FFCP PHASE1:Hg19::chrX:56258811..56258838,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11279|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6351|TSSclassifier=S|UniProt=O95600|association_with_transcript=0bp_to_NM_007250,uc004dur.2,uc010nkg.2_5end|coexpression_cluster_id=C2960|description=CAGE_peak_2_at_KLF8_5end|id=chrX:56258811..56258838,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000236;7.37e-09;13!CL:0000990;4.46e-08;8|ontology_enrichment_celltype_v019_2=CL:0000990,5.11e-08,8;CL:0000236,5.46e-08,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.03e-22!115;UBERON:0001049!3.23e-09!57;UBERON:0005068!3.23e-09!57;UBERON:0006241!3.23e-09!57;UBERON:0007135!3.23e-09!57;UBERON:0003080!2.16e-08!42;UBERON:0001869!2.30e-08!32;UBERON:0001893!2.82e-08!34;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0002791!6.13e-08!33;UBERON:0002780!6.67e-08!41;UBERON:0001890!6.67e-08!41;UBERON:0006240!6.67e-08!41;UBERON:0001950!2.98e-07!20;UBERON:0001017!3.34e-07!82;UBERON:0002616!4.03e-07!59;UBERON:0004121!4.67e-07!169;UBERON:0005743!8.63e-07!86|ontology_enrichment_uberon_v019=UBERON:0001950;4.04e-07;20!UBERON:0001869;4.77e-07;32!UBERON:0002619;7.29e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.57e-18,114;UBERON:0001869,5.37e-08,32;UBERON:0000073,8.77e-08,53;UBERON:0002616,8.77e-08,53;UBERON:0001950,2.09e-07,20;UBERON:0001049,2.16e-07,56;UBERON:0005068,2.16e-07,56;UBERON:0006241,2.16e-07,56;UBERON:0007135,2.16e-07,56;UBERON:0001017,3.51e-07,81;UBERON:0002791,3.92e-07,32;UBERON:0001893,3.93e-07,34;UBERON:0002619,4.06e-07,22;UBERON:0002780,4.59e-07,41;UBERON:0001890,4.59e-07,41;UBERON:0003080,4.59e-07,41;UBERON:0006240,4.59e-07,41;UBERON:0003528,6.77e-07,34;UBERON:0002020,6.77e-07,34|phase1_expression=1.09007027562334,1.07050261945492,0.845726424575827,0,2.23480547213644,0.872338524100369,0,0,0.783556884599516,1.72013755551056,2.79120467188971,2.40285509343189,2.11013582582763,0,0,0,0,0,0,0.984968464614303,0,0,1.14494394852423,0.136874425072884,0.125542639594803,3.20936304141395,2.46301768349837,3.46327437780189,0.393364276848904,1.53531759238885,0.309632246632152,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.223915474239924,1.29557466407592,0.77272670290256,0,0,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.659702600373432,0,0,0,0,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0,7.03984977845291,4.91524750135918,7.11607403090844,8.10787422876364,8.80871171479227,7.47178171940828,5.94940385506376,3.81621501814146,5.12291672198504,4.11066032559657,2.6759125968766,1.32171328579026,0.560508562981536,0,0.590129310341499,1.96505381374582,0.822405995998037,1.33749196312542,0.32592226663359,0,0,1.11410456885174,2.06224135232386,1.10766947291811,2.43723477388514,0.896639238079726,0.650296737799391,1.64437904603676,0.829050053357545,1.44901542867526,0.741432815810302,0.535081656179426,0,1.69964014046349,1.14966148080576,0.68725489096526,1.01207876807801,0,0,0.950452044448374,0.752875595388864,0.895906278080929,0,0.710331756132051,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0.383587685530591,0.361439152384566,1.50401373190767,1.01392563272577,1.5905718941022,0,0.472674085820339,0.443458794925128,0.614843499851882,2.81605012320082,0.728590576585084,0.741568885568859,2.59637914923747,2.78607579678828,2.26028532882071,1.19245312152671,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0,0,0,0,0.933633106199299,0,0,0,0,0.937285727335186,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.737005903870608,1.23990937410919,0,0,0.910161361938026,0,0.505008341862199,0.750711119231785,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0,0.213557388818567,0,0.300091096084402,0.412210116953756,1.03056216018252,0.744467425326359,0,0,0,0.184099797284599,1.13152239773168,0.355009592516614,0.10075209822764,0.169560592310488,1.35282597214308,2.45471508531751,1.43402297694502,3.41526377162867,3.44577397635862,3.36962434321603,2.59152637538426,2.01856680700503,3.28479623168247,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0,1.02940686179115,1.75600456653801,1.1240175325762,1.00528972411631,3.24059558054854,0.977424915930974,1.03993478527958,0,0.115930404975077,0.352226082707465,0,0,0,0,0,1.23108503043699,1.63802985597466,1.48631162288728,0,3.52762469217605,1.70130116690864,2.95543124919399,0.581267877027924,1.15014803749563,2.95597942737566,1.