FFCP PHASE1:Mm9::chr7:28338157..28338268,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18807|HGNC=|MCL_coexpression_id=38|UniProt=O35405,D3YY25|association_with_transcript=0bp_to_ENSMUST00000117095,ENSMUST00000117611,ENSMUST00000127240,ENSMUST00000143903_5end|description=CAGE_peak_3_at_Pld3_5end|id=chr7:28338157..28338268,-|ontology_enrichment_celltype=CL:0000333!4.60e-07!10;CL:0000095!4.60e-07!10;CL:0000243!4.60e-07!10;CL:0000123!4.60e-07!10;CL:0000125!4.60e-07!10;CL:0000030!4.60e-07!10;CL:0000339!4.60e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,4.60e-07,10;CL:0000095,4.60e-07,10;CL:0000243,4.60e-07,10;CL:0000123,4.60e-07,10;CL:0000125,4.60e-07,10;CL:0000030,4.60e-07,10;CL:0000339,4.60e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.75e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.75e-07,33|phase1_expression=6.72625157840135,3.48975407639361,5.91499011206397,3.0246421130683,3.00537437967808,1.6787927191189,2.10251376535973,3.74457637980571,0.84473233291,1.40438715793196,0.513653904676515,1.43589886191606,5.13602189793617,3.93391810885488,3.33109761815663,2.63217847606774,1.39912375625629,5.20512572841092,3.97631857456642,7.63901373236454,11.3107575900923,4.17021995043718,5.48519557191764,2.87986361028132,2.2940928106717,1.72269589234506,1.7230479846363,1.939241094173,1.52018735565099,1.00812051903972,1.99557459589774,6.98533740805594,8.61090702618398,0,1.44425809875637,0.997407872150954,0.816677425049476,18.4153917524239,10.1573594788094,17.2762835511353,18.2351761289614,26.6387739133794,21.8479658864019,20.7729749659703,20.5795170375615,12.2976323948327,49.2906546939265,19.8402892306206,21.7489320907127,19.8318497055769,17.778275546421,23.0004102983955,4.02678254538567,7.97898356212479,3.6970317905671,29.327575708098,36.3897468722221,40.2224231976405,4.24864567805155,9.52183762689659,7.60597684207415,19.6529828600097,26.6788438833342,98.9889689009539,95.9200371689965,123.623540000621,42.2436155830951,37.6533939215123,3.42175720617976,6.34527910158946,3.36519938162211,7.42692559449889,10.8225585066291,5.38959516545798,5.271500906003,4.5960939330501,13.2139057199266,7.15049093277051,8.44835932909339,5.40733779693795,5.58074625974699,5.2091337055676,12.8424179540635,10.1297269805702,10.2374826010463,5.59794312399969,6.97621235915604,5.96478226640962,23.7022985132866,26.072188236841,20.0006497204158,15.487629785665,2.03991400112325,2.69851595818909,5.84798775702902,2.68816132258401,11.0951091904084,15.1682987094471,12.7295142255406,12.3668851078619,5.49289337129054,7.69958864485907,17.8363667794652,7.11066703153331,1.08245520505607,1.52015919285059,0.505524445014783,5.02409070763864,22.2686579936568,25.8289321972795,12.3174582003956,27.0974275697806,23.522780720118,20.4982791151567,18.8141931417128,25.7616512225835,9.88779870937496,28.1968745993828,9.73071607144862,15.5296175949513,14.3546986999256,9.21262980956922,3.72783522436244,9.36898550436951,4.39838084308256,5.62005521458901,4.43315960671905,1.19980546198682,5.08280908292259,10.0359728401231,8.23501085073528,3.01570445070875,5.38855392596057,2.30143911597297,9.55825004973976,6.00292673350703,19.0439610400091,12.4406970610093,4.0435641349388,5.89237196482127,4.81445638962004,7.58676944630461,8.46292010085141,8.89158425230719,8.57259889306731,11.1458936647819,11.9001190190856,12.6764651662118,3.01795190105979,3.9712276835242,5.98233822157426,7.01426343768239,7.50727572909114,15.6713474934975,13.3758388665163,7.56330213910274,4.21327912387941,3.86021860672073,5.39910648851626,8.49215667395558,8.91199027928165,10.8037236876609,9.46978942340841,14.9540816128027,10.4901636763417,9.30135779001631,10.1943892531855,11.0927075248811,11.3546296440302,14.6109043030395,14.4302480991623,13.1579988682799,15.8076083009556,14.8969124824013,7.36014819974445,5.55684906848136,5.61711931072457,4.23120906661671,5.75878276445132,7.19933682767359,7.86091514