FFCP PHASE1:Mm9::chr7:107855287..107855299,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319604|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGZ2,Q68FE1|association_with_transcript=71bp_to_ENSMUST00000049053,NM_178764,uc009inq.1,uc009inr.1,uc009ins.1_5end|description=CAGE_peak_4_at_Fam168a_5end|id=chr7:107855287..107855299,+|ontology_enrichment_celltype=CL:0000393!4.76e-17!39;CL:0000211!4.76e-17!39;CL:0000540!1.55e-16!33;CL:0000047!1.55e-16!33;CL:0000031!1.55e-16!33;CL:0000404!1.55e-16!33;CL:0000117!4.01e-13!23;CL:0000337!4.01e-13!23;CL:0002319!1.27e-12!43;CL:0000055!1.29e-12!50;CL:0000221!2.83e-12!44;CL:0000133!2.83e-12!44|ontology_enrichment_celltype_v019_2=CL:0000393,5.74e-18,39;CL:0000211,5.74e-18,39;CL:0000540,2.00e-17,33;CL:0000047,2.00e-17,33;CL:0000031,2.00e-17,33;CL:0000404,2.00e-17,33;CL:0000117,8.27e-14,23;CL:0000337,8.27e-14,23;CL:0002319,3.52e-13,43;CL:0000221,8.16e-13,44;CL:0000133,8.16e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.33e-29!73;UBERON:0005743!3.33e-29!73;UBERON:0000073!1.46e-28!75;UBERON:0001016!1.46e-28!75;UBERON:0004121!7.30e-26!102;UBERON:0000924!7.30e-26!102;UBERON:0006601!7.30e-26!102;UBERON:0002346!6.54e-25!71;UBERON:0003075!6.54e-25!71;UBERON:0007284!6.54e-25!71;UBERON:0001049!1.99e-22!52;UBERON:0005068!1.99e-22!52;UBERON:0006241!1.99e-22!52;UBERON:0007135!1.99e-22!52;UBERON:0000033!3.86e-21!63;UBERON:0000955!1.01e-20!50;UBERON:0006238!1.01e-20!50;UBERON:0002616!3.92e-20!49;UBERON:0003056!6.72e-19!49;UBERON:0002020!2.36e-18!34;UBERON:0003080!3.63e-17!40;UBERON:0002780!1.37e-16!39;UBERON:0001890!1.37e-16!39;UBERON:0006240!1.37e-16!39;UBERON:0002791!2.62e-15!29;UBERON:0003528!2.62e-15!29;UBERON:0001893!2.62e-15!29;UBERON:0000956!3.09e-11!21;UBERON:0001869!3.09e-11!21;UBERON:0000203!3.09e-11!21;UBERON:0000025!3.85e-10!114;UBERON:0002619!2.94e-09!17;UBERON:0000153!3.75e-09!94;UBERON:0004111!3.82e-09!122;UBERON:0007811!8.91e-09!86;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0000468!3.45e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.98e-31,73;UBERON:0001016,4.74e-30,75;UBERON:0002346,5.84e-27,64;UBERON:0003075,5.84e-27,64;UBERON:0007284,5.84e-27,64;UBERON:0004121,1.85e-26,95;UBERON:0000924,1.85e-26,95;UBERON:0006601,1.85e-26,95;UBERON:0000073,3.09e-24,54;UBERON:0010314,1.13e-23,92;UBERON:0001049,2.73e-23,52;UBERON:0005068,2.73e-23,52;UBERON:0006241,2.73e-23,52;UBERON:0007135,2.73e-23,52;UBERON:0010371,1.13e-22,73;UBERON:0000955,5.28e-20,47;UBERON:0006238,5.28e-20,47;UBERON:0003056,1.42e-19,49;UBERON:0002616,2.16e-19,46;UBERON:0002020,6.07e-19,34;UBERON:0003080,9.98e-18,40;UBERON:0002780,4.06e-17,39;UBERON:0001890,4.06e-17,39;UBERON:0006240,4.06e-17,39;UBERON:0003528,1.00e-15,29;UBERON:0002791,1.00e-15,29;UBERON:0001893,1.00e-15,29;UBERON:0000956,2.01e-11,21;UBERON:0001869,2.01e-11,21;UBERON:0000203,2.01e-11,21;UBERON:0000025,1.60e-09,114;UBERON:0002619,2.48e-09,17;UBERON:0002021,1.40e-08,10;UBERON