FFCP PHASE1:Mm9::chr7:122989632..122989668,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20679|HGNC=|MCL_coexpression_id=15|UniProt=P40645,Q3V1J7|association_with_transcript=-13bp_to_ENSMUST00000166207,uc009jip.1_5end|description=CAGE_peak_2_at_Sox6_5end|id=chr7:122989632..122989668,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.47e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.39e-08,49;UBERON:0005173,1.39e-08,49;UBERON:0002417,1.39e-08,49;UBERON:0000916,1.39e-08,49;UBERON:0002106,2.41e-08,6;UBERON:0004457,2.41e-08,6;UBERON:0000042,2.41e-08,6;UBERON:0004854,2.41e-08,6;UBERON:0009034,2.41e-08,6;UBERON:0002095,2.41e-08,6;UBERON:0004782,2.41e-08,6;UBERON:0003281,2.41e-08,6;UBERON:0009664,2.41e-08,6;UBERON:0002296,2.41e-08,6;UBERON:0005602,2.41e-08,6;UBERON:0001179,2.41e-08,6;UBERON:0006293,2.41e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3089640379072,70.2589177842696,79.7500541066087,0,0.137114433605739,2.12194825899015,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,5.47733238513832,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,1.56136794089522,3.04465478312141,2.7673859670727,0.904335843315735,2.11659672844269,0.125666591329675,0,0.144599356919912,22.9998743506967,7.92657564742305,34.230435361361,48.4875253135222,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,26.4986847399498,0.252722758433675,0,0,0,0,1.50704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0.426576501070468,2.09013004674395,1.03093969057675,0.403367049246685,0,0.951128130562796,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,1.48523066392647,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0.296452627087149,47.884545340519,48.3535127978479,66.7840473783016,86.6212718328907,82.2414114755741,57.8000683543823,48.620647229187,42.4794294150593,28.8289483847486,17.2521847832825,5.95425516269605,1.5601883655728,0,0,0,0.184753190166605,0.189491411770485,0.814824882210129,0,0.704070744865506,0.670025029767263,0,1.17080188714679,0.630540576424764,0.8858587585951,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0.534196811001766,0.977321756121456,0,0,1.69946445308487,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,55.7039071401,3.50857675537478,25.1864557222808,144.855343436607,123.161499176644,92.1976038022286,0,0.139951452323658,0.276399947608848,0,0,1.01659733563424,0.972048067396211,0.627264888043406,0.655087691238533,2.15782954215713,1.07449492442937,0,0,0,0,0.299033092087958,0.827292452285488,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,0.911430693907651,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,6.14640980714883,12.1553358534147,6.28839487883947,2.20612210140017,5.778414922842,3.7086310303001,4.1719497246936,5.55933865880354,4.05566879824384,5.28153755881013,6.74218853783153,6.97874161213075,8.2132720606527,5.23923060411381,4.75125736373908,7.33055037762079,4.53294490883637,4.26876868389752,4.11443102862498,5.32427418478012,5.48403236878838,6.39524233182245,6.39943786824248,7.27685627868418,6.0366231048015,3.6829759601298,6.3827933507555,3.36685362994643,3.79632057997357,4.92522411877817,5.32000356120596,4.64810523557898,6.75173138433995,0,1.87145286756327,4.29742108096597,0.57386499620653,4.63241980150983,6.4922993973718|short_description=p2@Sox6}} | ||
|EntrezGene=20679 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=P40645,Q3V1J7 | |||
|association_with_transcript=-13bp_to_ENSMUST00000166207,uc009jip.1_5end | |||
|description=CAGE_peak_2_at_Sox6_5end | |||
