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FFCP PHASE1:Mm9::chr7:148380946..148380982,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70552|HGNC=|MCL_coexpression_id=0|UniProt=Q8K375|association_with_transcript=0bp_to_ENSMUST00000047093_5end|description=CAGE_peak_3_at_Lrrc56_5end|id=chr7:148380946..148380982,+|ontology_enrichment_celltype=CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0002319!1.59e-08!43|ontology_enrichment_celltype_v019_2=CL:0002319,3.19e-11,43;CL:0000221,7.44e-11,44;CL:0000133,7.44e-11,44;CL:0002453,8.01e-11,8;CL:0000333,2.07e-08,10;CL:0000095,2.07e-08,10;CL:0000243,2.07e-08,10;CL:0000123,2.07e-08,10;CL:0000125,2.07e-08,10;CL:0000030,2.07e-08,10;CL:0000339,2.07e-08,10;CL:0000117,6.68e-08,23;CL:0000337,6.68e-08,23;CL:0002609,7.37e-08,6;CL:0000128,1.63e-07,6;CL:0000126,1.63e-07,6;CL:0000127,1.63e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.34e-14,49;UBERON:0001017,4.73e-13,73;UBERON:0001016,1.65e-12,75;UBERON:0002780,2.36e-12,39;UBERON:0001890,2.36e-12,39;UBERON:0006240,2.36e-12,39;UBERON:0004121,3.95e-12,95;UBERON:0000924,3.95e-12,95;UBERON:0006601,3.95e-12,95;UBERON:0003080,6.39e-12,40;UBERON:0002616,3.86e-11,46;UBERON:0000955,8.57e-11,47;UBERON:0006238,8.57e-11,47;UBERON:0002346,1.59e-10,64;UBERON:0003075,1.59e-10,64;UBERON:0007284,1.59e-10,64;UBERON:0000007,5.68e-10,8;UBERON:0003296,5.68e-10,8;UBERON:0010133,5.68e-10,8;UBERON:0001049,2.87e-09,52;UBERON:0005068,2.87e-09,52;UBERON:0006241,2.87e-09,52;UBERON:0007135,2.87e-09,52;UBERON:0000073,9.69e-09,54;UBERON:0010371,1.74e-08,73;UBERON:0001894,9.44e-08,10;UBERON:0006222,9.44e-08,10;UBERON:0003528,9.46e-07,29;UBERON:0002791,9.46e-07,29;UBERON:0001893,9.46e-07,29|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,12.161190491603,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,1.97717564461025,1.1665793944457,1.39986421625363,2.87505128729943,0,0,0,0,0.286533439938757,0,2.42779753031517,2.11596391708813,2.53532561402472,0,0,0,0,0,2.09720077362883,8.06858441175265,2.69592992002042,3.51015439662396,1.89292465216244,0.856952953211411,0,1.83736198822431,2.01275489138296,0,0,0.127687338085188,0.153606533256243,3.56092976871523,2.8361169516747,1.56274011167028,0,0,0.45839474333043,0.883885756421003,0.569486723196412,0.931997229126503,0,0.302286240427142,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0.281686839553361,0,0,0,0,0,0,2.39786147410026,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,2.51308704225729,0,0,0.20778804455956,0.486723789203273,0.509196819251581,0,0,0,1.43132487258974,0.689706313300419,2.70093194708024,1.35634336052144,1.90502197623718,0.896796041993948,0.749613796477831,0.258703370739016,1.72454394346274,1.51284864134255,0.175951124163949,0.876782929710299,0.556094498451196,0,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.590292695242212,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,2.05809224758569,0,0,1.06644125267617,0.928946687441754,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,1.32767530667157,0.571242563048644,1.1270773567308,0.203651327845314,1.16371492300575,0.420814919341911,0.316182685621286,0.147610147979602,0.784993639206874,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.651859905768103,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0,0.283076530788832,1.21443210502468,0.292255857911312,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.62054984628179,1.94038025674132,1.07168517515796,2.30542303734956,1.78368817602071,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,1.89801596148681,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.247960367176008,0,0,0,93.5730278215756,0.747582730219894,0.330916980914195,0.583353565032143,0.516639293910924,0.506868376472335,1.05621514781179,0.2604087696879,0.314578033277133,10.8712854371703,39.1720808510697,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0.288635524920988,0,0,0.443971906748129,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.55681021376265,1.59609949360412,1.70733605754134,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0,0.37456602987953,0.640251524048693,0.402048282689293,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,1.24233064311536,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0,0.192906610981141,0.749431733813838,0.935726433781634,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p3@Lrrc56}}
|EntrezGene=70552
|HGNC=
|MCL_coexpression_id=0
|UniProt=Q8K375
|association_with_transcript=0bp_to_ENSMUST00000047093_5end
|description=CAGE_peak_3_at_Lrrc56_5end
|id=chr7:148380946..148380982,+
|ontology_enrichment_celltype=CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0002319!1.59e-08!43
