FFCP PHASE1:Hg19::chrX:19905661..19905699,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30011|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13867|TSSclassifier=S|UniProt=E9PC08,Q96B97|association_with_transcript=19bp_to_ENST00000379702,ENST00000397821_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_SH3KBP1_5end|id=chrX:19905661..19905699,-|ontology_enrichment_celltype=CL:0000037!2.64e-56!172;CL:0000566!2.64e-56!172;CL:0000738!2.24e-54!140;CL:0000988!1.54e-53!182;CL:0002032!1.54e-52!165;CL:0000837!1.54e-52!165;CL:0002031!2.07e-42!124;CL:0002087!2.27e-41!119;CL:0000763!2.97e-39!112;CL:0000049!2.97e-39!112;CL:0000766!3.31e-37!76;CL:0000557!4.09e-33!71;CL:0000134!4.39e-33!358;CL:0002320!2.31e-30!365;CL:0000839!4.03e-30!70;CL:0002009!2.41e-29!65;CL:0002194!8.69e-29!63;CL:0000576!8.69e-29!63;CL:0000040!8.69e-29!63;CL:0000559!8.69e-29!63;CL:0002057!6.53e-26!42;CL:0000048!1.92e-23!430;CL:0000860!1.06e-22!45;CL:0000219!5.94e-22!390;CL:0000723!2.64e-21!436;CL:0000034!4.88e-20!444;CL:0000838!8.07e-12!52;CL:0000542!1.32e-11!53;CL:0000051!1.32e-11!53;CL:0000945!1.63e-08!24;CL:0000826!1.63e-08!24|ontology_enrichment_celltype_v019=CL:0000860;3.15e-19;33!CL:0002057;3.15e-19;33!CL:0000576;3.27e-18;48!CL:0000473;1.07e-17;39!CL:0000234;1.07e-17;39!CL:0000766;2.43e-17;69!CL:0000738;8.77e-13;136!CL:0000763;2.83e-12;100!CL:0002087;7.07e-12;104!CL:0000988;2.14e-09;177!CL:0000945;1.29e-08;24!CL:0000542;7.29e-07;53|ontology_enrichment_celltype_v019_2=CL:0000037,5.98e-59,168;CL:0000738,5.91e-57,136;CL:0000988,5.04e-56,177;CL:0002032,3.92e-55,161;CL:0000837,3.92e-55,161;CL:0002031,9.43e-45,120;CL:0002087,9.61e-44,115;CL:0000763,5.34e-42,108;CL:0000049,5.34e-42,108;CL:0000766,2.65e-40,72;CL:0000557,4.29e-36,67;CL:0000134,2.39e-34,354;CL:0000839,6.59e-33,66;CL:0002009,3.01e-32,61;CL:0002194,1.01e-31,59;CL:0000576,1.01e-31,59;CL:0000040,1.01e-31,59;CL:0000559,1.01e-31,59;CL:0002320,1.95e-31,361;CL:0000473,8.34e-28,48;CL:0000234,8.34e-28,48;CL:0000860,5.73e-26,42;CL:0002057,5.73e-26,42;CL:0000048,1.76e-24,427;CL:0000219,5.76e-23,386;CL:0000723,2.23e-22,433;CL:0000034,4.89e-21,441;CL:0000838,6.96e-12,52;CL:0000542,1.14e-11,53;CL:0000051,1.14e-11,53;CL:0000945,1.57e-08,24;CL:0000826,1.57e-08,24|ontology_enrichment_development_v019=CL:0002057;7.32e-19;42!CL:0000049;1.08e-11;108!CL:0000051;7.29e-07;53|ontology_enrichment_disease=DOID:2531!8.63e-07!51;DOID:0060083!8.63e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,4.79e-07,51;DOID:0060083,4.79e-07,51|ontology_enrichment_uberon=UBERON:0002390!3.47e-37!102;UBERON:0003061!3.47e-37!102;UBERON:0002193!1.59e-34!112;UBERON:0002384!2.51e-30!375;UBERON:0002371!3.21e-29!80;UBERON:0001474!3.79e-26!86;UBERON:0002405!7.87e-22!115;UBERON:0004765!3.27e-19!101;UBERON:0001434!3.27e-19!101;UBERON:0003081!2.63e-10!216;UBERON:0002204!4.76e-09!