FFCP PHASE1:Hg19::chr9:21994344..21994440,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1029|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1787|TSSclassifier=S|UniProt=Q8N726|association_with_transcript=49bp_to_ENST00000530628,NM_058195_5end|coexpression_cluster_id=C4814|description=CAGE_peak_1_at_CDKN2A_5end|id=chr9:21994344..21994440,-|ontology_enrichment_celltype=CL:0000548!5.39e-18!679;CL:0000004!5.39e-18!679;CL:0000255!5.39e-18!679;CL:0000012!3.26e-17!682;CL:0000003!1.60e-15!722;CL:0000066!1.47e-11!254;CL:0000063!1.05e-10!578;CL:0002371!3.98e-10!591;CL:0000144!9.29e-08!625|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-12,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005085!4.80e-08!29;UBERON:0001737!8.56e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;7.18e-07;9!UBERON:0001557;7.18e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.26e-07,31;UBERON:0003102,3.55e-07,99;UBERON:0001737,7.23e-07,9|phase1_expression=15.0793054794562,17.3421424351696,18.0421637242843,9.00659685178174,33.9690431764739,16.574431957907,12.6649939084155,16.4247167090976,45.1851136785721,0.491467873003018,0,49.8046328456793,42.466483494781,38.6151021235345,27.8373795611449,12.7741777825837,18.0808358407193,11.684961446198,19.0293791528298,30.780264519197,104.652354608302,43.2567515639761,30.054778648761,48.7272953259468,18.3292253808412,15.5883347725821,16.5022184794391,12.278881884934,1.18009283054671,1.91914699048606,0.77408061658038,32.1797428567625,50.3013884359678,35.1266309658448,75.5305205657941,130.937863120915,0,2.21598163412751,3.20871115952227,2.38711957787437,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0.619412741790207,2.3015391385772,0.768482119587302,1.89185783910868,1.03423704220986,0,1.35426486594342,0.188242339542605,0,0.224723484445085,1.22433556948361,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0,0.622822248995575,1.00499466102697,1.0429658368404,0.65156653411535,6.05399502633369,2.94622108790052,0.316462387440884,0.211255286311942,0.212604299965044,0.628975936525128,0.112328631146495,0.450530678524519,1.12507910687956,1.14005097496499,0.39783335439818,0.91332076882317,3.51992488922645,6.00752472388345,5.33705552318133,5.12076267079809,4.80475184443215,4.02326707968138,5.2883589822789,9.54053754535364,3.98449078376614,4.11066032559657,0.764546456250458,0,1.12101712596307,0.790152254325231,1.7703879310245,0.786021525498329,2.2616164889946,127.228922992306,0.32592226663359,0,0,66.6234532173338,7.36514768687093,9.96902525626295,6.22848886659536,128.859867644029,140.334036017109,60.3487109895491,74.8908548199649,65.7853004618569,0,0,0,35.9190616351285,4.21542542962113,6.18529401868734,2.53019692019503,4.14135038621326,2.60433381542567,3.8018081777935,2.55977702432214,1.79181255616186,0,3.78843603270427,7.39015197228942,4.83856183739358,3.7441627409691,2.46201486600758,2.43806866313962,6.03630773733273,8.69465420536006,17.7105184668437,25.0668955317945,16.9470427184164,46.1265849289638,20.9252994230133,40.1772972947288,98.0043936784533,89.3279770499092,1.5062593682237,55.3728838204664,32.2582465222454,0.97364218096405,0.696518949197069,0.930705723632056,0,0,0,13.3170812935692,30.9684454238205,24.2998351125316,20.9163938511884,45.7254385468797,33.2892830747482,31.1402500139848,27.1337597127795,25.2594046507564,18.4096337020569,46.728200784661,60.0614963517625,46.3717909341522,26.4717417849025,31.5955359673886,7.5011771758627,2.2452937262617,0.788280363383256,7.66583187329416,19.9345788509307,22.1674110155793,0,0,97.2489736277851,20.3758500195081,40.7750247559947,10.8575528266839,21.512746556161,48.2348999789766,43.1721752109576,51.2395179502584,216.327439961849,11.2035972743916,18.8594940897563,15.0384950864382,21.0386824426455,17.86145365888,66.5472866407982,28.0944069147288,37.6511402219337,39.0061056240201,11.0388428725139,2.10434827678571,2.10676210053373,29.6023548319595,7.12439040408254,49.3897234020159,35.6400857184616,23.7376252107415,65.5316180595379,81.2038500252349,1.85169725349473,1.37630371859161,30.1999885877759,33.8012768078245,22.0671212975294,16.5261864797256,24.6147837457246,11.1221574127094,33.7420674333337,22.8886453252327,7.80236849819446,29.9882860083857,7.72921620136887,24.7535418921014,7.08860595413318,17.7335349393381,9.08761587278812,37.3722588487735,40.2498681478842,10.6502877754984,17.4301129933818,17.8038621926012,11.4023903366345,16.6375133560409,14.3402297694502,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0.36497735907583,45.3703643756466,58.5349253755526,37.2964287651697,46.4367928031979,44.7565278635143,325.343700109571,304.63253497113,266.558199051131,294.484907195492,291.304816751547,268.115799595539,338.156920865692,299.041512851027,295.485816534828,11.8104872739944,35.0604434508615,6.173610169971,10.2906097969879,1.26755034821831,0.98282721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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1029 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1787 | |||
|TSSclassifier=S | |||
|UniProt=Q8N726 | |||
|association_with_transcript=49bp_to_ENST00000530628,NM_058195_5end | |||
|coexpression_cluster_id=C4814 | |||
|description=CAGE_peak_1_at_CDKN2A_5end | |||
|id=chr9:21994344..21994440,- | |||
|ontology_enrichment_celltype=CL:0000548!5.39e-18!679;CL:0000004!5.39e-18!679;CL:0000255!5.39e-18!679;CL:0000012!3.26e-17!682;CL:0000003!1.60e-15!722;CL:0000066!1.47e-11!254;CL:0000063!1.05e-10!578;CL:0002371!3.98e-10!591;CL:0000144!9.29e-08!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005085!4.80e-08!29;UBERON:0001737!8.56e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.18e-07;9!UBERON:0001557;7.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.26e-07,31;UBERON:0003102,3.55e-07,99;UBERON:0001737,7.23e-07,9 | |||
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| |||
|short_description=p1@CDKN2A | |||
}} |
Revision as of 08:37, 14 September 2013
Short description: | p1@CDKN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CDKN2A_5end |
Coexpression cluster: | C4814_papillotubular_gall_prostate_lens_myeloma_transitionalcell_acute |
Association with transcript: | 49bp_to_ENST00000530628, NM_058195_5end |
EntrezGene: | CDKN2A |
HGNC: | 1787 |
UniProt: | Q8N726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.21e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
ectodermal placode | 2.26e-07 | 31 |
surface structure | 3.55e-07 | 99 |
larynx | 7.23e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.