FFCP PHASE1:Mm9::chr7:107805473..107805499,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27276|HGNC=|MCL_coexpression_id=20|UniProt=Q9QYE9,Q3TP62|association_with_transcript=0bp_to_ENSMUST00000107045,NM_001163186,NM_001163187,uc009ink.2,uc009inl.2_5end|description=CAGE_peak_4_at_Plekhb1_5end|id=chr7:107805473..107805499,-|ontology_enrichment_celltype=CL:0000221!1.44e-13!44;CL:0000133!1.44e-13!44;CL:0002319!5.90e-13!43;CL:0000055!6.25e-11!50;CL:0000540!5.85e-09!33;CL:0000047!5.85e-09!33;CL:0000031!5.85e-09!33;CL:0000404!5.85e-09!33;CL:0000393!1.05e-07!39;CL:0000211!1.05e-07!39;CL:0000107!4.05e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,6.19e-22,44;CL:0000133,6.19e-22,44;CL:0002319,7.99e-21,43;CL:0000540,3.83e-13,33;CL:0000047,3.83e-13,33;CL:0000031,3.83e-13,33;CL:0000404,3.83e-13,33;CL:0000107,6.60e-12,9;CL:0002321,2.73e-11,70;CL:0000393,3.01e-11,39;CL:0000211,3.01e-11,39;CL:0000333,3.77e-09,10;CL:0000095,3.77e-09,10;CL:0000243,3.77e-09,10;CL:0000123,3.77e-09,10;CL:0000125,3.77e-09,10;CL:0000030,3.77e-09,10;CL:0000339,3.77e-09,10;CL:0002453,2.24e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.05e-32!102;UBERON:0000924!2.05e-32!102;UBERON:0006601!2.05e-32!102;UBERON:0000073!8.71e-26!75;UBERON:0001016!8.71e-26!75;UBERON:0001017!1.32e-24!73;UBERON:0005743!1.32e-24!73;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0000033!5.03e-18!63;UBERON:0001049!2.92e-14!52;UBERON:0005068!2.92e-14!52;UBERON:0006241!2.92e-14!52;UBERON:0007135!2.92e-14!52;UBERON:0000955!6.45e-14!50;UBERON:0006238!6.45e-14!50;UBERON:0002616!2.33e-13!49;UBERON:0003056!3.77e-11!49;UBERON:0002020!1.08e-10!34;UBERON:0007811!3.00e-10!86;UBERON:0000153!3.03e-09!94;UBERON:0003080!5.34e-09!40;UBERON:0002791!1.50e-08!29;UBERON:0003528!1.50e-08!29;UBERON:0001893!1.50e-08!29;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0000010!4.51e-08!11;UBERON:0002410!4.05e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.29e-42,95;UBERON:0000924,2.29e-42,95;UBERON:0006601,2.29e-42,95;UBERON:0001016,3.76e-39,75;UBERON:0001017,4.62e-37,73;UBERON:0010371,7.63e-27,73;UBERON:0002346,1.25e-24,64;UBERON:0003075,1.25e-24,64;UBERON:0007284,1.25e-24,64;UBERON:0000073,4.80e-21,54;UBERON:0001049,1.01e-18,52;UBERON:0005068,1.01e-18,52;UBERON:0006241,1.01e-18,52;UBERON:0007135,1.01e-18,52;UBERON:0010314,1.54e-16,92;UBERON:0000955,3.14e-15,47;UBERON:0006238,3.14e-15,47;UBERON:0002616,2.40e-14,46;UBERON:0002020,4.96e-14,34;UBERON:0000010,1.13e-13,11;UBERON:0003056,1.00e-12,49;UBERON:0002410,6.60e-12,9;UBERON:0003076,5.94e-11,12;UBERON:0003057,5.94e-11,12;UBERON:0002021,6.85e-11,10;UBERON:0000411,6.85e-11,10;UBERON:0001950,6.85e-11,10;UBERON:0003528,6.92e-11,29;UBERON:0002791,6.92e-11,29;UBERON:0001893,6.92e-11,29;UBERON:0003080,4.05e-10,40;UBERON:0002619,7.54e-10,17;UBERON:0002780,3.36e-09,39;UBERON:0001890,3.36e-09,39;UBERON:0006240,3.36e-09,39;UBERON:0000956,7.26e-09,21;UBERON:0001869,7.26e-09,21;UBERON:0000203,7.26e-09,21;UBERON:0002950,3.17e-07,4;UBERON:0001891,3.17e-07,4;UBERON:0009616,3.17e-07,4;UBERON:0010286,3.17e-07,4;UBERON:0011216,4.64e-07,194;UBERON:0005085,6.66e-07,13|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,7.63088047331563,5.4921545683618,6.9994763666742,5.03951117851305,15.8127820801469,0,0,0,1.80081605225163,0.286533439938757,0,0.202316460859598,0,0,0,2.66788438833342,0,0,0,17.0772062995491,38.806048837477,0,0.135005938331691,0,29.9933533623994,27.6085676189517,0,0.191690942036473,0,75.9799578895782,68.8234752279162,79.8753972932466,0.263772575460388,0.274462930807229,0.52091337055676,91.8512066714543,49.5231096827878,67.9952202606805,7.07108605136802,6.97621235915604,0.186399445825301,4.54357159999104,8.08615693142605,0,0,0,0,0,0,2.52799956237153,0,0,0,19.9997656082886,