FFCP PHASE1:Mm9::chr7:118125986..118125997,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17540|HGNC=|UniProt=Q9WUX5,E9QM31|association_with_transcript=-11bp_to_ENSMUST00000005751,ENSMUST00000106675_5end|description=CAGE_peak_2_at_Mrvi1_5end|id=chr7:118125986..118125997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,7.47e-09,3;CL:0000737,7.47e-09,3;CL:0000746,7.47e-09,3;CL:0000513,7.47e-09,3;CL:0000680,3.16e-07,6;CL:0000187,3.16e-07,6;CL:0000056,3.16e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.35e-11!23;UBERON:0001009!6.35e-11!23;UBERON:0007100!8.24e-10!18;UBERON:0000948!8.24e-10!18;UBERON:0005498!8.24e-10!18;UBERON:0004140!8.24e-10!18;UBERON:0009881!8.24e-10!18;UBERON:0004141!8.24e-10!18;UBERON:0003084!8.24e-10!18;UBERON:0007005!8.24e-10!18;UBERON:0004139!8.24e-10!18;UBERON:0004291!8.24e-10!18;UBERON:0003103!1.06e-09!43;UBERON:0004872!1.26e-08!33;UBERON:0003914!1.40e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.14e-15,18;UBERON:0000948,8.14e-15,18;UBERON:0005498,8.14e-15,18;UBERON:0004140,8.14e-15,18;UBERON:0009881,8.14e-15,18;UBERON:0004141,8.14e-15,18;UBERON:0003084,8.14e-15,18;UBERON:0007005,8.14e-15,18;UBERON:0004139,8.14e-15,18;UBERON:0004291,8.14e-15,18;UBERON:0004535,3.07e-13,23;UBERON:0001009,3.07e-13,23;UBERON:0003103,8.34e-13,43;UBERON:0004872,2.05e-08,33;UBERON:0003914,3.59e-07,47;UBERON:0000474,6.58e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,1.65192076945513,2.34717403304412,0,0.219686182734472,0,0,0,0,0,0,6.17422646486273,5.44413535883638,6.70373719960675,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0.52091337055676,0.279182999001381,1.12552522006336,0.45839474333043,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.593768556259299,0.693941307064543,1.52232739156071,0.691846491768175,0.904335843315735,1.17588707135705,0.376999773989026,2.22475470960936,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0.611036183101898,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,1.39323986772945,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.983821158737019,0.308534225774757,0.465067889500816,1.60964040839772,2.80236821681207,1.31647879930784,3.2833492815819,2.67527071501324,2.77779976108131,1.3173006917463,2.14730270016595,0,0.205809224758569,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0,0.444756087689741,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.216138049874694,0,1.32767530667157,1.02823661348756,3.38123207019241,0.814605311381257,1.93952487167626,0.701358198903186,1.83385957660346,0.738050739898011,0.784993639206874,0.740382983530803,0,0.333690211432188,0.982794975566015,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0,1.13694847062291,1.14075483509418,1.01847051465113,0,0.670025029767263,0.714130922658041,0.780534591431195,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0,3.40656204499845,0.35613120733451,0.325773918707152,6.92874516484649,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0,0.535106452806212,0.822745103010605,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.361877549568935,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0.619160603889667,0,0.565105371014073,0,0,0,0,0.138199973804424,0.954670618015114,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.41326727862668,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0.992750942742586,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0.79472541912506,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,8.88672132548076,1.12609485270709,3.47988086107804,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,0,0.252697211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| ||
|EntrezGene=17540 | |||
|HGNC= | |||
|UniProt=Q9WUX5,E9QM31 | |||
|association_with_transcript=-11bp_to_ENSMUST00000005751,ENSMUST00000106675_5end | |||
|description=CAGE_peak_2_at_Mrvi1_5end | |||
