FFCP PHASE1:Mm9::chr7:117009151..117009166,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56788|HGNC=|MCL_coexpression_id=32|UniProt=Q9JJS0,D3YVN5,D3YVM9|association_with_transcript=26bp_to_ENSMUST00000007423,ENSMUST00000106728,ENSMUST00000106729,NM_020052,uc009jei.2,uc009jej.2_5end|description=CAGE_peak_1_at_Scube2_5end|id=chr7:117009151..117009166,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.02e-07!14;UBERON:0000117!4.02e-07!14;UBERON:0000171!4.02e-07!14;UBERON:0000170!4.02e-07!14;UBERON:0005597!4.02e-07!14;UBERON:0000118!4.02e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.93e-08,14;UBERON:0000117,9.93e-08,14;UBERON:0000171,9.93e-08,14;UBERON:0000170,9.93e-08,14;UBERON:0005597,9.93e-08,14;UBERON:0000118,9.93e-08,14;UBERON:0005153,4.89e-07,17|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,9.52546010189447,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0.573066879877513,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0,0,0.856952953211411,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,0.614426133024974,0.791317726381163,1.46380229763855,0.52091337055676,0.279182999001381,0,1.83357897332172,0.294628585473668,1.70846016958924,1.3047961207771,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.461230994512117,0,0.470354828542819,0.251333182659351,1.23597483867187,0,0,6.63244084784378,1.32504911076236,0.969750506270444,1.86391761218122,0,0,1.27728527604296,0,0,0,1.3481157546434,0.457500602818626,0,0.521472960576829,1.02286182932132,1.24672826735736,2.10913641988085,0.509196819251581,1.24406970610093,0.252722758433675,1.05220927943237,1.82168620147785,0.459804208866946,1.98068342785884,0.753524089178575,1.2246569847239,0.768682321709099,0.749613796477831,0.517406741478031,0.215567992932842,1.32374256117473,2.28736461413134,4.16471891612392,2.78047249225598,3.48252166522167,2.67516777330327,0,0,0,0,3.52113813310353,2.11073453982987,3.06105504483725,2.60419209143731,2.95146347621106,2.00547246753592,1.39520366850245,2.41446061259657,2.91913355917924,2.13927804887525,0.985004784474571,1.4592385718254,0.584799949701329,0.878200461164203,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.403367049246685,1.77902435075896,1.71203063501303,0.949058123089023,0.823494773620054,1.25667604400135,1.59165177632921,1.75467678407208,0,1.94524244887225,3.18626037206988,0,0.228497025219458,2.25415471346161,1.62921062276251,0.775809948670503,1.47285221769669,0.442655759869801,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,18.2905658264939,0.37898282354097,0.488894929326078,0.169745085775188,1.17345124144251,3.68513766371995,10.4739201989846,14.4398899414771,15.6058792665129,18.1601045511995,38.1096897091394,46.0455914351224,44.0346703758034,28.3512154819763,0,0,0,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,3.54850213020672,3.73937767701236,3.4206261464251,4.45419332025846,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.517434735131018,1.07168517515796,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,0.704015124191131,0.63549621259146,7.27743713581374,3.13283880588812,0.968786560175433,1.32688434841943,2.14870219205646,1.14898629821543,2.04036585640896,0.18542530201051,0,0.206386867963223,0.370389054739423,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.418176592028937,0.436725127492355,0.809186078308924,2.23164330458407,0.26175594198403,1.03691978633434,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.911430693907651,1.57289016638566,0,0.864090018773596,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0687883345109,3.00291960721891,2.01466786693992,3.85863082342319,3.00943262421218,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.830298780673413,1.59609949360412,1.53660245178721,3.16038732188782,0.209613162627982,1.47074806760011,1.55572709461131,1.64828045791115,2.56735367673452,1.51618327058278,1.01391719956096,1.13175804831646,1.77918864192777,1.92075457214608,1.60819313075717,2.38146845641537,1.50649623728312,2.31491064556446,1.64834360321323,1.76638704161277,2.40008476669791,2.12970967391205,2.14592570952589,0.581385666529314,1.97629698872194,1.94613598150856,1.82927972872773,0.789209134313529,0.814824683075171,5.05028044491965,2.25406534435931,1.871585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| ||
|EntrezGene=56788 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=Q9JJS0,D3YVN5,D3YVM9 | |||
|association_with_transcript=26bp_to_ENSMUST00000007423,ENSMUST00000106728,ENSMUST00000106729,NM_020052,uc009jei.2,uc009jej.2_5end | |||
|description=CAGE_peak_1_at_Scube2_5end | |||
