FFCP PHASE1:Mm9::chr7:51853745..51853759,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:51853745..51853759,+|id=chr7:51853745..51853759,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.12e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.09e-10!6;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0000033!2.40e-09!63;UBERON:0002616!3.47e-09!49;UBERON:0001017!3.65e-09!73;UBERON:0005743!3.65e-09!73;UBERON:0000073!7.62e-09!75;UBERON:0001016!7.62e-09!75;UBERON:0001049!1.13e-08!52;UBERON:0005068!1.13e-08!52;UBERON:0006241!1.13e-08!52;UBERON:0007135!1.13e-08!52;UBERON:0001896!1.50e-08!2;UBERON:0005290!1.50e-08!2;UBERON:0010096!1.50e-08!2;UBERON:0003076!4.71e-08!12;UBERON:0003057!4.71e-08!12;UBERON:0002346!4.95e-08!71;UBERON:0003075!4.95e-08!71;UBERON:0007284!4.95e-08!71;UBERON:0004121!1.03e-07!102;UBERON:0000924!1.03e-07!102;UBERON:0006601!1.03e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.12e-15,3;UBERON:0009663,1.12e-15,3;UBERON:0009661,1.12e-15,3;UBERON:0000125,1.12e-15,3;UBERON:0002308,1.12e-15,3;UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0002950,4.02e-12,4;UBERON:0001891,4.02e-12,4;UBERON:0009616,4.02e-12,4;UBERON:0010286,4.02e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6;UBERON:0002420,9.78e-07,8;UBERON:0007245,9.78e-07,8;UBERON:0010009,9.78e-07,8;UBERON:0010011,9.78e-07,8;UBERON:0000454,9.78e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,1.11673199600552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,9.63454851341893,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:51853745..51853759,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:51853745..51853759,+ | |||
|id=chr7:51853745..51853759,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.12e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.09e-10!6;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0000033!2.40e-09!63;UBERON:0002616!3.47e-09!49;UBERON:0001017!3.65e-09!73;UBERON:0005743!3.65e-09!73;UBERON:0000073!7.62e-09!75;UBERON:0001016!7.62e-09!75;UBERON:0001049!1.13e-08!52;UBERON:0005068!1.13e-08!52;UBERON:0006241!1.13e-08!52;UBERON:0007135!1.13e-08!52;UBERON:0001896!1.50e-08!2;UBERON:0005290!1.50e-08!2;UBERON:0010096!1.50e-08!2;UBERON:0003076!4.71e-08!12;UBERON:0003057!4.71e-08!12;UBERON:0002346!4.95e-08!71;UBERON:0003075!4.95e-08!71;UBERON:0007284!4.95e-08!71;UBERON:0004121!1.03e-07!102;UBERON:0000924!1.03e-07!102;UBERON:0006601!1.03e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.12e-15,3;UBERON:0009663,1.12e-15,3;UBERON:0009661,1.12e-15,3;UBERON:0000125,1.12e-15,3;UBERON:0002308,1.12e-15,3;UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0002950,4.02e-12,4;UBERON:0001891,4.02e-12,4;UBERON:0009616,4.02e-12,4;UBERON:0010286,4.02e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6;UBERON:0002420,9.78e-07,8;UBERON:0007245,9.78e-07,8;UBERON:0010009,9.78e-07,8;UBERON:0010011,9.78e-07,8;UBERON:0000454,9.78e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,1.11673199600552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,9.63454851341893,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:51853745..51853759,+ | |||
}} |
Revision as of 13:41, 14 September 2013
Short description: | p@chr7:51853745..51853759, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:51853745..51853759, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.12e-15 | 3 |
telencephalic nucleus | 1.12e-15 | 3 |
midbrain nucleus | 1.12e-15 | 3 |
neural nucleus | 1.12e-15 | 3 |
nucleus of brain | 1.12e-15 | 3 |
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
regional part of midbrain | 4.02e-12 | 4 |
midbrain | 4.02e-12 | 4 |
presumptive midbrain | 4.02e-12 | 4 |
midbrain neural tube | 4.02e-12 | 4 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |
basal ganglion | 9.78e-07 | 8 |
nuclear complex of neuraxis | 9.78e-07 | 8 |
aggregate regional part of brain | 9.78e-07 | 8 |
collection of basal ganglia | 9.78e-07 | 8 |
cerebral subcortex | 9.78e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.