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.705532242814229,0,0,0,0,0.323533699894818,0.883366073841574,0,0,19.9090941967852,28.4847521266299,0,0,0,0,50.4794454794253,42.0900554593136,0.376963056338593,21.5542157038423,15.0872119824895,49.0379785160562,42.3449696606847,0.203678727700633,0.248813941220186,0,4.62972082950243,0,0.229902104433473,0.540186389416048,1.9591626318643,1.83698547708585,1.5373646434182,2.62364828767241,3.88055056108524,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,25.4450837762594,0.308713837137853,0,0,0,0,0.257734922644187,0,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0,0,0,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| ||
|EntrezGene=27276 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q9QYE9,Q3TP62 | |||
|association_with_transcript=0bp_to_ENSMUST00000107045,NM_001163186,NM_001163187,uc009ink.2,uc009inl.2_5end | |||
|description=CAGE_peak_4_at_Plekhb1_5end | |||
|id=chr7:107805473..107805499,- | |||
|ontology_enrichment_celltype=CL:0000221!1.44e-13!44;CL:0000133!1.44e-13!44;CL:0002319!5.90e-13!43;CL:0000055!6.25e-11!50;CL:0000540!5.85e-09!33;CL:0000047!5.85e-09!33;CL:0000031!5.85e-09!33;CL:0000404!5.85e-09!33;CL:0000393!1.05e-07!39;CL:0000211!1.05e-07!39;CL:0000107!4.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.19e-22,44;CL:0000133,6.19e-22,44;CL:0002319,7.99e-21,43;CL:0000540,3.83e-13,33;CL:0000047,3.83e-13,33;CL:0000031,3.83e-13,33;CL:0000404,3.83e-13,33;CL:0000107,6.60e-12,9;CL:0002321,2.73e-11,70;CL:0000393,3.01e-11,39;CL:0000211,3.01e-11,39;CL:0000333,3.77e-09,10;CL:0000095,3.77e-09,10;CL:0000243,3.77e-09,10;CL:0000123,3.77e-09,10;CL:0000125,3.77e-09,10;CL:0000030,3.77e-09,10;CL:0000339,3.77e-09,10;CL:0002453,2.24e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.05e-32!102;UBERON:0000924!2.05e-32!102;UBERON:0006601!2.05e-32!102;UBERON:0000073!8.71e-26!75;UBERON:0001016!8.71e-26!75;UBERON:0001017!1.32e-24!73;UBERON:0005743!1.32e-24!73;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0000033!5.03e-18!63;UBERON:0001049!2.92e-14!52;UBERON:0005068!2.92e-14!52;UBERON:0006241!2.92e-14!52;UBERON:0007135!2.92e-14!52;UBERON:0000955!6.45e-14!50;UBERON:0006238!6.45e-14!50;UBERON:0002616!2.33e-13!49;UBERON:0003056!3.77e-11!49;UBERON:0002020!1.08e-10!34;UBERON:0007811!3.00e-10!86;UBERON:0000153!3.03e-09!94;UBERON:0003080!5.34e-09!40;UBERON:0002791!1.50e-08!29;UBERON:0003528!1.50e-08!29;UBERON:0001893!1.50e-08!29;UBERON:0002780!2.10e-08!39;UBERON:0001890!2.10e-08!39;UBERON:0006240!2.10e-08!39;UBERON:0000010!4.51e-08!11;UBERON:0002410!4.05e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.29e-42,95;UBERON:0000924,2.29e-42,95;UBERON:0006601,2.29e-42,95;UBERON:0001016,3.76e-39,75;UBERON:0001017,4.62e-37,73;UBERON:0010371,7.63e-27,73;UBERON:0002346,1.25e-24,64;UBERON:0003075,1.25e-24,64;UBERON:0007284,1.25e-24,64;UBERON:0000073,4.80e-21,54;UBERON:0001049,1.01e-18,52;UBERON:0005068,1.01e-18,52;UBERON:0006241,1.01e-18,52;UBERON:0007135,1.01e-18,52;UBERON:0010314,1.54e-16,92;UBERON:0000955,3.14e-15,47;UBERON:0006238,3.14e-15,47;UBERON:0002616,2.40e-14,46;UBERON:0002020,4.96e-14,34;UBERON:0000010,1.13e-13,11;UBERON:0003056,1.00e-12,49;UBERON:0002410,6.60e-12,9;UBERON:0003076,5.94e-11,12;UBERON:0003057,5.94e-11,12;UBERON:0002021,6.85e-11,10;UBERON:0000411,6.85e-11,10;UBERON:0001950,6.85e-11,10;UBERON:0003528,6.92e-11,29;UBERON:0002791,6.92e-11,29;UBERON:0001893,6.92e-11,29;UBERON:0003080,4.05e-10,40;UBERON:0002619,7.54e-10,17;UBERON:0002780,3.36e-09,39;UBERON:0001890,3.36e-09,39;UBERON:0006240,3.36e-09,39;UBERON:0000956,7.26e-09,21;UBERON:0001869,7.26e-09,21;UBERON:0000203,7.26e-09,21;UBERON:0002950,3.17e-07,4;UBERON:0001891,3.17e-07,4;UBERON:0009616,3.17e-07,4;UBERON:0010286,3.17e-07,4;UBERON:0011216,4.64e-07,194;UBERON:0005085,6.66e-07,13 