FFCP PHASE1:Mm9::chr6:40715962..40715978,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=828|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:40715962..40715978,+|id=chr6:40715962..40715978,+|ontology_enrichment_celltype=CL:0002563!1.17e-09!9;CL:0002251!1.17e-09!9;CL:0000239!5.01e-09!6;CL:0000677!5.01e-09!6;CL:0000212!5.01e-09!6;CL:0000584!5.01e-09!6;CL:0000075!1.33e-07!7|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.39e-21!43;UBERON:0000344!1.76e-18!15;UBERON:0005409!3.63e-18!59;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0001007!1.22e-14!128;UBERON:0001555!1.22e-14!128;UBERON:0007026!1.22e-14!128;UBERON:0004119!3.15e-14!130;UBERON:0000925!3.15e-14!130;UBERON:0006595!3.15e-14!130;UBERON:0004923!2.80e-13!24;UBERON:0004921!6.01e-13!126;UBERON:0004185!6.01e-13!126;UBERON:0003350!1.17e-09!9;UBERON:0004808!1.17e-09!9;UBERON:0001277!1.17e-09!9;UBERON:0000485!1.31e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-29,31;UBERON:0000344,1.28e-19,15;UBERON:0005409,1.32e-18,47;UBERON:0002108,1.79e-16,4;UBERON:0001242,8.25e-14,13;UBERON:0001262,8.25e-14,13;UBERON:0004786,8.25e-14,13;UBERON:0000331,1.48e-12,3;UBERON:0002116,1.48e-12,3;UBERON:0001204,1.48e-12,3;UBERON:0001168,1.48e-12,3;UBERON:0004923,9.29e-12,24;UBERON:0001007,3.08e-10,116;UBERON:0001555,3.08e-10,116;UBERON:0007026,3.08e-10,116;UBERON:0004119,5.27e-10,118;UBERON:0000925,5.27e-10,118;UBERON:0006595,5.27e-10,118;UBERON:0001962,7.88e-09,2;UBERON:0001961,7.88e-09,2;UBERON:0001744,7.88e-09,2;UBERON:0004921,4.96e-08,114|phase1_expression=0,1.39590163055744,0.454999239389536,1.20985684522732,3.50627010962443,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,5.04700418347774,0,3.4460959692726,2.58565479223067,10.4512880701006,2.52030129759931,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,5.21981967698963,1.4822905925161,1.00534083520108,0.397912944082302,0.58489226135736,3.59527763461689,10.8069024937347,4.97853183135918,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,7.18841032636773,0,0.624075346229121,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74442509889552,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0.518459893167171,0,0.56369293868419,0,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr6:40715962..40715978,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=828 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:40715962..40715978,+ | |||
|id=chr6:40715962..40715978,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.17e-09!9;CL:0002251!1.17e-09!9;CL:0000239!5.01e-09!6;CL:0000677!5.01e-09!6;CL:0000212!5.01e-09!6;CL:0000584!5.01e-09!6;CL:0000075!1.33e-07!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.39e-21!43;UBERON:0000344!1.76e-18!15;UBERON:0005409!3.63e-18!59;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0001007!1.22e-14!128;UBERON:0001555!1.22e-14!128;UBERON:0007026!1.22e-14!128;UBERON:0004119!3.15e-14!130;UBERON:0000925!3.15e-14!130;UBERON:0006595!3.15e-14!130;UBERON:0004923!2.80e-13!24;UBERON:0004921!6.01e-13!126;UBERON:0004185!6.01e-13!126;UBERON:0003350!1.17e-09!9;UBERON:0004808!1.17e-09!9;UBERON:0001277!1.17e-09!9;UBERON:0000485!1.31e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-29,31;UBERON:0000344,1.28e-19,15;UBERON:0005409,1.32e-18,47;UBERON:0002108,1.79e-16,4;UBERON:0001242,8.25e-14,13;UBERON:0001262,8.25e-14,13;UBERON:0004786,8.25e-14,13;UBERON:0000331,1.48e-12,3;UBERON:0002116,1.48e-12,3;UBERON:0001204,1.48e-12,3;UBERON:0001168,1.48e-12,3;UBERON:0004923,9.29e-12,24;UBERON:0001007,3.08e-10,116;UBERON:0001555,3.08e-10,116;UBERON:0007026,3.08e-10,116;UBERON:0004119,5.27e-10,118;UBERON:0000925,5.27e-10,118;UBERON:0006595,5.27e-10,118;UBERON:0001962,7.88e-09,2;UBERON:0001961,7.88e-09,2;UBERON:0001744,7.88e-09,2;UBERON:0004921,4.96e-08,114 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,1.20985684522732,3.50627010962443,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,5.04700418347774,0,3.4460959692726,2.58565479223067,10.4512880701006,2.52030129759931,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,5.21981967698963,1.4822905925161,1.00534083520108,0.397912944082302,0.58489226135736,3.59527763461689,10.8069024937347,4.97853183135918,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,7.18841032636773,0,0.624075346229121,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74442509889552,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0.518459893167171,0,0.56369293868419,0,0,0,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:40715962..40715978,+ | |||
}} |
Revision as of 09:49, 14 September 2013
Short description: | p@chr6:40715962..40715978, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:40715962..40715978, + |
Coexpression cluster: | MCL_coexpression_mm9:828 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.15e-29 | 31 |
mucosa | 1.28e-19 | 15 |
gastrointestinal system | 1.32e-18 | 47 |
small intestine | 1.79e-16 | 4 |
intestinal mucosa | 8.25e-14 | 13 |
wall of intestine | 8.25e-14 | 13 |
gastrointestinal system mucosa | 8.25e-14 | 13 |
ileal mucosa | 1.48e-12 | 3 |
ileum | 1.48e-12 | 3 |
mucosa of small intestine | 1.48e-12 | 3 |
wall of small intestine | 1.48e-12 | 3 |
organ component layer | 9.29e-12 | 24 |
digestive system | 3.08e-10 | 116 |
digestive tract | 3.08e-10 | 116 |
primitive gut | 3.08e-10 | 116 |
endoderm-derived structure | 5.27e-10 | 118 |
endoderm | 5.27e-10 | 118 |
presumptive endoderm | 5.27e-10 | 118 |
gut-associated lymphoid tissue | 7.88e-09 | 2 |
mucosa-associated lymphoid tissue | 7.88e-09 | 2 |
lymphoid tissue | 7.88e-09 | 2 |
subdivision of digestive tract | 4.96e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.