FFCP PHASE1:Mm9::chr7:16715105..16715194,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110891|HGNC=|MCL_coexpression_id=2665|UniProt=E9Q347|association_with_transcript=-314bp_to_ENSMUST00000006175_5end|description=CAGE_peak_2_at_Slc8a2_5end|id=chr7:16715105..16715194,+|ontology_enrichment_celltype=CL:0000117!2.96e-07!23;CL:0000337!2.96e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.89e-07,23;CL:0000337,3.89e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.48e-22!73;UBERON:0005743!2.48e-22!73;UBERON:0000033!3.53e-21!63;UBERON:0002346!4.54e-21!71;UBERON:0003075!4.54e-21!71;UBERON:0007284!4.54e-21!71;UBERON:0000073!8.22e-21!75;UBERON:0001016!8.22e-21!75;UBERON:0004121!5.85e-20!102;UBERON:0000924!5.85e-20!102;UBERON:0006601!5.85e-20!102;UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0000955!5.89e-19!50;UBERON:0006238!5.89e-19!50;UBERON:0002616!2.29e-18!49;UBERON:0003056!9.74e-16!49;UBERON:0003080!1.23e-13!40;UBERON:0002780!4.95e-13!39;UBERON:0001890!4.95e-13!39;UBERON:0006240!4.95e-13!39;UBERON:0002020!2.11e-12!34;UBERON:0007811!1.16e-10!86;UBERON:0000153!2.01e-10!94;UBERON:0002791!4.16e-10!29;UBERON:0003528!4.16e-10!29;UBERON:0001893!4.16e-10!29;UBERON:0000468!8.59e-09!333;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0004111!9.13e-08!122;UBERON:0000025!1.91e-07!114;UBERON:0000922!6.92e-07!328;UBERON:0003076!7.43e-07!12;UBERON:0003057!7.43e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.83e-23,92;UBERON:0001017,3.20e-22,73;UBERON:0000073,6.21e-22,54;UBERON:0002346,1.01e-21,64;UBERON:0003075,1.01e-21,64;UBERON:0007284,1.01e-21,64;UBERON:0001016,8.18e-21,75;UBERON:0001049,1.78e-20,52;UBERON:0005068,1.78e-20,52;UBERON:0006241,1.78e-20,52;UBERON:0007135,1.78e-20,52;UBERON:0004121,5.64e-18,95;UBERON:0000924,5.64e-18,95;UBERON:0006601,5.64e-18,95;UBERON:0010371,6.01e-18,73;UBERON:0000955,9.71e-18,47;UBERON:0006238,9.71e-18,47;UBERON:0002616,4.17e-17,46;UBERON:0003056,4.49e-16,49;UBERON:0003080,6.47e-14,40;UBERON:0002780,2.96e-13,39;UBERON:0001890,2.96e-13,39;UBERON:0006240,2.96e-13,39;UBERON:0002020,1.63e-12,34;UBERON:0003528,5.26e-10,29;UBERON:0002791,5.26e-10,29;UBERON:0001893,5.26e-10,29;UBERON:0002021,1.65e-08,10;UBERON:0000411,1.65e-08,10;UBERON:0001950,1.65e-08,10;UBERON:0004111,4.05e-08,122;UBERON:0000025,4.57e-08,114;UBERON:0003076,1.74e-07,12;UBERON:0003057,1.74e-07,12|phase1_expression=7.36684696682052,0,0,0,0,0,0.233612640595526,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,17.6890043514225,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,3.70642765846759,1.75748946187577,0.58328969722285,0.699932108126813,4.31257693094915,0.335565212115473,0,0,0,0,0,3.64169629547276,2.64495489636016,3.80298842103708,0,0,0,0,0,3.59520132622086,9.22123932771731,0.622137673850866,1.4850653216486,1.05162480675691,5.14171771926846,4.41737081903227,0.367472397644862,1.72521847832825,0.919218786610021,17.6185409599022,18.386976684267,16.5895055916743,3.82470234417562,4.57438218012048,3.64639359389732,12.8424179540635,11.2552522006336,15.8910177687883,3.83017161115768,4.8406371471695,4.28718725398191,0,0.226714680320357,2.31891590961342,0,0,0,0,0,1.54488862144927,0,0,0,4.08445917352373,0,2.54805239706646,0,0,0,0,2.74041311325744,2.58937883647172,3.41416919849097,1.21439728736295,1.21786191324856,1.15307748628029,2.26083960828934,1.41106448562846,0.879666139307728,0.247194967734374,8.96516012903452,0,1.61766849947409,0.220841518460