FFCP PHASE1:Mm9::chr7:3390522..3390572,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=60|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:3390522..3390572,+|id=chr7:3390522..3390572,+|ontology_enrichment_celltype=CL:0002319!2.78e-13!43;CL:0000221!4.41e-13!44;CL:0000133!4.41e-13!44;CL:0000117!7.57e-13!23;CL:0000337!7.57e-13!23;CL:0000540!2.38e-12!33;CL:0000047!2.38e-12!33;CL:0000031!2.38e-12!33;CL:0000404!2.38e-12!33;CL:0000055!1.14e-11!50;CL:0000393!3.36e-11!39;CL:0000211!3.36e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-15,23;CL:0000337,3.34e-15,23;CL:0002319,8.97e-15,43;CL:0000221,4.24e-14,44;CL:0000133,4.24e-14,44;CL:0000540,2.55e-13,33;CL:0000047,2.55e-13,33;CL:0000031,2.55e-13,33;CL:0000404,2.55e-13,33;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.01e-32!73;UBERON:0005743!1.01e-32!73;UBERON:0000073!3.52e-31!75;UBERON:0001016!3.52e-31!75;UBERON:0002346!5.25e-29!71;UBERON:0003075!5.25e-29!71;UBERON:0007284!5.25e-29!71;UBERON:0001049!3.31e-26!52;UBERON:0005068!3.31e-26!52;UBERON:0006241!3.31e-26!52;UBERON:0007135!3.31e-26!52;UBERON:0004121!5.60e-26!102;UBERON:0000924!5.60e-26!102;UBERON:0006601!5.60e-26!102;UBERON:0000955!6.07e-25!50;UBERON:0006238!6.07e-25!50;UBERON:0000033!2.04e-24!63;UBERON:0002616!3.29e-24!49;UBERON:0003056!7.61e-23!49;UBERON:0003080!2.56e-21!40;UBERON:0002780!1.41e-20!39;UBERON:0001890!1.41e-20!39;UBERON:0006240!1.41e-20!39;UBERON:0002020!5.14e-20!34;UBERON:0002791!3.13e-17!29;UBERON:0003528!3.13e-17!29;UBERON:0001893!3.13e-17!29;UBERON:0000153!3.39e-13!94;UBERON:0000956!2.10e-12!21;UBERON:0001869!2.10e-12!21;UBERON:0000203!2.10e-12!21;UBERON:0007811!2.32e-12!86;UBERON:0002619!1.98e-10!17;UBERON:0002021!4.99e-07!10;UBERON:0000411!4.99e-07!10;UBERON:0001950!4.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.01e-38,73;UBERON:0001016,3.51e-36,75;UBERON:0002346,8.79e-34,64;UBERON:0003075,8.79e-34,64;UBERON:0007284,8.79e-34,64;UBERON:0000073,5.65e-33,54;UBERON:0001049,1.01e-31,52;UBERON:0005068,1.01e-31,52;UBERON:0006241,1.01e-31,52;UBERON:0007135,1.01e-31,52;UBERON:0004121,2.13e-30,95;UBERON:0000924,2.13e-30,95;UBERON:0006601,2.13e-30,95;UBERON:0000955,3.33e-28,47;UBERON:0006238,3.33e-28,47;UBERON:0002616,2.51e-27,46;UBERON:0010371,4.10e-27,73;UBERON:0003056,5.61e-27,49;UBERON:0003080,1.87e-25,40;UBERON:0002780,1.48e-24,39;UBERON:0001890,1.48e-24,39;UBERON:0006240,1.48e-24,39;UBERON:0002020,7.10e-24,34;UBERON:0010314,6.29e-23,92;UBERON:0003528,1.66e-20,29;UBERON:0002791,1.66e-20,29;UBERON:0001893,1.66e-20,29;UBERON:0000956,1.15e-14,21;UBERON:0001869,1.15e-14,21;UBERON:0000203,1.15e-14,21;UBERON:0002619,2.80e-12,17;UBERON:0002021,3.56e-08,10;UBERON:0000411,3.56e-08,10;UBERON:0001950,3.56e-08,10;UBERON:0002420,5.15e-07,8;UBERON:0007245,5.15e-07,8;UBERON:0010009,5.15e-07,8;UBERON:0010011,5.15e-07,8;UBERON:0000454,5.15e-07,8|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,7.39876624314307,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,8.50298109883741,13.4008571468028,8.1660557611199,2.65974201088189,14.3752564364972,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,19.2200637