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-39,98;UBERON:0003061,1.66e-39,98;UBERON:0002193,1.52e-36,108;UBERON:0002371,1.49e-31,76;UBERON:0002384,2.40e-31,371;UBERON:0002405,1.51e-30,93;UBERON:0001474,5.14e-28,82;UBERON:0004765,2.41e-21,90;UBERON:0001434,2.33e-18,100;UBERON:0003081,5.18e-13,203;UBERON:0002204,1.79e-08,167|phase1_expression=13.0808433074801,18.1985445307336,13.5316227932132,7.00513088471913,17.8784437770915,10.4680622892044,27.8629865985142,3.79031924056099,9.40268261519419,1.72013755551056,3.48900583986214,0.873765488520689,1.31883489114227,0.37129905888014,0.994192127183747,2.6893005858071,4.82155622419182,2.92124036154949,4.87932798790507,0.246242116153576,1.63200552995402,5.32873026512749,0.286235987131057,0.547497700291537,0.753255837568817,49.5923003304204,39.8187858832237,40.7721847204858,62.9382842958246,39.9182574021101,41.4907210487084,3.67768489791571,0.6024118375565,1.10926203050036,24.9444385868571,30.9928926822579,14.0928210880727,58.1695178958471,111.101623898458,80.511033035581,30.6764199708696,16.8424706329869,34.7727016306152,63.9752250630085,64.9946623144752,85.8747576604869,56.01539789427,68.2538694116231,55.4374403902235,59.264632818363,71.7249978281482,63.6137198400294,48.6091409838632,54.8661981046252,52.8163297717933,58.3551252582075,63.3142268134202,47.866102186803,60.9106945818096,69.9625279025884,82.4744892280763,66.6299626377167,78.7881447605446,81.8351521022773,65.0068694528028,83.4056280295976,82.2125368674159,63.565912309956,82.3943011103918,51.9081338845229,45.4049626975027,65.9216968417741,47.7858205035736,51.7575451464257,44.6469029926591,43.8186569112506,64.5889629092347,62.3234105292251,77.7911839613868,40.1867968675161,53.3096694893561,46.7620233637463,15.839662001519,15.2918811153397,16.011166569544,12.8019066769952,23.6233632351247,18.3920780785435,11.2377628373427,12.4026988089597,31.8759262701291,35.2342313622563,25.2300330562651,13.2171328579026,21.2993253932984,10.0085952214529,12.3927155171715,18.4715058492107,18.2985334109563,9.86400322805001,6.19252306603822,6.62826928028627,3.89653456815823,16.043105791465,9.13278313171995,12.84896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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |||
|TSSclassifier=S | |||
|UniProt=E9PC08,Q96B97 | |||
|association_with_transcript=19bp_to_ENST00000379702,ENST00000397821_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_SH3KBP1_5end | |||
|id=chrX:19905661..19905699,- | |||
|ontology_enrichment_celltype=CL:0000037!2.64e-56!172;CL:0000566!2.64e-56!172;CL:0000738!2.24e-54!140;CL:0000988!1.54e-53!182;CL:0002032!1.54e-52!165;CL:0000837!1.54e-52!165;CL:0002031!2.07e-42!124;CL:0002087!2.27e-41!119;CL:0000763!2.97e-39!112;CL:0000049!2.97e-39!112;CL:0000766!3.31e-37!76;CL:0000557!4.09e-33!71;CL:0000134!4.39e-33!358;CL:0002320!2.31e-30!365;CL:0000839!4.03e-30!70;CL:0002009!2.41e-29!65;CL:0002194!8.69e-29!63;CL:0000576!8.69e-29!63;CL:0000040!8.69e-29!63;CL:0000559!8.69e-29!63;CL:0002057!6.53e-26!42;CL:0000048!1.92e-23!430;CL:0000860!1.06e-22!45;CL:0000219!5.94e-22!390;CL:0000723!2.64e-21!436;CL:0000034!4.88e-20!444;CL:0000838!8.07e-12!52;CL:0000542!1.32e-11!53;CL:0000051!1.32e-11!53;CL:0000945!1.