FFCP PHASE1:Hg19::chrX:129244499..129244506,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3319|TSSclassifier=S|UniProt=Q99607|association_with_transcript=-24bp_to_NM_001421,uc004evd.3_5end|description=CAGE_peak_7_at_ELF4_5end|id=chrX:129244499..129244506,-|ontology_enrichment_celltype=CL:0000066!1.05e-09!254;CL:0000012!1.47e-09!682;CL:0000548!4.60e-09!679;CL:0000004!4.60e-09!679;CL:0000255!4.60e-09!679;CL:0000063!6.12e-07!578;CL:0000003!8.59e-07!722|ontology_enrichment_celltype_v019=CL:0000349;2.09e-09;19!CL:0002541;1.73e-07;3!CL:0002577;5.58e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-09,19;CL:0002577,9.38e-08,3;CL:0000066,2.61e-07,253;CL:0002541,5.51e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!5.40e-08!14;UBERON:0000158!5.40e-08!14|ontology_enrichment_uberon_v019=UBERON:0005631;7.56e-10;10!UBERON:0000158;7.56e-10;10!UBERON:0003124;1.73e-07;3!UBERON:0000920;1.73e-07;3!UBERON:0000478;5.18e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.75e-14,14;UBERON:0000158,5.75e-14,14;UBERON:0003124,4.41e-11,7;UBERON:0000478,3.12e-07,24;UBERON:0000920,5.51e-07,3;UBERON:0004923,6.49e-07,66;UBERON:0004871,8.80e-07,8|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,1.31064823278103,0.791300934685361,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.408001382488506,0,0,0.273748850145768,0,0,0.0821005894499457,0.314843125254717,0.393364276848904,0.383829398097213,0.619264493264304,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0.553995408531877,0,0.217010870715852,0,0.32389366601898,0,0.436194716338694,1.13362783106643,0,0,0.411167888021826,0,0.575384784644301,1.0246428261164,0.236482229888585,0.344745680736619,1.29096936716765,0,0.752969358170419,0,0,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.50749199154046,0.521482918420201,0.434377689410233,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0.419317291016752,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,0,0.590129310341499,0,0.616804496998528,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0.812411591295047,0.384273959177026,0.780356085359269,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,1.06976078313403,0.289648807765598,0,0.670700859703636,0,0.722878304769133,0.50133791063589,0,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.351339142772504,0.261958150995425,2.18577172975525,0,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0,0.419499436209906,0.550236083880135,1.46296476575767,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0.446498641420399,0.22452937262617,0.563057402416611,1.53316637465883,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0.264818361626438,0.573673241497627,0,0,1.06748995729705,0.98667019366864,0,0.538842688278752,0.163461903113459,0,0.576175924479999,0.70296429550139,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0.408308342509787,0.737005903870608,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,0.505008341862199,0.125118519871964,0.831192346452549,1.31693286264251,0,0.600952235626387,0.453728732640084,0.538168907066586,1.06778694409284,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0.644349290496095,0.484938170456436,0,0.403008392910561,0.508681776931463,0.57978255948989,1.90922284413584,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0,0,3.12899064659632,0,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.949082476444386,0,0.392442930250692,0.38474715694639,0,1.40241773803446,2.4694440679884,2.94017422771084,0,0,0,0,0.245976877086227,0,0.98775256867763,1.1240175325762,0.703702806881416,0.740707561268237,0.651616610620649,2.07986957055916,0,0.34779121492523,0.352226082707465,1.29929802984966,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0.445893486866185,0,0.503946384596579,0.141775097242386,0.53735113621709,1.16253575405585,0.766765358330422,0,0.264145302039678,0.207328115540772,0.576479813667846,0.50496973370552,0.507983154337352,0.381988425558278,0,3.4214489204541,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.36669142910475,0.646358578788889,0,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,1.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3319 | |||
|TSSclassifier=S | |||
|UniProt=Q99607 | |||
|association_with_transcript=-24bp_to_NM_001421,uc004evd.3_5end | |||
|description=CAGE_peak_7_at_ELF4_5end | |||
|id=chrX:129244499..129244506,- | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-09!254;CL:0000012!1.47e-09!682;CL:0000548!4.60e-09!679;CL:0000004!4.60e-09!679;CL:0000255!4.60e-09!679;CL:0000063!6.12e-07!578;CL:0000003!8.59e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.09e-09;19!CL:0002541;1.73e-07;3!CL:0002577;5.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.07e-09,19;CL:0002577,9.38e-08,3;CL:0000066,2.61e-07,253;CL:0002541,5.51e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.40e-08!14;UBERON:0000158!5.40e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.56e-10;10!UBERON:0000158;7.56e-10;10!UBERON:0003124;1.73e-07;3!UBERON:0000920;1.73e-07;3!UBERON:0000478;5.18e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.75e-14,14;UBERON:0000158,5.75e-14,14;UBERON:0003124,4.41e-11,7;UBERON:0000478,3.12e-07,24;UBERON:0000920,5.51e-07,3;UBERON:0004923,6.49e-07,66;UBERON:0004871,8.80e-07,8 | |||
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| |||
|short_description=p7@ELF4 | |||
}} |
Revision as of 10:42, 14 September 2013
Short description: | p7@ELF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ELF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_NM_001421, uc004evd.3_5end |
EntrezGene: | ELF4 |
HGNC: | 3319 |
UniProt: | Q99607 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.07e-09 | 19 |
placental epithelial cell | 9.38e-08 | 3 |
epithelial cell | 2.61e-07 | 253 |
chorionic membrane mesenchymal stem cell | 5.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.75e-14 | 14 |
membranous layer | 5.75e-14 | 14 |
chorion | 4.41e-11 | 7 |
extraembryonic structure | 3.12e-07 | 24 |
egg chorion | 5.51e-07 | 3 |
organ component layer | 6.49e-07 | 66 |
somatic layer of lateral plate mesoderm | 8.80e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.