|id=chr7:117009151..117009166,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!4.02e-07!14;UBERON:0000117!4.02e-07!14;UBERON:0000171!4.02e-07!14;UBERON:0000170!4.02e-07!14;UBERON:0005597!4.02e-07!14;UBERON:0000118!4.02e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.93e-08,14;UBERON:0000117,9.93e-08,14;UBERON:0000171,9.93e-08,14;UBERON:0000170,9.93e-08,14;UBERON:0005597,9.93e-08,14;UBERON:0000118,9.93e-08,14;UBERON:0005153,4.89e-07,17 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,9.52546010189447,4.30545351309199,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0.573066879877513,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0,0,0.856952953211411,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,1.14918604276669,0.614426133024974,0.791317726381163,1.46380229763855,0.52091337055676,0.279182999001381,0,1.83357897332172,0.294628585473668,1.70846016958924,1.3047961207771,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.461230994512117,0,0.470354828542819,0.251333182659351,1.23597483867187,0,0,6.63244084784378,1.32504911076236,0.969750506270444,1.86391761218122,0,0,1.27728527604296,0,0,0,1.3481157546434,0.457500602818626,0,0.521472960576829,1.02286182932132,1.24672826735736,2.10913641988085,0.509196819251581,1.24406970610093,0.252722758433675,1.05220927943237,1.82168620147785,0.459804208866946,1.98068342785884,0.753524089178575,1.2246569847239,0.768682321709099,0.749613796477831,0.517406741478031,0.215567992932842,1.32374256117473,2.28736461413134,4.16471891612392,2.78047249225598,3.48252166522167,2.67516777330327,0,0,0,0,3.52113813310353,2.11073453982987,3.06105504483725,2.60419209143731,2.95146347621106,2.00547246753592,1.39520366850245,2.41446061259657,2.91913355917924,2.13927804887525,0.985004784474571,1.4592385718254,0.584799949701329,0.878200461164203,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.403367049246685,1.77902435075896,1.71203063501303,0.949058123089023,0.823494773620054,1.25667604400135,1.59165177632921,1.75467678407208,0,1.94524244887225,3.18626037206988,0,0.228497025219458,2.25415471346161,1.62921062276251,0.775809948670503,1.47285221769669,0.442655759869801,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,18.2905658264939,0.37898282354097,0.488894929326078,0.169745085775188,1.17345124144251,3.68513766371995,10.4739201989846,14.4398899414771,15.6058792665129,18.1601045511995,38.1096897091394,46.0455914351224,44.0346703758034,28.3512154819763,0,0,0,0,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,3.54850213020672,3.73937767701236,3.4206261464251,4.45419332025846,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0.517434735131018,1.07168517515796,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,0.704015124191131,0.63549621259146,7.27743713581374,3.13283880588812,0.968786560175433,1.32688434841943,2.14870219205646,1.14898629821543,2.04036585640896,0.18542530201051,0,0.206386867963223,0.370389054739423,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.418176592028937,0.436725127492355,0.809186078308924,2.23164330458407,0.26175594198403,1.03691978633434,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.911430693907651,1.57289016638566,0,0.864090018773596,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0687883345109,3.00291960721891,2.01466786693992,3.85863082342319,3.00943262421218,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.830298780673413,1.59609949360412,1.53660245178721,3.16038732188782,0.209613162627982,1.47074806760011,1.55572709461131,1.64828045791115,2.56735367673452,1.51618327058278,1.01391719956096,1.13175804831646,1.77918864192777,1.92075457214608,1.60819313075717,2.38146845641537,1.50649623728312,2.31491064556446,1.64834360321323,1.76638704161277,2.40008476669791,2.12970967391205,2.14592570952589,0.581385666529314,1.97629698872194,1.94613598150856,1.82927972872773,0.789209134313529,0.814824683075171,5.05028044491965,2.25406534435931,1.87158516513571,0.818462086339379,2.01417893541756,2.12197272079256,1.49886346762768,5.6143586026898,5.15690529715916,6.12122662620299,3.08827986767322,3.70988536992674 | |||
|short_description=p1@Scube2 | |||
}} |
Revision as of 11:27, 14 September 2013
Short description: | p1@Scube2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scube2_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 26bp_to_ENSMUST00000007423, ENSMUST00000106728, ENSMUST00000106729, NM_020052, uc009jei.2, uc009jej.2_5end |
EntrezGene: | Scube2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 9.93e-08 | 14 |
respiratory tube | 9.93e-08 | 14 |
respiration organ | 9.93e-08 | 14 |
pair of lungs | 9.93e-08 | 14 |
lung primordium | 9.93e-08 | 14 |
lung bud | 9.93e-08 | 14 |
epithelial bud | 4.89e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.