FFCP PHASE1:Mm9::chr7:134163398..134163431,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69017|HGNC=|MCL_coexpression_id=42|UniProt=|association_with_transcript=-289bp_to_ENSMUST00000161931_5end|description=CAGE_peak_12_at_Prrt2_5end|id=chr7:134163398..134163431,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.11e-16!52;UBERON:0005068!1.11e-16!52;UBERON:0006241!1.11e-16!52;UBERON:0007135!1.11e-16!52;UBERON:0002020!3.38e-16!34;UBERON:0000073!7.90e-14!75;UBERON:0001016!7.90e-14!75;UBERON:0001017!1.40e-13!73;UBERON:0005743!1.40e-13!73;UBERON:0000955!4.34e-13!50;UBERON:0006238!4.34e-13!50;UBERON:0002616!3.28e-12!49;UBERON:0002021!9.25e-12!10;UBERON:0000411!9.25e-12!10;UBERON:0001950!9.25e-12!10;UBERON:0002346!1.39e-11!71;UBERON:0003075!1.39e-11!71;UBERON:0007284!1.39e-11!71;UBERON:0000956!3.31e-11!21;UBERON:0001869!3.31e-11!21;UBERON:0000203!3.31e-11!21;UBERON:0002791!7.84e-11!29;UBERON:0003528!7.84e-11!29;UBERON:0001893!7.84e-11!29;UBERON:0004121!9.59e-10!102;UBERON:0000924!9.59e-10!102;UBERON:0006601!9.59e-10!102;UBERON:0003080!1.90e-09!40;UBERON:0002240!3.23e-09!6;UBERON:0005174!3.23e-09!6;UBERON:0001137!3.23e-09!6;UBERON:0003076!3.24e-09!12;UBERON:0003057!3.24e-09!12;UBERON:0002619!4.08e-09!17;UBERON:0000033!7.71e-09!63;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0000153!2.67e-08!94;UBERON:0001948!5.13e-08!5;UBERON:0002315!5.13e-08!5;UBERON:0007811!7.99e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.82e-14,17;UBERON:0002021,8.21e-14,10;UBERON:0000411,8.21e-14,10;UBERON:0001950,8.21e-14,10;UBERON:0000956,1.45e-11,21;UBERON:0001869,1.45e-11,21;UBERON:0000203,1.45e-11,21;UBERON:0002020,4.32e-11,34;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003528,1.61e-08,29;UBERON:0002791,1.61e-08,29;UBERON:0001893,1.61e-08,29;UBERON:0002616,2.48e-08,46;UBERON:0000955,3.66e-08,47;UBERON:0006238,3.66e-08,47;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0,0.15279824777681,1.47314292736834,0.711858403995515,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,12.7762491156208,0,0,0,0,0.299581278809645,0,0.251308704225729,0.869121600961382,0.511430914660661,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.484393280087717,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,1.37016503954128,2.2661816921691,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p12@Prrt2}} | ||
|EntrezGene=69017 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt= | |||
|association_with_transcript=-289bp_to_ENSMUST00000161931_5end | |||
|description=CAGE_peak_12_at_Prrt2_5end | |||
|id=chr7:134163398..134163431,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-16!52;UBERON:0005068!1.11e-16!52;UBERON:0006241!1.11e-16!52;UBERON:0007135!1.11e-16!52;UBERON:0002020!3.38e-16!34;UBERON:0000073!7.90e-14!75;UBERON:0001016!7.90e-14!75;UBERON:0001017!1.40e-13!73;UBERON:0005743!1.40e-13!73;UBERON:0000955!4.34e-13!50;UBERON:0006238!4.34e-13!50;UBERON:0002616!3.28e-12!49;UBERON:0002021!9.25e-12!10;UBERON:0000411!9.25e-12!10;UBERON:0001950!9.25e-12!10;UBERON:0002346!1.39e-11!71;UBERON:0003075!1.39e-11!71;UBERON:0007284!1.39e-11!71;UBERON:0000956!3.31e-11!21;UBERON:0001869!3.31e-11!21;UBERON:0000203!3.31e-11!21;UBERON:0002791!7.84e-11!29;UBERON:0003528!7.84e-11!29;UBERON:0001893!7.84e-11!29;UBERON:0004121!9.59e-10!102;UBERON:0000924!9.59e-10!102;UBERON:0006601!9.59e-10!102;UBERON:0003080!1.90e-09!40;UBERON:0002240!3.23e-09!6;UBERON:0005174!3.23e-09!6;UBERON:0001137!3.23e-09!6;UBERON:0003076!3.24e-09!12;UBERON:0003057!3.24e-09!12;UBERON:0002619!4.08e-09!17;UBERON:0000033!7.71e-09!63;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0000153!2.67e-08!94;UBERON:0001948!5.13e-08!5;UBERON:0002315!5.13e-08!5;UBERON:0007811!7.99e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.82e-14,17;UBERON:0002021,8.21e-14,10;UBERON:0000411,8.21e-14,10;UBERON:0001950,8.21e-14,10;UBERON:0000956,1.45e-11,21;UBERON:0001869,1.45e-11,21;UBERON:0000203,1.45e-11,21;UBERON:0002020,4.32e-11,34;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0003528,1.61e-08,29;UBERON:0002791,1.61e-08,29;UBERON:0001893,1.61e-08,29;UBERON:0002616,2.48e-08,46;UBERON:0000955,3.66e-08,47;UBERON:0006238,3.66e-08,47;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.558365998002762,0,0.15279824777681,1.47314292736834,0.711858403995515,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,12.7762491156208,0,0,0,0,0.299581278809645,0,0.251308704225729,0.869121600961382,0.511430914660661,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.484393280087717,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,1.37016503954128,2.2661816921691,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p12@Prrt2 | |||
}} |
Revision as of 11:53, 14 September 2013
Short description: | p12@Prrt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Prrt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -289bp_to_ENSMUST00000161931_5end |
EntrezGene: | Prrt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.82e-14 | 17 |
occipital lobe | 8.21e-14 | 10 |
visual cortex | 8.21e-14 | 10 |
neocortex | 8.21e-14 | 10 |
cerebral cortex | 1.45e-11 | 21 |
cerebral hemisphere | 1.45e-11 | 21 |
pallium | 1.45e-11 | 21 |
gray matter | 4.32e-11 | 34 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
brain grey matter | 1.61e-08 | 29 |
regional part of telencephalon | 1.61e-08 | 29 |
telencephalon | 1.61e-08 | 29 |
regional part of brain | 2.48e-08 | 46 |
brain | 3.66e-08 | 47 |
future brain | 3.66e-08 | 47 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.