FFCP PHASE1:Hg19::chrX:33229657..33229675,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1756|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2928|TSSclassifier=S|UniProt=F5H6K1,P11532,Q8N754,Q8WYE8|association_with_transcript=0bp_to_ENST00000488902,ENST00000542849,NM_004006,uc004dda.1,uc010ngo.1,uc010ngr.1_5end|coexpression_cluster_id=C1113|description=CAGE_peak_2_at_DMD_5end|id=chrX:33229657..33229675,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;7.67e-07;13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.21e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.20e-53!115;UBERON:0002616!8.36e-25!59;UBERON:0001049!2.55e-24!57;UBERON:0005068!2.55e-24!57;UBERON:0006241!2.55e-24!57;UBERON:0007135!2.55e-24!57;UBERON:0000955!5.13e-19!69;UBERON:0006238!5.13e-19!69;UBERON:0003075!7.01e-19!86;UBERON:0007284!7.01e-19!86;UBERON:0003080!3.61e-18!42;UBERON:0001017!7.79e-18!82;UBERON:0002780!1.48e-17!41;UBERON:0001890!1.48e-17!41;UBERON:0006240!1.48e-17!41;UBERON:0005743!1.63e-17!86;UBERON:0002346!6.51e-17!90;UBERON:0000073!3.85e-15!94;UBERON:0001016!3.85e-15!94;UBERON:0002020!9.99e-15!34;UBERON:0003528!9.99e-15!34;UBERON:0001893!1.36e-14!34;UBERON:0000481!1.88e-14!347;UBERON:0002791!3.18e-14!33;UBERON:0001869!2.70e-13!32;UBERON:0004111!6.13e-12!241;UBERON:0003056!8.81e-12!61;UBERON:0000153!1.60e-11!129;UBERON:0007811!1.60e-11!129;UBERON:0000477!2.06e-11!286;UBERON:0000025!5.17e-11!194;UBERON:0000033!5.69e-11!123;UBERON:0000468!9.10e-11!659;UBERON:0000119!1.13e-10!312;UBERON:0000483!1.23e-10!309;UBERON:0000475!4.28e-10!365;UBERON:0000956!6.26e-10!25;UBERON:0000203!6.26e-10!25;UBERON:0002619!1.62e-09!22;UBERON:0004121!2.68e-09!169;UBERON:0001950!1.35e-08!20;UBERON:0002385!1.47e-08!63;UBERON:0001015!1.47e-08!63;UBERON:0000383!1.47e-08!63;UBERON:0000924!1.71e-08!173;UBERON:0006601!1.71e-08!173;UBERON:0000922!4.13e-08!612;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0001134!1.30e-07!61;UBERON:0002036!1.30e-07!61;UBERON:0003082!1.30e-07!61;UBERON:0000923!2.19e-07!604;UBERON:0005291!2.19e-07!604;UBERON:0006598!2.19e-07!604;UBERON:0002532!2.19e-07!604;UBERON:0003076!2.38e-07!15;UBERON:0003057!2.38e-07!15;UBERON:0000467!5.19e-07!625;UBERON:0000480!6.77e-07!626;UBERON:0007100!7.22e-07!27|ontology_enrichment_uberon_v019=UBERON:0007023;5.88e-15;114!UBERON:0001893;1.10e-14;34!UBERON:0003528;2.25e-14;34!UBERON:0002020;2.25e-14;34!UBERON:0002791;3.26e-14;32!UBERON:0001869;7.42e-14;32!UBERON:0002780;8.11e-14;41!UBERON:0001890;8.11e-14;41!UBERON:0000073;6.62e-13;53!UBERON:0002616;6.62e-13;53!UBERON:0002619;5.55e-11;22!UBERON:0000956;6.98e-11;25!UBERON:0000203;6.98e-11;25!UBERON:0001134;2.04e-10;16!UBERON:0002036;2.04e-10;16!UBERON:0001950;7.65e-10;20!UBERON:0001017;1.43e-09;75!UBERON:0004921;5.80e-09;33!UBERON:0000955;9.30e-09;68!UBERON:0002385;4.37e-08;31!UBERON:0001015;4.37e-08;31!UBERON:0000383;4.37e-08;31!UBERON:0000125;6.51e