FFCP PHASE1:Hg19::chr9:86983657..86983666,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=16484|TSSclassifier=N|UniProt=Q9HAS3|association_with_transcript=-244bp_to_NM_022127,uc004anu.1_5end|coexpression_cluster_id=C166|description=CAGE_peak_4_at_SLC28A3_5end|id=chr9:86983657..86983666,-|ontology_enrichment_celltype=CL:0000235!5.44e-18!10;CL:0002274!5.19e-13!5;CL:0000457!5.19e-13!5;CL:0002191!5.19e-13!5;CL:0000097!5.19e-13!5;CL:0000831!5.19e-13!5;CL:0002028!5.19e-13!5;CL:0000763!4.32e-11!112;CL:0000049!4.32e-11!112;CL:0000839!4.69e-10!70;CL:0000557!6.89e-10!71;CL:0000766!4.04e-09!76;CL:0002032!9.73e-08!165;CL:0000837!9.73e-08!165;CL:0000163!1.92e-07!9;CL:0000037!2.66e-07!172;CL:0000566!2.66e-07!172;CL:0000988!9.80e-07!182|ontology_enrichment_celltype_v019=CL:0000235;2.01e-82;6!CL:0000473;3.74e-11;39!CL:0000234;3.74e-11;39|ontology_enrichment_celltype_v019_2=CL:0000235,3.06e-82,6;CL:0002194,7.50e-12,59;CL:0000576,7.50e-12,59;CL:0000040,7.50e-12,59;CL:0000559,7.50e-12,59;CL:0002009,1.82e-11,61;CL:0000763,2.63e-11,108;CL:0000049,2.63e-11,108;CL:0000839,1.32e-10,66;CL:0000473,1.67e-10,48;CL:0000234,1.67e-10,48;CL:0000557,1.90e-10,67;CL:0000766,1.01e-09,72;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000037,4.45e-09,168;CL:0000988,1.36e-08,177;CL:0002087,3.81e-08,115;CL:0002031,8.53e-08,120;CL:0000738,7.64e-07,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.62e-09!102;UBERON:0003061!5.62e-09!102;UBERON:0003081!6.72e-09!216;UBERON:0002371!1.42e-08!80;UBERON:0002193!5.71e-08!112;UBERON:0001474!7.54e-08!86;UBERON:0002405!1.06e-07!115;UBERON:0000478!4.55e-07!24|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.27e-09,76;UBERON:0001474,1.55e-08,82;UBERON:0004765,8.99e-08,90;UBERON:0002405,1.61e-07,93;UBERON:0002390,3.94e-07,98;UBERON:0003061,3.94e-07,98;UBERON:0001434,5.51e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.696518949197069,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,10.5301919312657,3.41851673264075,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.626719583092093,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@SLC28A3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16484 | |||
|TSSclassifier=N | |||
|UniProt=Q9HAS3 | |||
|association_with_transcript=-244bp_to_NM_022127,uc004anu.1_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_4_at_SLC28A3_5end | |||
|id=chr9:86983657..86983666,- | |||
|ontology_enrichment_celltype=CL:0000235!5.44e-18!10;CL:0002274!5.19e-13!5;CL:0000457!5.19e-13!5;CL:0002191!5.19e-13!5;CL:0000097!5.19e-13!5;CL:0000831!5.19e-13!5;CL:0002028!5.19e-13!5;CL:0000763!4.32e-11!112;CL:0000049!4.32e-11!112;CL:0000839!4.69e-10!70;CL:0000557!6.89e-10!71;CL:0000766!4.04e-09!76;CL:0002032!9.73e-08!165;CL:0000837!9.73e-08!165;CL:0000163!1.92e-07!9;CL:0000037!2.66e-07!172;CL:0000566!2.66e-07!172;CL:0000988!9.80e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.01e-82;6!CL:0000473;3.74e-11;39!CL:0000234;3.74e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.06e-82,6;CL:0002194,7.50e-12,59;CL:0000576,7.50e-12,59;CL:0000040,7.50e-12,59;CL:0000559,7.50e-12,59;CL:0002009,1.82e-11,61;CL:0000763,2.63e-11,108;CL:0000049,2.63e-11,108;CL:0000839,1.32e-10,66;CL:0000473,1.67e-10,48;CL:0000234,1.67e-10,48;CL:0000557,1.90e-10,67;CL:0000766,1.01e-09,72;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000037,4.45e-09,168;CL:0000988,1.36e-08,177;CL:0002087,3.81e-08,115;CL:0002031,8.53e-08,120;CL:0000738,7.64e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-09!102;UBERON:0003061!5.62e-09!102;UBERON:0003081!6.72e-09!216;UBERON:0002371!1.42e-08!80;UBERON:0002193!5.71e-08!112;UBERON:0001474!7.54e-08!86;UBERON:0002405!1.06e-07!115;UBERON:0000478!4.55e-07!24 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.27e-09,76;UBERON:0001474,1.55e-08,82;UBERON:0004765,8.99e-08,90;UBERON:0002405,1.61e-07,93;UBERON:0002390,3.94e-07,98;UBERON:0003061,3.94e-07,98;UBERON:0001434,5.51e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.696518949197069,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,10.5301919312657,3.41851673264075,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.626719583092093,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC28A3 | |||
}} |
Revision as of 09:32, 14 September 2013
Short description: | p4@SLC28A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC28A3_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -244bp_to_NM_022127, uc004anu.1_5end |
EntrezGene: | SLC28A3 |
HGNC: | 16484 |
UniProt: | Q9HAS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.06e-82 | 6 |
monopoietic cell | 7.50e-12 | 59 |
monocyte | 7.50e-12 | 59 |
monoblast | 7.50e-12 | 59 |
promonocyte | 7.50e-12 | 59 |
macrophage dendritic cell progenitor | 1.82e-11 | 61 |
myeloid cell | 2.63e-11 | 108 |
common myeloid progenitor | 2.63e-11 | 108 |
myeloid lineage restricted progenitor cell | 1.32e-10 | 66 |
defensive cell | 1.67e-10 | 48 |
phagocyte | 1.67e-10 | 48 |
granulocyte monocyte progenitor cell | 1.90e-10 | 67 |
myeloid leukocyte | 1.01e-09 | 72 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
hematopoietic stem cell | 4.45e-09 | 168 |
hematopoietic cell | 1.36e-08 | 177 |
nongranular leukocyte | 3.81e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.53e-08 | 120 |
leukocyte | 7.64e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.27e-09 | 76 |
bone element | 1.55e-08 | 82 |
skeletal element | 8.99e-08 | 90 |
immune system | 1.61e-07 | 93 |
hematopoietic system | 3.94e-07 | 98 |
blood island | 3.94e-07 | 98 |
skeletal system | 5.51e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.