:0000411,1.40e-08,10;UBERON:0001950,1.40e-08,10;UBERON:0004111,1.52e-08,122|phase1_expression=2.7225304007815,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,2.04103896362567,1.09220046320974,0.783599367416806,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,3.04130793658544,2.0190142737785,1.56478268869608,1.30815093828268,0.878744730937887,1.36100929351998,1.25987779462826,0,0,0,0,4.63066984864705,2.29226751951005,3.6097046459421,11.1274053472779,8.46385566835253,12.6766280701236,2.03306719241479,0.889294796111139,0,0,0.7104801149461,2.39680088414724,2.30530983192933,6.11768712620018,6.61529097825284,6.09942387919008,9.42648248532552,9.93908434282261,7.22695715368229,6.03826467414889,10.1114066527102,3.30347642998166,8.42736431362239,8.1411462625809,9.62769900430415,9.78917786545783,7.29278718779464,6.70039197603314,6.75315132038016,6.41752640662602,10.3120004915784,9.25415925194169,9.50637173709033,1.36307147999731,1.5870027622425,0.579728977403356,0,0,0,0,0,0.140444420131752,2.21559419351475,1.81850203222008,1.7666978725517,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.45673551887624,1.29468941823586,1.7813056687779,1.56136794089522,2.13125834818499,1.84492397804847,1.80867168663147,3.05730638552832,1.50799909595611,0.988779870937496,0.86759614151947,0.884610551949874,1.94120219936891,0.220841518460394,1.45462575940567,0,10.5401086924157,10.4723353406728,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,9.13722900369418,8.6925114535539,4.52355667606312,14.7750672163435,14.3200656104985,9.55825004973976,6.65189178577806,3.46253837091075,0.746441823660558,0.505445516867349,1.47309299120532,2.47228841629137,1.83921683546778,4.50155324513373,3.16480117455002,5.17077393550092,5.25266253167884,5.80950692270319,3.62184719034622,2.80238390812695,3.78212160335639,3.69497360744293,2.19195732427575,1.11218899690239,2.43776516565517,0.411564272815887,3.18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| ||
|EntrezGene=319604 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BGZ2,Q68FE1 | |||
|association_with_transcript=71bp_to_ENSMUST00000049053,NM_178764,uc009inq.1,uc009inr.1,uc009ins.1_5end | |||
|description=CAGE_peak_4_at_Fam168a_5end | |||
|id=chr7:107855287..107855299,+ | |||
|ontology_enrichment_celltype=CL:0000393!4.76e-17!39;CL:0000211!4.76e-17!39;CL:0000540!1.55e-16!33;CL:0000047!1.55e-16!33;CL:0000031!1.55e-16!33;CL:0000404!1.55e-16!33;CL:0000117!4.01e-13!23;CL:0000337!4.01e-13!23;CL:0002319!1.27e-12!43;CL:0000055!1.29e-12!50;CL:0000221!2.83e-12!44;CL:0000133!2.83e-12!