064769,7.66397393568702,6.44896327150124,7.03834816616469,8.0669940462567,5.59976446061637,6.28338022000674,9.35095418593409,9.74820435595601,13.4822911298133,4.75503709724327,6.17337947088538,6.44870863240478,8.91138398355885,7.88954149711563,7.33144780243131,9.50367187121366,6.17195215034803,11.0031574596208,9.74226976665374,10.8329122210549,8.14421281883883,7.70776830426587,3.83743743147016,4.32429789249047,5.39669069723649,3.85434230638156,6.02942899381042,6.87489799809833,7.19240343627027,3.72911021582581,6.58947391651396,0,7.07067800570156,9.98520553966594,7.32478746046624,6.99649912735457,7.71909634181387,16.9972934953276,4.9267767060326,8.8001087278694,8.82674446030978,10.3263709246941,10.2178817039508,15.9489239393629,10.3420833364633,16.2364198429377,14.8381342064679,17.0616602463511,14.0922450655535,13.6421135674058,13.8863096238251,52.7769493787453,41.8807376540406,2.95058563811422,5.79467167239938,13.3256989689867,9.72856998715286,10.1639666133539,11.8661335786055,11.042787679569,11.7131623288992,17.0184484208911,14.8160654730582,20.0518806674155,17.2676683781188,16.5972387686707,11.9824901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| ||
|EntrezGene=18807 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=O35405,D3YY25 | |||
|association_with_transcript=0bp_to_ENSMUST00000117095,ENSMUST00000117611,ENSMUST00000127240,ENSMUST00000143903_5end | |||
|description=CAGE_peak_3_at_Pld3_5end | |||
|id=chr7:28338157..28338268,- | |||
|ontology_enrichment_celltype=CL:0000333!4.60e-07!10;CL:0000095!4.60e-07!10;CL:0000243!4.60e-07!10;CL:0000123!4.60e-07!10;CL:0000125!4.60e-07!10;CL:0000030!4.60e-07!10;CL:0000339!4.60e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,4.60e-07,10;CL:0000095,4.60e-07,10;CL:0000243,4.60e-07,10;CL:0000123,4.60e-07,10;CL:0000125,4.60e-07,10;CL:0000030,4.60e-07,10;CL:0000339,4.60e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.75e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.75e-07,33 | |||
|phase1_expression=6.72625157840135,3.48975407639361,5.91499011206397,3.0246421130683,3.00537437967808,1.6787927191189,2.10251376535973,3.74457637980571,0.84473233291,1.40438715793196,0.513653904676515,1.43589886191606,5.13602189793617,3.93391810885488,3.33109761815663,2.63217847606774,1.39912375625629,5.20512572841092,3.97631857456642,7.63901373236454,11.3107575900923,4.17021995043718,5.48519557191764,2.87986361028132,2.2940928106717,1.72269589234506,1.7230479846363,1.939241094173,1.52018735565099,1.00812051903972,1.99557459589774,6.98533740805594,8.61090702618398,0,1.44425809875637,0.997407872150954,0.816677425049476,18.4153917524239,10.1573594788094,17.2762835511353,18.2351761289614,26.6387739133794,21.8479658864019,20.7729749659703,20.5795170375615,12.2976323948327,49.2906546939265,19.8402892306206,21.7489320907127,19.8318497055769,17.778275546421,23.0004102983955,4.02678254538567,7.97898356212479,3.6970317905671,29.327575708098,36.3897468722221,40.2224231976405,4.24864567805155,9.52183762689659,7.60597684207415,19.6529828600097,26.6788438833342,98.9889689009539,95.9200371689965,123.623540000621,42.2436155830951,37.6533939215123,3.42175720617976,6.34527910158946,3.36519938162211,7.42692559449889,10.8225585066291,5.38959516545798,5.271500906003,4.5960939330501,13.2139057199266,7.15049093277051,8.44835932909339,5.40733779693795,5.58074625974699,5.2091337055676,12.8424179540635,10.1297269805702,10.2374826010463,5.59794312399969,6.97621235915604,5.96478226640962,23.7022985132866,26.072188236841,20.0006497204158,15.487629785665,2.03991400112325,2.69851595818909,5.84798775702902,2.68816132258401,11.0951091904084,15.1682987094471,12.7295142255406,12.3668851078619,5.49289337129054,7.69958864485907,17.8363667794652,7.11066703153331,1.08245520505607,1.52015919285059,0.505524445014783,5.02409070763864,22.2686579936568,25.8289321972795,12.3174582003956,27.0974275697806,23.522780720118,