816618,15.869729378161,15.8457850876545,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,7.49000276296012,16.1371688235053,9.02099627083756,7.42532660824299,7.57169860864975,8.56952953211411,8.83474163806454,11.2691535277758,9.58454710182364,3.67687514644008,12.1127469099328,8.42736431362239,8.60196586234964,20.9699197491008,22.6889356133976,20.3156214517136,7.53794097303729,10.1297269805702,8.40390362772456,14.7314292736834,12.1015928679237,16.4031512326265,0,0.226714680320357,0,0,0,0.539703191637817,0,0,0.702222100658759,0.511290967734173,1.03914401841148,0.35333957451034,0.563373679106722,1.28326477414318,5.09610479413291,0,0,0,0,0.79928715803342,0.517875767294343,5.93768556259299,3.29622120855658,3.65358573974569,1.15307748628029,1.20578112442098,1.17588707135705,1.75933227861546,0,0,0,0,0,0,0,5.27005434620785,5.65506108396329,0.255457055208591,0,0,0,22.3188052713186,25.1625331550245,18.4711897605911,28.5071885115333,20.9686675010871,19.7398642331582,18.0087802005211,0.305518091550949,0,0,0.210441855886474,4.94457683258274,2.75882525320168,5.22180176435513,8.28876498096433,4.62648194229029,5.38077625196369,3.74806898238915,1.55222022443409,5.6047678162539,3.40390944302075,4.57472922826267,0.657587197282725,1.39023624612799,0.696504333044333,0.61734640922383,1.99034266818493,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0.946978942340841,0,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0,36.5904510501581,21.8157778244083,0,0,4.26576501070468,1.16118335930219,1.67527699718721,0.403367049246685,1.11189021922435,0.570676878337677,0,0.164698954724011,0.251335208800269,0.5968694161234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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:3390522..3390572,+ | |||
|id=chr7:3390522..3390572,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.78e-13!43;CL:0000221!4.41e-13!44;CL:0000133!4.41e-13!44;CL:0000117!7.57e-13!23;CL:0000337!7.57e-13!23;CL:0000540!2.38e-12!33;CL:0000047!2.38e-12!33;CL:0000031!2.38e-12!33;CL:0000404!2.38e-12!33;CL:0000055!1.14e-11!50;CL:0000393!3.36e-11!39;CL:0000211!3.36e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-15,23;CL:0000337,3.34e-15,23;CL:0002319,8.97e-15,43;CL:0000221,4.24e-14,44;CL:0000133,4.24e-14,44;CL:0000540,2.55e-13,33;CL:0000047,2.55e-13,33;CL:0000031,2.55e-13,33;CL:0000404,2.55e-13,33;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-32!73;UBERON:0005743!1.01e-32!73;UBERON:0000073!3.52e-31!75;UBERON:0001016!3.52e-31!75;UBERON:0002346!5.25e-29!71;UBERON:0003075!5.25e-29!71;UBERON:0007284!5.25e-29!71;UBERON:0001049!3.31e-26!52;UBERON:0005068!3.31e-26!52;UBERON:0006241!3.31e-26!52;UBERON:0007135!3.31e-26!52;UBERON:0004121!5.60e-26!102;UBERON:0000924!5.60e-26!102;UBERON:0006601!5.60e-26!102;UBERON:0000955!6.07e-25!50;UBERON:0006238!6.07e-25!50;UBERON:0000033!2.04e-24!63;UBERON:0002616!3.29e-24!49;UBERON:0003056!7.61e-23!49;UBERON:0003080!2.56e-21!40;UBERON:0002780!1.41e-20!39;UBERON:0001890!1.41e-20!39;UBERON:0006240!1.41e-20!39;UBERON:0002020!5.14e-20!34;UBERON:0002791!3.13e-17!29;UBERON:0003528!3.13e-17!29;UBERON:0001893!3.13e-