|id=chr7:122989632..122989668,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!3.47e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.39e-08,49;UBERON:0005173,1.39e-08,49;UBERON:0002417,1.39e-08,49;UBERON:0000916,1.39e-08,49;UBERON:0002106,2.41e-08,6;UBERON:0004457,2.41e-08,6;UBERON:0000042,2.41e-08,6;UBERON:0004854,2.41e-08,6;UBERON:0009034,2.41e-08,6;UBERON:0002095,2.41e-08,6;UBERON:0004782,2.41e-08,6;UBERON:0003281,2.41e-08,6;UBERON:0009664,2.41e-08,6;UBERON:0002296,2.41e-08,6;UBERON:0005602,2.41e-08,6;UBERON:0001179,2.41e-08,6;UBERON:0006293,2.41e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3089640379072,70.2589177842696,79.7500541066087,0,0.137114433605739,2.12194825899015,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,5.47733238513832,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,1.56136794089522,3.04465478312141,2.7673859670727,0.904335843315735,2.11659672844269,0.125666591329675,0,0.144599356919912,22.9998743506967,7.92657564742305,34.230435361361,48.4875253135222,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,26.4986847399498,0.252722758433675,0,0,0,0,1.50704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0.426576501070468,2.09013004674395,1.03093969057675,0.403367049246685,0,0.951128130562796,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,1.48523066392647,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0.296452627087149,47.884545340519,48.3535127978479,66.7840473783016,86.6212718328907,82.2414114755741,57.8000683543823,48.620647229187,42.4794294150593,28.8289483847486,17.2521847832825,5.95425516269605,1.5601883655728,0,0,0,0.184753190166605,0.189491411770485,0.814824882210129,0,0.704070744865506,0.670025029767263,0,1.17080188714679,0.630540576424764,0.8858587585951,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0.534196811001766,0.977321756121456,0,0,1.69946445308487,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,55.7039071401,3.50857675537478,25.1864557222808,144.855343436607,123.161499176644,92.1976038022286,0,0.139951452323658,0.276399947608848,0,0,1.01659733563424,0.972048067396211,0.627264888043406,0.655087691238533,2.15782954215713,1.07449492442937,0,0,0,0,0.299033092087958,0.827292452285488,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,0.911430693907651,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,6.14640980714883,12.1553358534147,6.28839487883947,2.20612210140017,5.778414922842,3.7086310303001,4.1719497246936,5.55933865880354,4.05566879824384,5.28153755881013,6.74218853783153,6.97874161213075,8.2132720606527,5.23923060411381,4.75125736373908,7.33055037762079,4.53294490883637,4.26876868389752,4.11443102862498,5.32427418478012,5.48403236878838,6.39524233182245,6.39943786824248,7.27685627868418,6.0366231048015,3.6829759601298,6.3827933507555,3.36685362994643,3.79632057997357,4.92522411877817,5.32000356120596,4.64810523557898,6.75173138433995,0,1.87145286756327,4.29742108096597,0.57386499620653,4.63241980150983,6.4922993973718 | |||
|short_description=p2@Sox6 | |||
}} |
Revision as of 11:33, 14 September 2013
Short description: | p2@Sox6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox6_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -13bp_to_ENSMUST00000166207, uc009jip.1_5end |
EntrezGene: | Sox6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.39e-08 | 49 |
abdominal segment element | 1.39e-08 | 49 |
abdominal segment of trunk | 1.39e-08 | 49 |
abdomen | 1.39e-08 | 49 |
spleen | 2.41e-08 | 6 |
cavity lining | 2.41e-08 | 6 |
serous membrane | 2.41e-08 | 6 |
gastrointestinal system mesentery | 2.41e-08 | 6 |
stomach region | 2.41e-08 | 6 |
mesentery | 2.41e-08 | 6 |
gastrointestinal system serosa | 2.41e-08 | 6 |
mesentery of stomach | 2.41e-08 | 6 |
gut mesentery | 2.41e-08 | 6 |
dorsal mesentery | 2.41e-08 | 6 |
dorsal mesogastrium | 2.41e-08 | 6 |
peritoneal cavity | 2.41e-08 | 6 |
spleen primordium | 2.41e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.