31,73;UBERON:0000955,7.57e-31,47;UBERON:0006238,7.57e-31,47;UBERON:0003080,1.19e-29,40;UBERON:0002780,3.64e-28,39;UBERON:0001890,3.64e-28,39;UBERON:0006240,3.64e-28,39;UBERON:0003056,7.91e-27,49;UBERON:0010314,8.52e-23,92;UBERON:0000956,9.47e-23,21;UBERON:0001869,9.47e-23,21;UBERON:0000203,9.47e-23,21;UBERON:0002619,2.05e-19,17;UBERON:0002021,5.16e-17,10;UBERON:0000411,5.16e-17,10;UBERON:0001950,5.16e-17,10;UBERON:0000025,1.19e-15,114;UBERON:0004111,4.53e-14,122;UBERON:0002420,2.05e-12,8;UBERON:0007245,2.05e-12,8;UBERON:0010009,2.05e-12,8;UBERON:0010011,2.05e-12,8;UBERON:0000454,2.05e-12,8;UBERON:0003076,5.25e-12,12;UBERON:0003057,5.25e-12,12;UBERON:0002240,8.47e-12,6;UBERON:0005174,8.47e-12,6;UBERON:0001137,8.47e-12,6;UBERON:0000369,2.11e-10,5;UBERON:0002435,2.11e-10,5;UBERON:0000204,2.11e-10,5;UBERON:0010082,2.11e-10,5;UBERON:0011216,2.51e-10,194;UBERON:0001948,3.49e-10,5;UBERON:0002315,3.49e-10,5;UBERON:0000483,9.65e-09,174;UBERON:0000119,1.52e-08,176;UBERON:0004684,2.51e-07,3;UBERON:0002275,2.51e-07,3;UBERON:0002257,6.48e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0.384218305321555,1.76272340924412,2.02508907497536,0.841299845405528,3.42781181284564,1.76694832761291,0.857435594504678,2.1086003624012,6.43453150627015,2.20231761998777,6.2566795661742,6.14426133024974,2.37395317914349,5.39777097254217,4.68822033501084,3.90856198601933,0,5.04234217663473,3.83017161115768,3.70166370077668,2.05039390407831,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.92780797011547,2.09446706813455,0,0,0,0,1.79748767285787,1.37250180845588,2.89005009859588,2.25971616249959,4.09144731728529,1.0389402227978,1.29793010454206,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.90422890701429,1.42876648217788,1.2811372028485,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,3.60166143327496,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0.430846795465598,0.238968797952552,0.891194696329576,0,0.404810701674894,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.7770221114048,6.90487854760765,7.44764167471216,8.07709957015332,1.37016503954128,3.7769694869485,0.675022500231806,3.60256962579376,4.07828168085784,3.62432218226274,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.347652977834566,0.38581844092741,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr7:71898960..71898971,+ | |||
}} |
Revision as of 14:04, 14 September 2013
Short description: | p@chr7:71898960..71898971, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:71898960..71898971, + |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.28e-32 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-32 | 23 |
neuron | 5.72e-21 | 33 |
neuronal stem cell | 5.72e-21 | 33 |
neuroblast | 5.72e-21 | 33 |
electrically signaling cell | 5.72e-21 | 33 |
electrically responsive cell | 6.00e-17 | 39 |
electrically active cell | 6.00e-17 | 39 |
neural cell | 6.76e-15 | 43 |
ectodermal cell | 1.92e-14 | 44 |
neurectodermal cell | 1.92e-14 | 44 |
raphe nuclei neuron | 2.51e-07 | 3 |
striatum neuron | 2.76e-07 | 3 |
embryonic cell | 2.84e-07 | 70 |
neuron of the ventral spinal cord | 6.48e-07 | 3 |
granule cell | 9.84e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.