17!29;UBERON:0000153!3.39e-13!94;UBERON:0000956!2.10e-12!21;UBERON:0001869!2.10e-12!21;UBERON:0000203!2.10e-12!21;UBERON:0007811!2.32e-12!86;UBERON:0002619!1.98e-10!17;UBERON:0002021!4.99e-07!10;UBERON:0000411!4.99e-07!10;UBERON:0001950!4.99e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.01e-38,73;UBERON:0001016,3.51e-36,75;UBERON:0002346,8.79e-34,64;UBERON:0003075,8.79e-34,64;UBERON:0007284,8.79e-34,64;UBERON:0000073,5.65e-33,54;UBERON:0001049,1.01e-31,52;UBERON:0005068,1.01e-31,52;UBERON:0006241,1.01e-31,52;UBERON:0007135,1.01e-31,52;UBERON:0004121,2.13e-30,95;UBERON:0000924,2.13e-30,95;UBERON:0006601,2.13e-30,95;UBERON:0000955,3.33e-28,47;UBERON:0006238,3.33e-28,47;UBERON:0002616,2.51e-27,46;UBERON:0010371,4.10e-27,73;UBERON:0003056,5.61e-27,49;UBERON:0003080,1.87e-25,40;UBERON:0002780,1.48e-24,39;UBERON:0001890,1.48e-24,39;UBERON:0006240,1.48e-24,39;UBERON:0002020,7.10e-24,34;UBERON:0010314,6.29e-23,92;UBERON:0003528,1.66e-20,29;UBERON:0002791,1.66e-20,29;UBERON:0001893,1.66e-20,29;UBERON:0000956,1.15e-14,21;UBERON:0001869,1.15e-14,21;UBERON:0000203,1.15e-14,21;UBERON:0002619,2.80e-12,17;UBERON:0002021,3.56e-08,10;UBERON:0000411,3.56e-08,10;UBERON:0001950,3.56e-08,10;UBERON:0002420,5.15e-07,8;UBERON:0007245,5.15e-07,8;UBERON:0010009,5.15e-07,8;UBERON:0010011,5.15e-07,8;UBERON:0000454,5.15e-07,8 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,7.39876624314307,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,8.50298109883741,13.4008571468028,8.1660557611199,2.65974201088189,14.3752564364972,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,19.2200637816618,15.869729378161,15.8457850876545,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,7.49000276296012,16.1371688235053,9.02099627083756,7.42532660824299,7.57169860864975,8.56952953211411,8.83474163806454,11.2691535277758,9.58454710182364,3.67687514644008,12.1127469099328,8.42736431362239,8.60196586234964,20.9699197491008,22.6889356133976,20.3156214517136,7.53794097303729,10.1297269805702,8.40390362772456,14.7314292736834,12.1015928679237,16.4031512326265,0,0.226714680320357,0,0,0,0.539703191637817,0,0,0.702222100658759,0.511290967734173,1.03914401841148,0.35333957451034,0.563373679106722,1.28326477414318,5.09610479413291,0,0,0,0,0.79928715803342,0.517875767294343,5.93768556259299,3.29622120855658,3.65358573974569,1.15307748628029,1.20578112442098,1.17588707135705,1.75933227861546,0,0,0,0,0,0,0,5.27005434620785,5.65506108396329,0.255457055208591,0,0,0,22.3188052713186,25.1625331550245,18.4711897605911,28.5071885115333,20.9686675010871,19.7398642331582,18.0087802005211,0.305518091550949,0,0,0.210441855886474,4.94457683258274,2.75882525320168,5.22180176435513,8.28876498096433,4.62648194229029,5.38077625196369,3.74806898238915,1.55222022443409,5.6047678162539,3.40390944302075,4.57472922826267,0.657587197282725,1.39023624612799,0.696504333044333,0.61734640922383,1.99034266818493,0,0,0,1.24275463521301,0.469052119962192,0.180062061461015,0.946978942340841,0,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0,36.5904510501581,21.8157778244083,0,0,4.26576501070468,1.16