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,7.63088047331563,5.4921545683618,6.9994763666742,5.03951117851305,15.8127820801469,0,0,0,1.80081605225163,0.286533439938757,0,0.202316460859598,0,0,0,2.66788438833342,0,0,0,17.0772062995491,38.806048837477,0,0.135005938331691,0,29.9933533623994,27.6085676189517,0,0.191690942036473,0,75.9799578895782,68.8234752279162,79.8753972932466,0.263772575460388,0.274462930807229,0.52091337055676,91.8512066714543,49.5231096827878,67.9952202606805,7.07108605136802,6.97621235915604,0.186399445825301,4.54357159999104,8.08615693142605,0,0,0,0,0,0,2.52799956237153,0,0,0,19.9997656082886,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.705532242814229,0,0,0,0,0.323533699894818,0.883366073841574,0,0,19.9090941967852,28.4847521266299,0,0,0,0,50.4794454794253,42.0900554593136,0.376963056338593,21.5542157038423,15.0872119824895,49.0379785160562,42.3449696606847,0.203678727700633,0.248813941220186,0,4.62972082950243,0,0.229902104433473,0.540186389416048,1.9591626318643,1.83698547708585,1.5373646434182,2.62364828767241,3.88055056108524,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,25.4450837762594,0.308713837137853,0,0,0,0,0.257734922644187,0,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0,0,0,2.95058563811422,7.72622889653251,83.9679585636152,84.8612610927551,0,0.757412781613119,12.9358369960665,9.76096860741596,16.3721782276927,27.4814117645435,34.7565931568535,20.3815102167959,21.0501564870945,17.2430956167674,13.8350722281283,12.5315313404505,0,0,0.488660878060728,0,0,0,0,0.377210159511796,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0,0.882113592219848,0.32977250588296,0.322928853391811,0.301564624640779,0.238744688006273,1.14898629821543,0,102.354766709801,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0,0.655087691238533,0.404593039154462,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.632022241256357,0,0.102710957164827,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0,0,0,0.214368379079066,1.00314420807073,6.7770221114048,5.06357760157895,5.72895513439397,2.92150409984269,13.0165678756422,12.0863023582352,10.8003600037089,10.8077088773813,8.60970577069989,5.69536342927002,0.103787347584177,0.798049746802062,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.256100609619477,0.34461281373368,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0,0.271608227691724,0.561142271657738,0.474540072496697,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.999242311751784,1.63752125911786,1.28922632428979,0.57386499620653,4.41182838239031,1.39120701372253 | |||
|short_description=p4@Plekhb1 | |||
}} |
Revision as of 11:16, 14 September 2013
Short description: | p4@Plekhb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Plekhb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000107045, NM_001163186, NM_001163187, uc009ink.2, uc009inl.2_5end |
EntrezGene: | Plekhb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.19e-22 | 44 |
neurectodermal cell | 6.19e-22 | 44 |
neural cell | 7.99e-21 | 43 |
neuron | 3.83e-13 | 33 |
neuronal stem cell | 3.83e-13 | 33 |
neuroblast | 3.83e-13 | 33 |
electrically signaling cell | 3.83e-13 | 33 |
autonomic neuron | 6.60e-12 | 9 |
embryonic cell | 2.73e-11 | 70 |
electrically responsive cell | 3.01e-11 | 39 |
electrically active cell | 3.01e-11 | 39 |
migratory neural crest cell | 3.77e-09 | 10 |
neuron associated cell | 3.77e-09 | 10 |
glial cell (sensu Vertebrata) | 3.77e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.77e-09 | 10 |
glial cell | 3.77e-09 | 10 |
glioblast | 3.77e-09 | 10 |
glioblast (sensu Vertebrata) | 3.77e-09 | 10 |
oligodendrocyte precursor cell | 2.24e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.