394,0.484875253135222,0,82.2714039602448,62.8340120440365,0.510914110417183,0,0,0.127070227073065,24.7154555017957,14.1825186873774,2.76439574648302,50.5828771759525,34.7773021969249,22.648896856992,16.3863675698435,1.62942982160506,0.497627882440372,0.505445516867349,2.73574412652416,2.34216797332867,0.459804208866946,2.16074555766419,2.26057226753573,3.46986145671772,3.71529788826064,3.65436725782942,6.72628763921441,0.646703978798527,0.945530400839096,1.05570674498369,1.31517439456545,1.39023624612799,1.0447564995665,0.823128545631774,1.79130840136644,0,0,0,2.69263504296152,2.81431271977315,1.80062061461015,3.78791576936336,3.14822770795846,4.31947916084659,4.41814495025775,4.29237442239391,2.91913355917924,2.13927804887525,2.29834449710733,1.4592385718254,0.730999937126662,1.3173006917463,0.805238512562231,23.131894342054,3.60166143327496,0,1.05780226665418,2.77274725695804,2.78684006232526,2.31961430379768,1.61346819698674,1.77902435075896,0.760902504450237,1.42358718463353,0.658795818896044,0.754005626400808,1.1937388322469,1.55971269695296,0.898819408654221,0.648414149624083,0.995706366271836,0.948339504765408,2.17072173958485,3.38123207019241,2.44381593414377,1.35766741017338,1.26244475802573,1.01178459398812,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0.589676985339609,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0.482443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| ||
|EntrezGene=110891 | |||
|HGNC= | |||
|MCL_coexpression_id=2665 | |||
|UniProt=E9Q347 | |||
|association_with_transcript=-314bp_to_ENSMUST00000006175_5end | |||
|description=CAGE_peak_2_at_Slc8a2_5end | |||
|id=chr7:16715105..16715194,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.96e-07!23;CL:0000337!2.96e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.89e-07,23;CL:0000337,3.89e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-22!73;UBERON:0005743!2.48e-22!73;UBERON:0000033!3.53e-21!63;UBERON:0002346!4.54e-21!71;UBERON:0003075!4.54e-21!71;UBERON:0007284!4.54e-21!71;UBERON:0000073!8.22e-21!75;UBERON:0001016!8.22e-21!75;UBERON:0004121!5.85e-20!102;UBERON:0000924!5.85e-20!102;UBERON:0006601!5.85e-20!102;UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0000955!5.89e-19!50;UBERON:0006238!5.89e-19!50;UBERON:0002616!2.29e-18!49;UBERON:0003056!9.74e-16!49;UBERON:0003080!1.23e-13!40;UBERON:0002780!4.95e-13!39;UBERON:0001890!4.95e-13!39;UBERON:0006240!4.95e-13!39;UBERON:0002020!2.11e-12!34;UBERON:0007811!1.16e-10!86;UBERON:0000153!2.01e-10!94;UBERON:0002791!4.16e-10!29;UBERON:0003528!4.16e-10!29;UBERON:0001893!4.16e-10!29;UBERON:0000468!8.59e-09!333;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0004111!9.13e-08!122;UBERON:0000025!1.91e-07!114;UBERON:0000922!6.92e-07!328;UBERON:0003076!7.43e-07!12;UBERON:0003057!7.43e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.83e-23,92;UBERON:0001017,3.20e-22,73;UBERON:0000073,6.21e-22,54;UBERON:0002346,1.01e-21,64;UBERON:0003075,1.01e-21,64;UBERON:0007284,1.01e-21,64;UBERON:0001016,8.18e-21,75;UBERON:0001049,1.78e-20,52;UBERON:0005068,1.78e-20,52;UBERON:0006241,1.78e-20,52;UBERON:0007135,1.78e-20,52;UBERON:0004121,5.64e-18,95;UBERON:0000924,5.64e-18,95;UBERON:0006601,5.64e-18,95;UBERON:0010371,6.01e-18,73;UBERON:0000955,9.71e-18,47;UBERON:0006238,9.71e-18,47;UBERON:0002616,4.17e-17,46;UBERON:0003056,4.49e-16,49;UBERON:0003080,6.47e-14,40;UBERON:0002780,2.96e-13,39;UBERON:0001890,2.96e-13,39;UBERON:0006240,2.96e-13,39;UBERON:0002020,1.63e-12,34;UBERON:0003528,5.26e-10,29;UBERON:0002791,5.26e-10,29;UBERON:0001893,5.26e-10,29;UBERON:0002021,1.65e-08,10;UBERON:0000411,1.65e-08,10;UBERON:0001950,1.65e-08,10;UBERON:0004111,4.05e-08,122;UBERON:0000025,4.57e-08,114;UBERON:0003076,1.74e-07,12;UBERON:0003057,1.74e-07,12 | |||