118335930219,1.67527699718721,0.403367049246685,1.11189021922435,0.570676878337677,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,1.13800740571849,1.25673363870702,0,0.814605311381257,0.581857461502877,0.420814919341911,0.632365371242573,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,1.70542270593436,3.42226450528254,0.678980343100753,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,13.6468001489623,10.0802050469295,0.819674726883377,0,1.89304931649754,2.73307121007647,2.58508077279359,0.716906393857656,1.33679204449436,0.849229592366497,2.83367491172426,1.16902343164525,1.97643888973262,20.2432429345738,0.709700426041343,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,1.209294227859,0.754420319023592,0.885905678642318,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,12.5962654128902,3.96134406868882,4.65691261617916,4.28674070063185,3.54680467284547,2.49716344642899,4.44282355625727,5.17590413494819,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,14.2777482548092,0,0.412773735926445,0.370389054739423,0,0,0,0.169978429993855,0.139951452323658,0,0,2.84702394223022,1.21991680276109,0.432021363287205,0.627264888043406,0.655087691238533,0.674321731924103,0.165306911450672,0,0.129614973291793,0,35.512655137104,4.48549638131936,2.64733584731356,3.88902376688095,3.48731523389874,3.37912250981556,2.58185925020659,0.651021924219751,0.314578033277133,17.8772249411244,29.6670906445601,0,0.810900861160657,0.924398614483445,0,0,0,0,0.147689527174577,0,0,0,0,0.288635524920988,0,0,0.443971906748129,0,0,0,0.375364950902364,0.183151624267265,0,0,24.8490810751509,19.7939851698086,20.0513429703789,14.4356673168698,8.90607275701835,13.5970901530146,14.8504950050997,11.7083512838297,11.3285602246051,10.3552062350364,3.21740777510948,6.3843979744165,5.63420898988643,4.132814190161,5.44994222832754,6.43452279575049,3.11145418922261,2.26638562962784,4.1719497246936,2.77966932940177,3.29523089857312,3.39527414494937,4.96299989590377,4.28968521112624,4.82457939227151,4.28664322154766,3.24476112645595,3.47236596834669,4.53294490883637,3.23837624295674,2.05721551431249,4.2594193478241,2.86123427936785,3.48831399917588,4.32903149910521,3.89227196301712,4.024415403201,6.05060336307039,4.75314398460516,4.48913817326191,2.72860541685601,4.43270170690036,3.6830793885272,4.02835787083512,3.2794123866794,7.74412791607632,3.27504251823572,2.79332370262788,0.765153328275374,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr7:3390522..3390572,+ | |||
}} |
Revision as of 13:21, 14 September 2013
Short description: | p@chr7:3390522..3390572, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:3390522..3390572, + |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-15 | 23 |
neural cell | 8.97e-15 | 43 |
ectodermal cell | 4.24e-14 | 44 |
neurectodermal cell | 4.24e-14 | 44 |
neuron | 2.55e-13 | 33 |
neuronal stem cell | 2.55e-13 | 33 |
neuroblast | 2.55e-13 | 33 |
electrically signaling cell | 2.55e-13 | 33 |
electrically responsive cell | 1.24e-10 | 39 |
electrically active cell | 1.24e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.