63e-08!24;CL:0000826!1.63e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.15e-19;33!CL:0002057;3.15e-19;33!CL:0000576;3.27e-18;48!CL:0000473;1.07e-17;39!CL:0000234;1.07e-17;39!CL:0000766;2.43e-17;69!CL:0000738;8.77e-13;136!CL:0000763;2.83e-12;100!CL:0002087;7.07e-12;104!CL:0000988;2.14e-09;177!CL:0000945;1.29e-08;24!CL:0000542;7.29e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.98e-59,168;CL:0000738,5.91e-57,136;CL:0000988,5.04e-56,177;CL:0002032,3.92e-55,161;CL:0000837,3.92e-55,161;CL:0002031,9.43e-45,120;CL:0002087,9.61e-44,115;CL:0000763,5.34e-42,108;CL:0000049,5.34e-42,108;CL:0000766,2.65e-40,72;CL:0000557,4.29e-36,67;CL:0000134,2.39e-34,354;CL:0000839,6.59e-33,66;CL:0002009,3.01e-32,61;CL:0002194,1.01e-31,59;CL:0000576,1.01e-31,59;CL:0000040,1.01e-31,59;CL:0000559,1.01e-31,59;CL:0002320,1.95e-31,361;CL:0000473,8.34e-28,48;CL:0000234,8.34e-28,48;CL:0000860,5.73e-26,42;CL:0002057,5.73e-26,42;CL:0000048,1.76e-24,427;CL:0000219,5.76e-23,386;CL:0000723,2.23e-22,433;CL:0000034,4.89e-21,441;CL:0000838,6.96e-12,52;CL:0000542,1.14e-11,53;CL:0000051,1.14e-11,53;CL:0000945,1.57e-08,24;CL:0000826,1.57e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.32e-19;42!CL:0000049;1.08e-11;108!CL:0000051;7.29e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!8.63e-07!51;DOID:0060083!8.63e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.79e-07,51;DOID:0060083,4.79e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.47e-37!102;UBERON:0003061!3.47e-37!102;UBERON:0002193!1.59e-34!112;UBERON:0002384!2.51e-30!375;UBERON:0002371!3.21e-29!80;UBERON:0001474!3.79e-26!86;UBERON:0002405!7.87e-22!115;UBERON:0004765!3.27e-19!101;UBERON:0001434!3.27e-19!101;UBERON:0003081!2.63e-10!216;UBERON:0002204!4.76e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-39,98;UBERON:0003061,1.66e-39,98;UBERON:0002193,1.52e-36,108;UBERON:0002371,1.49e-31,76;UBERON:0002384,2.40e-31,371;UBERON:0002405,1.51e-30,93;UBERON:0001474,5.14e-28,82;UBERON:0004765,2.41e-21,90;UBERON:0001434,2.33e-18,100;UBERON:0003081,5.18e-13,203;UBERON:0002204,1.79e-08,167 | |||
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| |||
|short_description=p1@SH3KBP1 | |||
}} |
Revision as of 11:33, 14 September 2013
Short description: | p1@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SH3KBP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 19bp_to_ENST00000379702, ENST00000397821_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | E9PC08Q96B97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-39 | 98 |
blood island | 1.66e-39 | 98 |
hemolymphoid system | 1.52e-36 | 108 |
bone marrow | 1.49e-31 | 76 |
connective tissue | 2.40e-31 | 371 |
immune system | 1.51e-30 | 93 |
bone element | 5.14e-28 | 82 |
skeletal element | 2.41e-21 | 90 |
skeletal system | 2.33e-18 | 100 |
lateral plate mesoderm | 5.18e-13 | 203 |
musculoskeletal system | 1.79e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.79e-07 | 51 |
immune system cancer | 4.79e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.