FFCP PHASE1:Mm9::chr7:52430527..52430533,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52430527..52430533,+|id=chr7:52430527..52430533,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!2.32e-15!21;UBERON:0001869!2.32e-15!21;UBERON:0000203!2.32e-15!21;UBERON:0002619!7.86e-15!17;UBERON:0002616!7.80e-14!49;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0002021!1.24e-13!10;UBERON:0000411!1.24e-13!10;UBERON:0001950!1.24e-13!10;UBERON:0000955!1.59e-13!50;UBERON:0006238!1.59e-13!50;UBERON:0000033!2.43e-12!63;UBERON:0002020!1.77e-11!34;UBERON:0001049!8.11e-11!52;UBERON:0005068!8.11e-11!52;UBERON:0006241!8.11e-11!52;UBERON:0007135!8.11e-11!52;UBERON:0002780!7.40e-10!39;UBERON:0001890!7.40e-10!39;UBERON:0006240!7.40e-10!39;UBERON:0003080!1.40e-09!40;UBERON:0003056!1.89e-09!49;UBERON:0002346!4.70e-09!71;UBERON:0003075!4.70e-09!71;UBERON:0007284!4.70e-09!71;UBERON:0001017!1.02e-08!73;UBERON:0005743!1.02e-08!73;UBERON:0007811!1.56e-08!86;UBERON:0000073!1.95e-08!75;UBERON:0001016!1.95e-08!75;UBERON:0000153!1.22e-07!94;UBERON:0004121!6.90e-07!102;UBERON:0000924!6.90e-07!102;UBERON:0006601!6.90e-07!102;UBERON:0001851!9.48e-07!1;UBERON:0005889!9.48e-07!1;UBERON:0000470!9.48e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81727425670947,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:52430527..52430533,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:52430527..52430533,+ | |||
|id=chr7:52430527..52430533,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!2.32e-15!21;UBERON:0001869!2.32e-15!21;UBERON:0000203!2.32e-15!21;UBERON:0002619!7.86e-15!17;UBERON:0002616!7.80e-14!49;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0002021!1.24e-13!10;UBERON:0000411!1.24e-13!10;UBERON:0001950!1.24e-13!10;UBERON:0000955!1.59e-13!50;UBERON:0006238!1.59e-13!50;UBERON:0000033!2.43e-12!63;UBERON:0002020!1.77e-11!34;UBERON:0001049!8.11e-11!52;UBERON:0005068!8.11e-11!52;UBERON:0006241!8.11e-11!52;UBERON:0007135!8.11e-11!52;UBERON:0002780!7.40e-10!39;UBERON:0001890!7.40e-10!39;UBERON:0006240!7.40e-10!39;UBERON:0003080!1.40e-09!40;UBERON:0003056!1.89e-09!49;UBERON:0002346!4.70e-09!71;UBERON:0003075!4.70e-09!71;UBERON:0007284!4.70e-09!71;UBERON:0001017!1.02e-08!73;UBERON:0005743!1.02e-08!73;UBERON:0007811!1.56e-08!86;UBERON:0000073!1.95e-08!75;UBERON:0001016!1.95e-08!75;UBERON:0000153!1.22e-07!94;UBERON:0004121!6.90e-07!102;UBERON:0000924!6.90e-07!102;UBERON:0006601!6.90e-07!102;UBERON:0001851!9.48e-07!1;UBERON:0005889!9.48e-07!1;UBERON:0000470!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81727425670947,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:52430527..52430533,+ | |||
}} |
Revision as of 13:44, 14 September 2013
Short description: | p@chr7:52430527..52430533, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52430527..52430533, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.52e-23 | 4 |
regional part of metencephalon | 6.52e-23 | 4 |
metencephalon | 6.52e-23 | 4 |
future metencephalon | 6.52e-23 | 4 |
rhombic lip | 6.52e-23 | 4 |
segmental subdivision of hindbrain | 8.02e-16 | 6 |
segmental subdivision of nervous system | 8.02e-16 | 6 |
hindbrain | 8.02e-16 | 6 |
presumptive hindbrain | 8.02e-16 | 6 |
posterior neural tube | 1.13e-08 | 12 |
chordal neural plate | 1.13e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.