|ontology_enrichment_celltype_v019_2=CL:0002319,3.19e-11,43;CL:0000221,7.44e-11,44;CL:0000133,7.44e-11,44;CL:0002453,8.01e-11,8;CL:0000333,2.07e-08,10;CL:0000095,2.07e-08,10;CL:0000243,2.07e-08,10;CL:0000123,2.07e-08,10;CL:0000125,2.07e-08,10;CL:0000030,2.07e-08,10;CL:0000339,2.07e-08,10;CL:0000117,6.68e-08,23;CL:0000337,6.68e-08,23;CL:0002609,7.37e-08,6;CL:0000128,1.63e-07,6;CL:0000126,1.63e-07,6;CL:0000127,1.63e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.34e-14,49;UBERON:0001017,4.73e-13,73;UBERON:0001016,1.65e-12,75;UBERON:0002780,2.36e-12,39;UBERON:0001890,2.36e-12,39;UBERON:0006240,2.36e-12,39;UBERON:0004121,3.95e-12,95;UBERON:0000924,3.95e-12,95;UBERON:0006601,3.95e-12,95;UBERON:0003080,6.39e-12,40;UBERON:0002616,3.86e-11,46;UBERON:0000955,8.57e-11,47;UBERON:0006238,8.57e-11,47;UBERON:0002346,1.59e-10,64;UBERON:0003075,1.59e-10,64;UBERON:0007284,1.59e-10,64;UBERON:0000007,5.68e-10,8;UBERON:0003296,5.68e-10,8;UBERON:0010133,5.68e-10,8;UBERON:0001049,2.87e-09,52;UBERON:0005068,2.87e-09,52;UBERON:0006241,2.87e-09,52;UBERON:0007135,2.87e-09,52;UBERON:0000073,9.69e-09,54;UBERON:0010371,1.74e-08,73;UBERON:0001894,9.44e-08,10;UBERON:0006222,9.44e-08,10;UBERON:0003528,9.46e-07,29;UBERON:0002791,9.46e-07,29;UBERON:0001893,9.46e-07,29
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,12.161190491603,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,1.97717564461025,1.1665793944457,1.39986421625363,2.87505128729943,0,0,0,0,0.286533439938757,0,2.42779753031517,2.11596391708813,2.53532561402472,0,0,0,0,0,2.09720077362883,8.06858441175265,2.69592992002042,3.51015439662396,1.89292465216244,0.856952953211411,0,1.83736198822431,2.01275489138296,0,0,0.127687338085188,0.153606533256243,3.56092976871523,2.8361169516747,1.56274011167028,0,0,0.45839474333043,0.883885756421003,0.569486723196412,0.931997229126503,0,0.302286240427142,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0.281686839553361,0,0,0,0,0,0,2.39786147410026,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,2.51308704225729,0,0,0.20778804455956,0.486723789203273,0.509196819251581,0,0,0,1.43132487258974,0.689706313300419,2.70093194708024,1.35634336052144,1.90502197623718,0.896796041993948,0.749613796477831,0.258703370739016,1.72454394346274,1.51284864134255,0.175951124163949,0.876782929710299,0.556094498451196,0,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.590292695242212,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,2.05809224758569,0,0,1.06644125267617,0.928946687441754,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,1.32767530667157,0.571242563048644,1.1270773567308,0.203651327845314,1.16371492300575,0.420814919341911,0.316182685621286,0.147610147979602,0.784993639206874,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.651859905768103,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0,0.283076530788832,1.21443210502468,0.292255857911312,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.62054984628179,1.94038025674132,1.07168517515796,2.30542303734956,1.78368817602071,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,1.89801596148681,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.247960367176008,0,0,0,93.5730278215756,0.747582730219894,0.330916980914195,0.583353565032143,0.516639293910924,0.506868376472335,1.05621514781179,0.2604087696879,0.314578033277133,10.8712854371703,39.1720808510697,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0.288635524920988,0,0,0.443971906748129,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.55681021376265,1.59609949360412,1.70733605754134,0.972426868273176,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0,0.37456602987953,0.640251524048693,0.402048282689293,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,1.24233064311536,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0,0.192906610981141,0.749431733813838,0.935726433781634,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p3@Lrrc56
}}

Revision as of 12:17, 14 September 2013

Short description:p3@Lrrc56
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lrrc56_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000047093_5end
EntrezGene:Lrrc56
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lrrc56

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G593.57
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E239.17
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.34e-1449
central nervous system4.73e-1373
nervous system1.65e-1275
regional part of forebrain2.36e-1239
forebrain2.36e-1239
future forebrain2.36e-1239
ectoderm-derived structure3.95e-1295
ectoderm3.95e-1295
presumptive ectoderm3.95e-1295
anterior neural tube6.39e-1240
regional part of brain3.86e-1146
brain8.57e-1147
future brain8.57e-1147
neurectoderm1.59e-1064
neural plate1.59e-1064
presumptive neural plate1.59e-1064
pituitary gland5.68e-108
gland of diencephalon5.68e-108
neuroendocrine gland5.68e-108
neural tube2.87e-0952
neural rod2.87e-0952
future spinal cord2.87e-0952
neural keel2.87e-0952
regional part of nervous system9.69e-0954
ecto-epithelium1.74e-0873
diencephalon9.44e-0810
future diencephalon9.44e-0810
brain grey matter9.46e-0729
regional part of telencephalon9.46e-0729
telencephalon9.46e-0729







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