20.4982791151567,18.8141931417128,25.7616512225835,9.88779870937496,28.1968745993828,9.73071607144862,15.5296175949513,14.3546986999256,9.21262980956922,3.72783522436244,9.36898550436951,4.39838084308256,5.62005521458901,4.43315960671905,1.19980546198682,5.08280908292259,10.0359728401231,8.23501085073528,3.01570445070875,5.38855392596057,2.30143911597297,9.55825004973976,6.00292673350703,19.0439610400091,12.4406970610093,4.0435641349388,5.89237196482127,4.81445638962004,7.58676944630461,8.46292010085141,8.89158425230719,8.57259889306731,11.1458936647819,11.9001190190856,12.6764651662118,3.01795190105979,3.9712276835242,5.98233822157426,7.01426343768239,7.50727572909114,15.6713474934975,13.3758388665163,7.56330213910274,4.21327912387941,3.86021860672073,5.39910648851626,8.49215667395558,8.91199027928165,10.8037236876609,9.46978942340841,14.9540816128027,10.4901636763417,9.30135779001631,10.1943892531855,11.0927075248811,11.3546296440302,14.6109043030395,14.4302480991623,13.1579988682799,15.8076083009556,14.8969124824013,7.36014819974445,5.55684906848136,5.61711931072457,4.23120906661671,5.75878276445132,7.19933682767359,7.86091514064769,7.66397393568702,6.44896327150124,7.03834816616469,8.0669940462567,5.59976446061637,6.28338022000674,9.35095418593409,9.74820435595601,13.4822911298133,4.75503709724327,6.17337947088538,6.44870863240478,8.91138398355885,7.88954149711563,7.33144780243131,9.50367187121366,6.17195215034803,11.0031574596208,9.74226976665374,10.8329122210549,8.14421281883883,7.70776830426587,3.83743743147016,4.32429789249047,5.39669069723649,3.85434230638156,6.02942899381042,6.87489799809833,7.19240343627027,3.72911021582581,6.58947391651396,0,7.07067800570156,9.98520553966594,7.32478746046624,6.99649912735457,7.71909634181387,16.9972934953276,4.9267767060326,8.8001087278694,8.82674446030978,10.3263709246941,10.2178817039508,15.9489239393629,10.3420833364633,16.2364198429377,14.8381342064679,17.0616602463511,14.0922450655535,13.6421135674058,13.8863096238251,52.7769493787453,41.8807376540406,2.95058563811422,5.79467167239938,13.3256989689867,9.72856998715286,10.1639666133539,11.8661335786055,11.042787679569,11.7131623288992,17.0184484208911,14.8160654730582,20.0518806674155,17.2676683781188,16.5972387686707,11.9824901743638,17.392662229647,19.6006003017302,24.1298144854057,21.7240036474051,16.7773568134183,20.4562952485944,5.30980553359851,5.58395463156457,6.95344181018927,5.46954731292105,10.9261700365886,8.30074899448604,5.16856586336442,9.45187696641514,6.77345018930971,6.32073515871632,10.5418608574999,10.3135543248187,3.40439605753788,6.66226047915848,6.20921682157222,3.64372959553707,6.7389288784064,6.59964625127661,7.0756078858912,11.8741330154694,29.8033069240912,12.7099242518292,7.05690873775878,9.8931751764888,10.4951877352339,11.8816462108467,10.2660215842697,10.1767357841938,6.12109756922687,13.9068976507882,9.56876932467975,12.5895989457566,13.7043950253587,5.83942216714542,6.97140561377228,6.63456702298916,3.56954702987096,4.61839792668071,6.08079884739465,2.86401185404534,5.21954389408873,5.28630614529807,9.28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| |||
|short_description=p3@Pld3 | |||
}} |
Revision as of 12:59, 14 September 2013
Short description: | p3@Pld3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pld3_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000117095, ENSMUST00000117611, ENSMUST00000127240, ENSMUST00000143903_5end |
EntrezGene: | Pld3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 4.60e-07 | 10 |
neuron associated cell | 4.60e-07 | 10 |
glial cell (sensu Vertebrata) | 4.60e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.60e-07 | 10 |
glial cell | 4.60e-07 | 10 |
glioblast | 4.60e-07 | 10 |
glioblast (sensu Vertebrata) | 4.60e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.75e-07 | 33 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.