FFCP PHASE1:Mm9::chr6:54222760..54222771,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69993|HGNC=|MCL_coexpression_id=786|UniProt=Q3V2R3,Q80XD1|association_with_transcript=-44bp_to_NM_023543,uc009bzt.2_5end|description=CAGE_peak_10_at_Chn2_5end|id=chr6:54222760..54222771,+|ontology_enrichment_celltype=CL:0000107!1.70e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.60e-19,9;CL:0000540,5.17e-16,33;CL:0000047,5.17e-16,33;CL:0000031,5.17e-16,33;CL:0000404,5.17e-16,33;CL:0002319,5.86e-16,43;CL:0000221,1.75e-15,44;CL:0000133,1.75e-15,44;CL:0000393,6.62e-13,39;CL:0000211,6.62e-13,39;CL:0002321,5.77e-08,70;CL:0002610,2.35e-07,3;CL:0002614,5.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0004121!1.06e-13!102;UBERON:0000924!1.06e-13!102;UBERON:0006601!1.06e-13!102;UBERON:0001017!1.77e-13!73;UBERON:0005743!1.77e-13!73;UBERON:0002346!5.27e-10!71;UBERON:0003075!5.27e-10!71;UBERON:0007284!5.27e-10!71;UBERON:0000010!1.10e-09!11;UBERON:0002410!1.70e-08!9;UBERON:0000033!4.43e-08!63;UBERON:0002021!5.45e-08!10;UBERON:0000411!5.45e-08!10;UBERON:0001950!5.45e-08!10;UBERON:0001049!1.42e-07!52;UBERON:0005068!1.42e-07!52;UBERON:0006241!1.42e-07!52;UBERON:0007135!1.42e-07!52;UBERON:0000955!6.21e-07!50;UBERON:0006238!6.21e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.10e-36,75;UBERON:0001017,3.28e-33,73;UBERON:0004121,2.05e-28,95;UBERON:0000924,2.05e-28,95;UBERON:0006601,2.05e-28,95;UBERON:0000010,1.32e-22,11;UBERON:0000073,2.97e-20,54;UBERON:0002346,1.35e-19,64;UBERON:0003075,1.35e-19,64;UBERON:0007284,1.35e-19,64;UBERON:0002410,1.60e-19,9;UBERON:0001049,1.25e-17,52;UBERON:0005068,1.25e-17,52;UBERON:0006241,1.25e-17,52;UBERON:0007135,1.25e-17,52;UBERON:0010371,2.29e-16,73;UBERON:0002616,9.96e-15,46;UBERON:0000955,2.61e-14,47;UBERON:0006238,2.61e-14,47;UBERON:0002020,1.34e-12,34;UBERON:0002021,2.08e-12,10;UBERON:0000411,2.08e-12,10;UBERON:0001950,2.08e-12,10;UBERON:0003080,7.64e-12,40;UBERON:0010314,1.22e-11,92;UBERON:0003528,2.58e-11,29;UBERON:0002791,2.58e-11,29;UBERON:0001893,2.58e-11,29;UBERON:0002780,1.20e-10,39;UBERON:0001890,1.20e-10,39;UBERON:0006240,1.20e-10,39;UBERON:0003056,4.15e-10,49;UBERON:0011216,1.23e-09,194;UBERON:0002950,7.43e-09,4;UBERON:0001891,7.43e-09,4;UBERON:0009616,7.43e-09,4;UBERON:0010286,7.43e-09,4;UBERON:0002619,1.49e-08,17;UBERON:0000956,4.21e-08,21;UBERON:0001869,4.21e-08,21;UBERON:0000203,4.21e-08,21;UBERON:0010313,7.67e-08,3;UBERON:0002342,7.67e-08,3;UBERON:0002005,7.67e-08,3;UBERON:0005428,7.67e-08,3;UBERON:0005062,7.67e-08,3;UBERON:0000011,1.92e-07,3;UBERON:0000013,2.02e-07,3;UBERON:0004684,2.35e-07,3;UBERON:0002275,2.35e-07,3;UBERON:0002038,5.98e-07,3;UBERON:0009663,5.98e-07,3;UBERON:0009661,5.98e-07,3;UBERON:0000125,5.98e-07,3;UBERON:0002308,5.98e-07,3;UBERON:0003076,7.38e-07,12;UBERON:0003057,7.38e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,3.42781181284564,2.87129103237098,0,0,0,3.30347642998166,2.29837208553338,2.15049146558741,0,0.0914876436024097,0,1.67509799400829,1.68828783009504,2.90316670775939,0.589257170947335,0.996601765593721,0.186399445825301,1.28734528666413,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