FFCP PHASE1:Mm9::chr7:53176051..53176064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13732|HGNC=|MCL_coexpression_id=3630|UniProt=Q3UIF8,O35912|association_with_transcript=154bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end|description=CAGE_peak_6_at_Emp3_5end|id=chr7:53176051..53176064,-|ontology_enrichment_celltype=CL:0000219!3.02e-09!54;CL:0000333!3.47e-09!10;CL:0000095!3.47e-09!10;CL:0000243!3.47e-09!10;CL:0000123!3.47e-09!10;CL:0000125!3.47e-09!10;CL:0000030!3.47e-09!10;CL:0000339!3.47e-09!10;CL:0000144!9.32e-09!121;CL:0000012!9.32e-09!121;CL:0000548!5.02e-08!115;CL:0000004!5.02e-08!115;CL:0000255!5.02e-08!115;CL:0002371!2.09e-07!118;CL:0002453!3.01e-07!8|ontology_enrichment_celltype_v019_2=CL:0000219,3.35e-13,54;CL:0000333,3.69e-12,10;CL:0000095,3.69e-12,10;CL:0000243,3.69e-12,10;CL:0000123,3.69e-12,10;CL:0000125,3.69e-12,10;CL:0000030,3.69e-12,10;CL:0000339,3.69e-12,10;CL:0000034,4.08e-11,97;CL:0000723,3.04e-09,91;CL:0000048,3.04e-09,91;CL:0000107,7.24e-09,9;CL:0002453,2.05e-08,8;CL:0002321,6.40e-08,70;CL:0002320,8.05e-08,46;CL:0000134,8.05e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.46e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.45e-12,11;UBERON:0002410,7.24e-09,9;UBERON:0002369,1.65e-08,7;UBERON:0006858,1.65e-08,7;UBERON:0002384,8.05e-08,46|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,3.66050677594334,3.27690336850791,0.34243593645101,1.7549874978974,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,4.77221555620372,0.782391344348039,0.65407546914134,2.63623419281366,1.55543919259427,2.65974201088189,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0.515672092277442,0,0,0,5.08266798103698,6.22506357277798,1.3498495759221,2.96659908770092,2.8419204597844,5.39280198933128,4.2264013585371,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,0,18.1742863999642,12.1670211771925,0.579728977403356,0,0,0,0,0,0,11.5892619353079,9.35229616570328,7.0667914902068,0,0,0,0,3.46385665617943,4.05375784760158,1.51657333504435,0.11418387971906,0.258937883647172,1.92974780784272,1.56136794089522,1.82679286987285,2.7673859670727,1.65794904607885,0.823120949949934,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,4.31334448221313,4.19931911695385,2.41433431438823,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,6.39346286969034,0,0,1.56175497718655,0.430846795465598,2.38968797952552,3.11918143715352,1.69845918473299,2.42886421004937,1.16902343164525,1.58115111178609,0.963963949265421,0.425820255624806,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.484393280087717,0.603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,3.56954702987096,3.63873776041511,1.65839968565309,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0.503653849092235,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,1.72159498861959,0.441182838239031,0.463735671240843|short_description=p6@Emp3}} | ||
|EntrezGene=13732 | |||
|HGNC= | |||
|MCL_coexpression_id=3630 | |||
|UniProt=Q3UIF8,O35912 | |||
|association_with_transcript=154bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end | |||
|description=CAGE_peak_6_at_Emp3_5end | |||
|id=chr7:53176051..53176064,- | |||
|ontology_enrichment_celltype=CL:0000219!3.02e-09!54;CL:0000333!3.47e-09!10;CL:0000095!3.47e-09!10;CL:0000243!3.47e-09!10;CL:0000123!3.47e-09!10;CL:0000125!3.47e-09!10;CL:0000030!3.47e-09!10;CL:0000339!3.47e-09!10;CL:0000144!9.32e-09!121;CL:0000012!9.32e-09!121;CL:0000548!5.02e-08!115;CL:0000004!5.02e-08!115;CL:0000255!5.02e-08!115;CL:0002371!2.09e-07!118;CL:0002453!3.01e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.35e-13,54;CL:0000333,3.69e-12,10;CL:0000095,3.69e-12,10;CL:0000243,3.69e-12,10;CL:0000123,3.69e-12,10;CL:0000125,3.69e-12,10;CL:0000030,3.69e-12,10;CL:0000339,3.69e-12,10;CL:0000034,4.08e-11,97;CL:0000723,3.04e-09,91;CL:0000048,3.04e-09,91;CL:0000107,7.24e-09,9;CL:0002453,2.05e-08,8;CL:0002321,6.40e-08,70;CL:0002320,8.05e-08,46;CL:0000134,8.05e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.46e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.45e-12,11;UBERON:0002410,7.24e-09,9;UBERON:0002369,1.65e-08,7;UBERON:0006858,1.65e-08,7;UBERON:0002384,8.05e-08,46 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,3.66050677594334,3.27690336850791,0.34243593645101,1.7549874978974,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,4.77221555620372,0.782391344348039,0.65407546914134,2.63623419281366,1.55543919259427,2.65974201088189,2.87505128729943,0,0,0,2.31533492432352,0.85960031981627,0.515672092277442,0,0,0,5.08266798103698,6.22506357277798,1.3498495759221,2.96659908770092,2.8419204597844,5.39280198933128,4.2264013585371,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,0,18.1742863999642,12.1670211771925,0.579728977403356,0,0,0,0,0,0,11.5892619353079,9.35229616570328,7.0667914902068,0,0,0,0,3.46385665617943,4.05375784760158,1.51657333504435,0.11418387971906,0.258937883647172,1.92974780784272,1.56136794089522,1.82679286987285,2.7673859670727,1.65794904607885,0.823120949949934,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,4.31334448221313,4.19931911695385,2.41433431438823,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,6.39346286969034,0,0,1.56175497718655,0.430846795465598,2.38968797952552,3.11918143715352,1.69845918473299,2.42886421004937,1.16902343164525,1.58115111178609,0.963963949265421,0.425820255624806,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.484393280087717,0.603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,3.56954702987096,3.63873776041511,1.65839968565309,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0.503653849092235,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,1.72159498861959,0.441182838239031,0.463735671240843 | |||
|short_description=p6@Emp3 | |||
}} |
Revision as of 13:49, 14 September 2013
Short description: | p6@Emp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Emp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3630 |
Association with transcript: | 154bp_to_ENSMUST00000164119, NM_001146346, uc009gxv.2_5end |
EntrezGene: | Emp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.35e-13 | 54 |
migratory neural crest cell | 3.69e-12 | 10 |
neuron associated cell | 3.69e-12 | 10 |
glial cell (sensu Vertebrata) | 3.69e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 3.69e-12 | 10 |
glial cell | 3.69e-12 | 10 |
glioblast | 3.69e-12 | 10 |
glioblast (sensu Vertebrata) | 3.69e-12 | 10 |
stem cell | 4.08e-11 | 97 |
somatic stem cell | 3.04e-09 | 91 |
multi fate stem cell | 3.04e-09 | 91 |
autonomic neuron | 7.24e-09 | 9 |
oligodendrocyte precursor cell | 2.05e-08 | 8 |
embryonic cell | 6.40e-08 | 70 |
connective tissue cell | 8.05e-08 | 46 |
mesenchymal cell | 8.05e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.45e-12 | 11 |
autonomic nervous system | 7.24e-09 | 9 |
adrenal gland | 1.65e-08 | 7 |
adrenal/interrenal gland | 1.65e-08 | 7 |
connective tissue | 8.05e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.