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.74e-18,39;CL:0000211,5.74e-18,39;CL:0000540,2.00e-17,33;CL:0000047,2.00e-17,33;CL:0000031,2.00e-17,33;CL:0000404,2.00e-17,33;CL:0000117,8.27e-14,23;CL:0000337,8.27e-14,23;CL:0002319,3.52e-13,43;CL:0000221,8.16e-13,44;CL:0000133,8.16e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.33e-29!73;UBERON:0005743!3.33e-29!73;UBERON:0000073!1.46e-28!75;UBERON:0001016!1.46e-28!75;UBERON:0004121!7.30e-26!102;UBERON:0000924!7.30e-26!102;UBERON:0006601!7.30e-26!102;UBERON:0002346!6.54e-25!71;UBERON:0003075!6.54e-25!71;UBERON:0007284!6.54e-25!71;UBERON:0001049!1.99e-22!52;UBERON:0005068!1.99e-22!52;UBERON:0006241!1.99e-22!52;UBERON:0007135!1.99e-22!52;UBERON:0000033!3.86e-21!63;UBERON:0000955!1.01e-20!50;UBERON:0006238!1.01e-20!50;UBERON:0002616!3.92e-20!49;UBERON:0003056!6.72e-19!49;UBERON:0002020!2.36e-18!34;UBERON:0003080!3.63e-17!40;UBERON:0002780!1.37e-16!39;UBERON:0001890!1.37e-16!39;UBERON:0006240!1.37e-16!39;UBERON:0002791!2.62e-15!29;UBERON:0003528!2.62e-15!29;UBERON:0001893!2.62e-15!29;UBERON:0000956!3.09e-11!21;UBERON:0001869!3.09e-11!21;UBERON:0000203!3.09e-11!21;UBERON:0000025!3.85e-10!114;UBERON:0002619!2.94e-09!17;UBERON:0000153!3.75e-09!94;UBERON:0004111!3.82e-09!122;UBERON:0007811!8.91e-09!86;UBERON:0002021!3.47e-08!10;UBERON:0000411!3.47e-08!10;UBERON:0001950!3.47e-08!10;UBERON:0000468!3.45e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.98e-31,73;UBERON:0001016,4.74e-30,75;UBERON:0002346,5.84e-27,64;UBERON:0003075,5.84e-27,64;UBERON:0007284,5.84e-27,64;UBERON:0004121,1.85e-26,95;UBERON:0000924,1.85e-26,95;UBERON:0006601,1.85e-26,95;UBERON:0000073,3.09e-24,54;UBERON:0010314,1.13e-23,92;UBERON:0001049,2.73e-23,52;UBERON:0005068,2.73e-23,52;UBERON:0006241,2.73e-23,52;UBERON:0007135,2.73e-23,52;UBERON:0010371,1.13e-22,73;UBERON:0000955,5.28e-20,47;UBERON:0006238,5.28e-20,47;UBERON:0003056,1.42e-19,49;UBERON:0002616,2.16e-19,46;UBERON:0002020,6.07e-19,34;UBERON:0003080,9.98e-18,40;UBERON:0002780,4.06e-17,39;UBERON:0001890,4.06e-17,39;UBERON:0006240,4.06e-17,39;UBERON:0003528,1.00e-15,29;UBERON:0002791,1.00e-15,29;UBERON:0001893,1.00e-15,29;UBERON:0000956,2.01e-11,21;UBERON:0001869,2.01e-11,21;UBERON:0000203,2.01e-11,21;UBERON:0000025,1.60e-09,114;UBERON:0002619,2.48e-09,17;UBERON:0002021,1.40e-08,10;UBERON:0000411,1.40e-08,10;UBERON:0001950,1.40e-08,10;UBERON:0004111,1.52e-08,122 | |||
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| |||
|short_description=p4@Fam168a | |||
}} |
Revision as of 11:16, 14 September 2013
Short description: | p4@Fam168a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam168a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 71bp_to_ENSMUST00000049053, NM_178764, uc009inq.1, uc009inr.1, uc009ins.1_5end |
EntrezGene: | Fam168a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.74e-18 | 39 |
electrically active cell | 5.74e-18 | 39 |
neuron | 2.00e-17 | 33 |
neuronal stem cell | 2.00e-17 | 33 |
neuroblast | 2.00e-17 | 33 |
electrically signaling cell | 2.00e-17 | 33 |
CNS neuron (sensu Vertebrata) | 8.27e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.27e-14 | 23 |
neural cell | 3.52e-13 | 43 |
ectodermal cell | 8.16e-13 | 44 |
neurectodermal cell | 8.16e-13 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.