|phase1_expression=7.36684696682052,0,0,0,0,0,0.233612640595526,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,17.6890043514225,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,3.70642765846759,1.75748946187577,0.58328969722285,0.699932108126813,4.31257693094915,0.335565212115473,0,0,0,0,0,3.64169629547276,2.64495489636016,3.80298842103708,0,0,0,0,0,3.59520132622086,9.22123932771731,0.622137673850866,1.4850653216486,1.05162480675691,5.14171771926846,4.41737081903227,0.367472397644862,1.72521847832825,0.919218786610021,17.6185409599022,18.386976684267,16.5895055916743,3.82470234417562,4.57438218012048,3.64639359389732,12.8424179540635,11.2552522006336,15.8910177687883,3.83017161115768,4.8406371471695,4.28718725398191,0,0.226714680320357,2.31891590961342,0,0,0,0,0,1.54488862144927,0,0,0,4.08445917352373,0,2.54805239706646,0,0,0,0,2.74041311325744,2.58937883647172,3.41416919849097,1.21439728736295,1.21786191324856,1.15307748628029,2.26083960828934,1.41106448562846,0.879666139307728,0.247194967734374,8.96516012903452,0,1.61766849947409,0.220841518460394,0.484875253135222,0,82.2714039602448,62.8340120440365,0.510914110417183,0,0,0.127070227073065,24.7154555017957,14.1825186873774,2.76439574648302,50.5828771759525,34.7773021969249,22.648896856992,16.3863675698435,1.62942982160506,0.497627882440372,0.505445516867349,2.73574412652416,2.34216797332867,0.459804208866946,2.16074555766419,2.26057226753573,3.46986145671772,3.71529788826064,3.65436725782942,6.72628763921441,0.646703978798527,0.945530400839096,1.05570674498369,1.31517439456545,1.39023624612799,1.0447564995665,0.823128545631774,1.79130840136644,0,0,0,2.69263504296152,2.81431271977315,1.80062061461015,3.78791576936336,3.14822770795846,4.31947916084659,4.41814495025775,4.29237442239391,2.91913355917924,2.13927804887525,2.29834449710733,1.4592385718254,0.730999937126662,1.3173006917463,0.805238512562231,23.131894342054,3.60166143327496,0,1.05780226665418,2.77274725695804,2.78684006232526,2.31961430379768,1.61346819698674,1.77902435075896,0.760902504450237,1.42358718463353,0.658795818896044,0.754005626400808,1.1937388322469,1.55971269695296,0.898819408654221,0.648414149624083,0.995706366271836,0.948339504765408,2.17072173958485,3.38123207019241,2.44381593414377,1.35766741017338,1.26244475802573,1.01178459398812,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0.589676985339609,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0.482443521363367,0.369506380333209,1.51593129416388,1.62964976442026,1.35796068620151,0.938760993154008,0.670025029767263,1.42826184531608,0.585400943573396,1.57635144106191,2.6575762757853,0.318909537314974,1.96635977658886,0.345369963731791,0.578596234326046,0,0,0,0,13.4862495589745,11.2523219128515,0,0.504941854408746,1.26203287766503,0.780877488593277,1.29254038639679,0.238968797952552,0.445597348164788,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,13.8168166061377,1.56134093729095,2.84904965867608,0.977321756121456,3.29940245945071,1.32745138339963,0.971122544619926,2.11626489875326,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