|id=chr7:118125986..118125997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,7.47e-09,3;CL:0000737,7.47e-09,3;CL:0000746,7.47e-09,3;CL:0000513,7.47e-09,3;CL:0000680,3.16e-07,6;CL:0000187,3.16e-07,6;CL:0000056,3.16e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.35e-11!23;UBERON:0001009!6.35e-11!23;UBERON:0007100!8.24e-10!18;UBERON:0000948!8.24e-10!18;UBERON:0005498!8.24e-10!18;UBERON:0004140!8.24e-10!18;UBERON:0009881!8.24e-10!18;UBERON:0004141!8.24e-10!18;UBERON:0003084!8.24e-10!18;UBERON:0007005!8.24e-10!18;UBERON:0004139!8.24e-10!18;UBERON:0004291!8.24e-10!18;UBERON:0003103!1.06e-09!43;UBERON:0004872!1.26e-08!33;UBERON:0003914!1.40e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.14e-15,18;UBERON:0000948,8.14e-15,18;UBERON:0005498,8.14e-15,18;UBERON:0004140,8.14e-15,18;UBERON:0009881,8.14e-15,18;UBERON:0004141,8.14e-15,18;UBERON:0003084,8.14e-15,18;UBERON:0007005,8.14e-15,18;UBERON:0004139,8.14e-15,18;UBERON:0004291,8.14e-15,18;UBERON:0004535,3.07e-13,23;UBERON:0001009,3.07e-13,23;UBERON:0003103,8.34e-13,43;UBERON:0004872,2.05e-08,33;UBERON:0003914,3.59e-07,47;UBERON:0000474,6.58e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,1.65192076945513,2.34717403304412,0,0.219686182734472,0,0,0,0,0,0,6.17422646486273,5.44413535883638,6.70373719960675,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0.52091337055676,0.279182999001381,1.12552522006336,0.45839474333043,0.294628585473668,0.284743361598206,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.593768556259299,0.693941307064543,1.52232739156071,0.691846491768175,0.904335843315735,1.17588707135705,0.376999773989026,2.22475470960936,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0.611036183101898,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,1.39323986772945,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.983821158737019,0.308534225774757,0.465067889500816,1.60964040839772,2.80236821681207,1.31647879930784,3.2833492815819,2.67527071501324,2.77779976108131,1.3173006917463,2.14730270016595,0,0.205809224758569,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0,0.444756087689741,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.216138049874694,0,1.32767530667157,1.02823661348756,3.38123207019241,0.814605311381257,1.93952487167626,0.701358198903186,1.83385957660346,0.738050739898011,0.784993639206874,0.740382983530803,0,0.333690211432188,0.982794975566015,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,0,0,1.13694847062291,1.14075483509418,1.01847051465113,0,0.670025029767263,0.714130922658041,0.780534591431195,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0,3.40656204499845,0.35613120733451,0.325773918707152,6.92874516484649,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0,0.535106452806212,0.822745103010605,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0,0.361877549568935,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0.619160603889667,0,0.565105371014073,0,0,0,0,0.138199973804424,0.954670618015114,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.41326727862668,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0.992750942742586,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0,0.179026695667481,0.79472541912506,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,8.88672132548076,1.12609485270709,3.47988086107804,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.640251524048693,0.574354689556133,0,0.347652977834566,0,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.365855945745545,0,0.679020569229309,1.12228454331548,0.355905054372522,0.886540341380071,0,0.309873682371932,0.964533054905707,0,0.701794825336225,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Mrvi1 | |||
}} |
Revision as of 11:29, 14 September 2013
Short description: | p2@Mrvi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mrvi1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENSMUST00000005751, ENSMUST00000106675_5end |
EntrezGene: | Mrvi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 7.47e-09 | 3 |
striated muscle cell | 7.47e-09 | 3 |
cardiac muscle cell | 7.47e-09 | 3 |
cardiac muscle myoblast | 7.47e-09 | 3 |
muscle precursor cell | 3.16e-07 | 6 |
muscle cell | 3.16e-07 | 6 |
myoblast | 3.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.14e-15 | 18 |
heart | 8.14e-15 | 18 |
primitive heart tube | 8.14e-15 | 18 |
primary heart field | 8.14e-15 | 18 |
anterior lateral plate mesoderm | 8.14e-15 | 18 |
heart tube | 8.14e-15 | 18 |
heart primordium | 8.14e-15 | 18 |
cardiac mesoderm | 8.14e-15 | 18 |
cardiogenic plate | 8.14e-15 | 18 |
heart rudiment | 8.14e-15 | 18 |
cardiovascular system | 3.07e-13 | 23 |
circulatory system | 3.07e-13 | 23 |
compound organ | 8.34e-13 | 43 |
splanchnic layer of lateral plate mesoderm | 2.05e-08 | 33 |
epithelial tube | 3.59e-07 | 47 |
female reproductive system | 6.58e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.