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11279 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6351 | |||
|TSSclassifier=S | |||
|UniProt=O95600 | |||
|association_with_transcript=0bp_to_NM_007250,uc004dur.2,uc010nkg.2_5end | |||
|coexpression_cluster_id=C2960 | |||
|description=CAGE_peak_2_at_KLF8_5end | |||
|id=chrX:56258811..56258838,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.37e-09;13!CL:0000990;4.46e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,5.11e-08,8;CL:0000236,5.46e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-22!115;UBERON:0001049!3.23e-09!57;UBERON:0005068!3.23e-09!57;UBERON:0006241!3.23e-09!57;UBERON:0007135!3.23e-09!57;UBERON:0003080!2.16e-08!42;UBERON:0001869!2.30e-08!32;UBERON:0001893!2.82e-08!34;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0002791!6.13e-08!33;UBERON:0002780!6.67e-08!41;UBERON:0001890!6.67e-08!41;UBERON:0006240!6.67e-08!41;UBERON:0001950!2.98e-07!20;UBERON:0001017!3.34e-07!82;UBERON:0002616!4.03e-07!59;UBERON:0004121!4.67e-07!169;UBERON:0005743!8.63e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.04e-07;20!UBERON:0001869;4.77e-07;32!UBERON:0002619;7.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.57e-18,114;UBERON:0001869,5.37e-08,32;UBERON:0000073,8.77e-08,53;UBERON:0002616,8.77e-08,53;UBERON:0001950,2.09e-07,20;UBERON:0001049,2.16e-07,56;UBERON:0005068,2.16e-07,56;UBERON:0006241,2.16e-07,56;UBERON:0007135,2.16e-07,56;UBERON:0001017,3.51e-07,81;UBERON:0002791,3.92e-07,32;UBERON:0001893,3.93e-07,34;UBERON:0002619,4.06e-07,22;UBERON:0002780,4.59e-07,41;UBERON:0001890,4.59e-07,41;UBERON:0003080,4.59e-07,41;UBERON:0006240,4.59e-07,41;UBERON:0003528,6.77e-07,34;UBERON:0002020,6.77e-07,34 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.845726424575827,0,2.23480547213644,0.872338524100369,0,0,0.783556884599516,1.72013755551056,2.79120467188971,2.40285509343189,2.11013582582763,0,0,0,0,0,0,0.984968464614303,0,0,1.14494394852423,0.136874425072884,0.125542639594803,3.20936304141395,2.46301768349837,3.46327437780189,0.393364276848904,1.53531759238885,0.309632246632152,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.223915474239924,1.29557466407592,0.77272670290256,0,0,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.659702600373432,0,0,0,0,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0,7.03984977845291,4.91524750135918,7.11607403090844,8.10787422876364,8.80871171479227,7.47178171940828,5.94940385506376,3.81621501814146,5.12291672198504,4.11066032559657,2.6759125968766,1.32171328579026,0.560508562981536,0,0.590129310341499,1.96505381374582,0.822405995998037,1.33749196312542,0.32592226663359,0,0,1.11410456885174,2.06224135232386,1.10766947291811,2.43723477388514,0.896639238079726,0.650296737799391,1.64437904603676,0.829050053357545,1.44901542867526,0.741432815810302,0.535081656179426,0,1.69964014046349,1.14966148080576,0.68725489096526,1.01207876807801,0,0,0.950452044448374,0.752875595388864,0.895906278080929,0,0.710331756132051,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0.383587685530591,0.361439152384566,1.50401373190767,1.01392563272577,1.5905718941022,0,0.472674085820339,0.443458794925128,0.614843499851882,2.81605012320082,0.728590576585084,0.741568885568859,2.59637914923747,2.78607579678828,2.26028532882071,1.19245312152671,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