,2.93225389538837,0,0,0,0,2.39665023047716,5.03250663100489,0,1.21677024134594,1.27857728665165,4.36354893575076,5.67844420737152,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.720248519221397,0.60281927134286,0.884474488967262,0.512454881139399,0.655912071918102,1.03481348295606,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.268412837520744,2.10289948564127,0,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,6.10092241953609,7.14991288212439,0,0.757412781613119,2.52406575533005,4.29482618726302,3.66219776145758,4.06246956519338,2.22798674082394,2.26461224631066,3.23848561339915,2.04579100537918,3.16230222357219,0.963963949265421,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,5.93360966433631,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.258319646955462,0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| ||
|EntrezGene=69993 | |||
|HGNC= | |||
|MCL_coexpression_id=786 | |||
|UniProt=Q3V2R3,Q80XD1 | |||
|association_with_transcript=-44bp_to_NM_023543,uc009bzt.2_5end | |||
|description=CAGE_peak_10_at_Chn2_5end | |||
|id=chr6:54222760..54222771,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.70e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.60e-19,9;CL:0000540,5.17e-16,33;CL:0000047,5.17e-16,33;CL:0000031,5.17e-16,33;CL:0000404,5.17e-16,33;CL:0002319,5.86e-16,43;CL:0000221,1.75e-15,44;CL:0000133,1.75e-15,44;CL:0000393,6.62e-13,39;CL:0000211,6.62e-13,39;CL:0002321,5.77e-08,70;CL:0002610,2.35e-07,3;CL:0002614,5.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-14!75;UBERON:0001016!1.39e-14!75;UBERON:0004121!1.06e-13!102;UBERON:0000924!1.06e-13!102;UBERON:0006601!1.06e-13!102;UBERON:0001017!1.77e-13!73;UBERON:0005743!1.77e-13!73;UBERON:0002346!5.27e-10!71;UBERON:0003075!5.27e-10!71;UBERON:0007284!5.27e-10!71;UBERON:0000010!1.10e-09!11;UBERON:0002410!1.70e-08!9;UBERON:0000033!4.43e-08!63;UBERON:0002021!5.45e-08!10;UBERON:0000411!5.45e-08!10;UBERON:0001950!5.45e-08!10;UBERON:0001049!1.42e-07!52;UBERON:0005068!1.42e-07!52;UBERON:0006241!1.42e-07!52;UBERON:0007135!1.42e-07!52;UBERON:0000955!6.21e-07!50;UBERON:0006238!6.21e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.10e-36,75;UBERON:0001017,3.28e-33,73;UBERON:0004121,2.05e-28,95;UBERON:0000924,2.05e-28,95;UBERON:0006601,2.05e-28,95;UBERON:0000010,1.32e-22,11;UBERON:0000073,2.97e-20,54;UBERON:0002346,1.35e-19,64;UBERON:0003075,1.35e-19,64;UBERON:0007284,1.35e-19,64;UBERON:0002410,1.60e-19,9;UBERON:0001049,1.25e-17,52;UBERON:0005068,1.25e-17,52;UBERON:0006241,1.25e-17,52;UBERON:0007135,1.25e-17,52;UBERON:0010371,2.29e-16,73;UBERON:0002616,9.96e-15,46;UBERON:0000955,2.61e-14,47;UBERON:0006238,2.61e-14,47;UBERON:0002020,1.34e-12,34;UBERON:0002021,2.08e-12,10;UBERON:0000411,2.08e-12,10;UBERON:0001950,2.08e-12,10;UBERON:0003080,7.64e-12,40;UBERON:0010314,1.22e-11,92;UBERON:0003528,2.58e-11,29;UBERON:0002791,2.58e-11,29;UBERON:0001893,2.58e-11,29;UBERON:0002780,1.20e-10,39;UBERON:0001890,1.20e-10,39;UBERON:0006240,1.20e-10,39;UBERON:0003056,4.15e-10,49;UBERON:0011216,1.23e-09,194;UBERON:0002950,7.43e-09,4;UBERON:0001891,7.43e-09,4