.09060118843252,1.06949213515416,0.632073515871632,0,0,4.76615448055303,1.98067203434441,2.97524972700335,1.92903331528433,2.12808280370728,1.24858172321449,3.62007845324666,3.65357938937519,0,0.21183207086382,0.882113592219848,0.8244312647074,0.807322133479528,0.542816324353403,0.954978752025092,0.656563598980245,1.1659233465194,9.08583979851498,0.170870880797853,0.619160603889667,1.66675074632741,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,2.84702394223022,1.62655573701479,3.34816556547584,2.71814784818809,2.62035076495413,3.10187996685088,1.81837602595739,2.35580347785627,1.8146096260851,0.621339313086926,65.3883808873661,1.34564891439581,1.98550188548517,1.75006069509643,0.904118764344118,1.85851738039856,2.11243029562357,1.3020438484395,2.09718688851422,47.8336559235492,42.3404109199062,0,0.810900861160657,1.54066435747241,1.16928740680016,1.43221356533985,0.39736270956253,0.120195449519969,0,0.706765149637033,0.457240839929999,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0.453460767230423,0.221985953374065,0.269141569828427,0.167884616364078,3.67060228661162,3.19060208267009,3.11357761254351,1.71494703263253,0,22.0253218620656,13.8097570952153,27.498984645091,28.5276282690521,39.0497036269266,34.7481192799262,22.9507650078814,50.4359747611127,46.6736681253731,53.3293121104374,1.45302286617847,1.99512436700516,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,0.888986911206461,2.06035057238894,3.20919209591815,0.758091635291392,2.28131369901216,1.88626341386076,1.31098110457835,1.47257850531199,2.01024141344646,2.38146845641537,0.927074607558844,1.35036454324594,0.412085900803307,1.17759136107518,1.37147700954166,1.95223386775271,1.66905332963125,2.180196249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| |||
|short_description=p2@Slc8a2 | |||
}} |
Revision as of 12:32, 14 September 2013
Short description: | p2@Slc8a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc8a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2665 |
Association with transcript: | -314bp_to_ENSMUST00000006175_5end |
EntrezGene: | Slc8a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.89e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.83e-23 | 92 |
central nervous system | 3.20e-22 | 73 |
regional part of nervous system | 6.21e-22 | 54 |
neurectoderm | 1.01e-21 | 64 |
neural plate | 1.01e-21 | 64 |
presumptive neural plate | 1.01e-21 | 64 |
nervous system | 8.18e-21 | 75 |
neural tube | 1.78e-20 | 52 |
neural rod | 1.78e-20 | 52 |
future spinal cord | 1.78e-20 | 52 |
neural keel | 1.78e-20 | 52 |
ectoderm-derived structure | 5.64e-18 | 95 |
ectoderm | 5.64e-18 | 95 |
presumptive ectoderm | 5.64e-18 | 95 |
ecto-epithelium | 6.01e-18 | 73 |
brain | 9.71e-18 | 47 |
future brain | 9.71e-18 | 47 |
regional part of brain | 4.17e-17 | 46 |
pre-chordal neural plate | 4.49e-16 | 49 |
anterior neural tube | 6.47e-14 | 40 |
regional part of forebrain | 2.96e-13 | 39 |
forebrain | 2.96e-13 | 39 |
future forebrain | 2.96e-13 | 39 |
gray matter | 1.63e-12 | 34 |
brain grey matter | 5.26e-10 | 29 |
regional part of telencephalon | 5.26e-10 | 29 |
telencephalon | 5.26e-10 | 29 |
occipital lobe | 1.65e-08 | 10 |
visual cortex | 1.65e-08 | 10 |
neocortex | 1.65e-08 | 10 |
anatomical conduit | 4.05e-08 | 122 |
tube | 4.57e-08 | 114 |
posterior neural tube | 1.74e-07 | 12 |
chordal neural plate | 1.74e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.