0,0,0,0,0.933633106199299,0,0,0,0,0.937285727335186,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.737005903870608,1.23990937410919,0,0,0.910161361938026,0,0.505008341862199,0.750711119231785,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0,0.213557388818567,0,0.300091096084402,0.412210116953756,1.03056216018252,0.744467425326359,0,0,0,0.184099797284599,1.13152239773168,0.355009592516614,0.10075209822764,0.169560592310488,1.35282597214308,2.45471508531751,1.43402297694502,3.41526377162867,3.44577397635862,3.36962434321603,2.59152637538426,2.01856680700503,3.28479623168247,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0,1.02940686179115,1.75600456653801,1.1240175325762,1.00528972411631,3.24059558054854,0.977424915930974,1.03993478527958,0,0.115930404975077,0.352226082707465,0,0,0,0,0,1.23108503043699,1.63802985597466,1.48631162288728,0,3.52762469217605,1.70130116690864,2.95543124919399,0.581267877027924,1.15014803749563,2.95597942737566,1.14462964217194,3.10992173311158,3.02651902175619,4.29224273649692,0.571481048629521,1.90994212779139,0,0,0.308482478109971,1.20137223137567,0.285826432630578,0.112131084345361,0,0.22001485746285,0,7.15312891703765,0.845302752556,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0.65147236858747,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0.579125226670317,0.205476322550383,1.07436577943937,0,1.18218456121156,0.646882724578552,0.385029108839245,0,2.60279707715243,0.773288812777695,1.84267891867784,1.27587750330633,0,0,0.414415513436035,0.24538298343828,0,0,1.03985430765404,1.07057393278297,1.89242898040722,1.7571212248907,0,0,1.03473071292505,0,0,1.56390506042549,0.979005787313703,0.343143423810856,0.620304078368662,0.215714200818617,0.74709290462411,1.21251028578504,1.66435439510497,1.20956117331872,0.248107807818777,2.76231551918512,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.574890092096664,0,0.232420756919918,0,2.20557117333613,0.644566922551274,0,0,0.262248829918848,0.902399225814824,0.616122696835318,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,1.54561517471583,0,0,1.72279661398852,1.30012049207304,0,1.54673149267395,0.462145851343933,0.921022048356777,0.137836572484531,0.537101224341368,0.435050081742686,0.255679882248303,0.445160178233687,1.32227932288782,1.34533047155574,6.76347376221296,1.71968227454435,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0,0,0.35667105148125,2.12856638442359,1.26664581178598,1.64647446479951,0,0,1.25088746543166,0,2.17781969722645,2.44773882019626,1.29151611801369,1.6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| |||
|short_description=p2@KLF8 | |||
}} |
Revision as of 12:17, 14 September 2013
Short description: | p2@KLF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KLF8_5end |
Coexpression cluster: | C2960_immature_chorionic_migratory_lung_CD19_Small_amniotic |
Association with transcript: | 0bp_to_NM_007250, uc004dur.2, uc010nkg.2_5end |
EntrezGene: | KLF8 |
HGNC: | 6351 |
UniProt: | O95600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 5.11e-08 | 8 |
B cell | 5.46e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.57e-18 | 114 |
cerebral hemisphere | 5.37e-08 | 32 |
regional part of nervous system | 8.77e-08 | 53 |
regional part of brain | 8.77e-08 | 53 |
neocortex | 2.09e-07 | 20 |
neural tube | 2.16e-07 | 56 |
neural rod | 2.16e-07 | 56 |
future spinal cord | 2.16e-07 | 56 |
neural keel | 2.16e-07 | 56 |
central nervous system | 3.51e-07 | 81 |
regional part of telencephalon | 3.92e-07 | 32 |
telencephalon | 3.93e-07 | 34 |
regional part of cerebral cortex | 4.06e-07 | 22 |
regional part of forebrain | 4.59e-07 | 41 |
forebrain | 4.59e-07 | 41 |
anterior neural tube | 4.59e-07 | 41 |
future forebrain | 4.59e-07 | 41 |
brain grey matter | 6.77e-07 | 34 |
gray matter | 6.77e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.