;UBERON:0009616,7.43e-09,4;UBERON:0010286,7.43e-09,4;UBERON:0002619,1.49e-08,17;UBERON:0000956,4.21e-08,21;UBERON:0001869,4.21e-08,21;UBERON:0000203,4.21e-08,21;UBERON:0010313,7.67e-08,3;UBERON:0002342,7.67e-08,3;UBERON:0002005,7.67e-08,3;UBERON:0005428,7.67e-08,3;UBERON:0005062,7.67e-08,3;UBERON:0000011,1.92e-07,3;UBERON:0000013,2.02e-07,3;UBERON:0004684,2.35e-07,3;UBERON:0002275,2.35e-07,3;UBERON:0002038,5.98e-07,3;UBERON:0009663,5.98e-07,3;UBERON:0009661,5.98e-07,3;UBERON:0000125,5.98e-07,3;UBERON:0002308,5.98e-07,3;UBERON:0003076,7.38e-07,12;UBERON:0003057,7.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,3.42781181284564,2.87129103237098,0,0,0,3.30347642998166,2.29837208553338,2.15049146558741,0,0.0914876436024097,0,1.67509799400829,1.68828783009504,2.90316670775939,0.589257170947335,0.996601765593721,0.186399445825301,1.28734528666413,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.585561594023094,2.93225389538837,0,0,0,0,2.39665023047716,5.03250663100489,0,1.21677024134594,1.27857728665165,4.36354893575076,5.67844420737152,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.720248519221397,0.60281927134286,0.884474488967262,0.512454881139399,0.655912071918102,1.03481348295606,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.268412837520744,2.10289948564127,0,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,6.10092241953609,7.14991288212439,0,0.757412781613119,2.52406575533005,4.29482618726302,3.66219776145758,4.06246956519338,2.22798674082394,2.26461224631066,3.23848561339915,2.04579100537918,3.16230222357219,0.963963949265421,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,5.93360966433631,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0.576060012515731,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.25900737046827,1.84130094602871,4.01026859407578,1.3748254587495,2.05524755931193,1.5107877947794,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.842773567228942,0.384150914429216,0.459483751644906,0,0.463537303779422,0.192909220463705,1.23625770240992,0.441596760403192,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0,0,0.543216455383447,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0.578719832943424,0.249810577937946,0,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p10@Chn2 | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p10@Chn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Chn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:786 |
Association with transcript: | -44bp_to_NM_023543, uc009bzt.2_5end |
EntrezGene: | Chn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.60e-19 | 9 |
neuron | 5.17e-16 | 33 |
neuronal stem cell | 5.17e-16 | 33 |
neuroblast | 5.17e-16 | 33 |
electrically signaling cell | 5.17e-16 | 33 |
neural cell | 5.86e-16 | 43 |
ectodermal cell | 1.75e-15 | 44 |
neurectodermal cell | 1.75e-15 | 44 |
electrically responsive cell | 6.62e-13 | 39 |
electrically active cell | 6.62e-13 | 39 |
embryonic cell | 5.77e-08 | 70 |
raphe nuclei neuron | 2.35e-07 | 3 |
neuron of the substantia nigra | 5.98e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.