-08;9!UBERON:0002308;6.51e-08;9!UBERON:0002420;1.62e-07;9!UBERON:0007245;1.62e-07;9!UBERON:0010009;1.62e-07;9!UBERON:0010011;1.62e-07;9!UBERON:0000454;1.62e-07;9!UBERON:0001016;2.31e-07;83!UBERON:0011216;3.30e-07;132!UBERON:0005409;5.73e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-58,114;UBERON:0001049,2.03e-25,56;UBERON:0005068,2.03e-25,56;UBERON:0006241,2.03e-25,56;UBERON:0007135,2.03e-25,56;UBERON:0000073,4.86e-23,53;UBERON:0002616,4.86e-23,53;UBERON:0000955,2.24e-20,68;UBERON:0006238,2.24e-20,68;UBERON:0001017,1.29e-19,81;UBERON:0003075,4.74e-19,82;UBERON:0007284,4.74e-19,82;UBERON:0002780,7.13e-19,41;UBERON:0001890,7.13e-19,41;UBERON:0003080,7.13e-19,41;UBERON:0006240,7.13e-19,41;UBERON:0002346,2.51e-17,86;UBERON:0003528,4.42e-17,34;UBERON:0002020,4.42e-17,34;UBERON:0001016,6.30e-17,89;UBERON:0001893,6.48e-17,34;UBERON:0011216,1.56e-16,223;UBERON:0010314,7.44e-16,132;UBERON:0002791,1.15e-15,32;UBERON:0001869,2.78e-15,32;UBERON:0010371,1.96e-13,104;UBERON:0003056,1.27e-11,61;UBERON:0002619,4.15e-11,22;UBERON:0000956,4.88e-11,25;UBERON:0000203,4.88e-11,25;UBERON:0004111,5.61e-11,240;UBERON:0000483,1.62e-10,306;UBERON:0000119,3.98e-10,309;UBERON:0000025,6.04e-10,192;UBERON:0001950,6.14e-10,20;UBERON:0004121,9.10e-10,171;UBERON:0000924,9.10e-10,171;UBERON:0006601,9.10e-10,171;UBERON:0002050,2.89e-09,564;UBERON:0000923,3.29e-09,560;UBERON:0010316,3.29e-09,560;UBERON:0005291,3.29e-09,560;UBERON:0006598,3.29e-09,560;UBERON:0010317,3.29e-09,560;UBERON:0002532,3.29e-09,560;UBERON:0005423,2.99e-08,581;UBERON:0000922,4.06e-08,592;UBERON:0002385,4.76e-08,64;UBERON:0001015,4.76e-08,64;UBERON:0000383,4.76e-08,64;UBERON:0000125,6.83e-08,9;UBERON:0002308,6.83e-08,9;UBERON:0003076,9.87e-08,15;UBERON:0003057,9.87e-08,15;UBERON:0002420,1.41e-07,9;UBERON:0007245,1.41e-07,9;UBERON:0010009,1.41e-07,9;UBERON:0010011,1.41e-07,9;UBERON:0000454,1.41e-07,9;UBERON:0001134,5.41e-07,62;UBERON:0002036,5.41e-07,62;UBERON:0003082,5.41e-07,62|phase1_expressio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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |||
|TSSclassifier=S | |||
|UniProt=F5H6K1,P11532,Q8N754,Q8WYE8 | |||
|association_with_transcript=0bp_to_ENST00000488902,ENST00000542849,NM_004006,uc004dda.1,uc010ngo.1,uc010ngr.1_5end | |||
|coexpression_cluster_id=C1113 | |||
|description=CAGE_peak_2_at_DMD_5end | |||
|id=chrX:33229657..33229675,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.21e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@DMD | |||
}} |
Revision as of 11:45, 14 September 2013
Short description: | p2@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DMD_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000488902, ENST00000542849, NM_004006, uc004dda.1, uc010ngo.1, uc010ngr.1_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | F5H6K1P11532Q8N754Q8WYE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.