FFCP PHASE1:Hg19::chr9:21683189..21683195,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1021|description=CAGE_peak_at_chr9:21683189..21683195,+|id=chr9:21683189..21683195,+|ontology_enrichment_celltype=CL:0002076!9.16e-14!43;CL:0000220!1.19e-13!246;CL:0000548!1.51e-13!679;CL:0000004!1.51e-13!679;CL:0000255!1.51e-13!679;CL:0002321!2.50e-13!248;CL:0000012!3.02e-13!682;CL:0000066!3.74e-12!254;CL:0002368!3.20e-11!13;CL:0002371!6.64e-10!591;CL:0000144!1.24e-09!625;CL:0000003!1.70e-09!722;CL:0000076!2.46e-09!62;CL:0000223!2.17e-08!59;CL:0002159!3.11e-08!13;CL:0000680!5.86e-08!57;CL:0000056!5.86e-08!57;CL:0000355!5.86e-08!57;CL:0000063!4.63e-07!578;CL:0002202!6.47e-07!9;CL:0002632!6.47e-07!9|ontology_enrichment_celltype_v019=CL:0002368;4.11e-21;13!CL:0002076;5.70e-17;42!CL:0002202;9.47e-13;9!CL:0002632;9.47e-13;9!CL:0002159;3.48e-10;14!CL:0002166;1.21e-08;3!CL:0002328;1.64e-08;3!CL:0002621;2.11e-08;3!CL:0000307;2.41e-08;3!CL:0000515;2.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0002076,6.80e-22,42;CL:0002368,3.27e-21,13;CL:0000223,4.34e-14,58;CL:0002202,8.42e-13,9;CL:0002632,8.42e-13,9;CL:0002321,4.01e-11,250;CL:0000066,1.96e-10,253;CL:0002159,3.94e-10,14;CL:0002166,1.22e-08,3;CL:0002328,1.63e-08,3;CL:0002621,2.12e-08,3;CL:0000068,2.39e-08,3;CL:0000069,2.39e-08,3;CL:0000307,2.39e-08,3;CL:0000377,2.39e-08,3|ontology_enrichment_development_v019=CL:0000223;1.23e-08;58!CL:0000377;2.41e-08;3|ontology_enrichment_disease=DOID:2394!1.77e-08!14;DOID:1749!1.71e-07!14;DOID:120!6.56e-07!27|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!7.11e-12!33;UBERON:0004571!7.11e-12!33;UBERON:0000486!3.45e-11!82;UBERON:0001637!1.96e-10!42;UBERON:0003509!1.96e-10!42;UBERON:0004572!1.96e-10!42;UBERON:0004290!1.47e-07!70;UBERON:0001981!2.24e-07!60;UBERON:0007500!2.24e-07!60;UBERON:0004537!2.24e-07!60;UBERON:0006965!2.24e-07!60;UBERON:0003102!3.81e-07!95;UBERON:0000914!4.55e-07!83;UBERON:0002329!4.55e-07!83;UBERON:0003077!4.55e-07!83;UBERON:0003059!4.55e-07!83;UBERON:0007282!4.55e-07!83;UBERON:0009618!4.55e-07!83;UBERON:0007285!4.55e-07!83;UBERON:0000055!5.04e-07!69;UBERON:0001134!6.40e-07!61;UBERON:0002036!6.40e-07!61;UBERON:0003082!6.40e-07!61;UBERON:0000490!7.58e-07!138|ontology_enrichment_uberon_v019=UBERON:0000486;3.88e-09;12!UBERON:0004815;1.64e-08;3!UBERON:0002031;1.64e-08;3!UBERON:0001949;2.11e-08;3!UBERON:0000365;6.89e-08;5!UBERON:0007196;3.89e-07;15!UBERON:0001558;3.89e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.63e-08,3;UBERON:0002031,1.63e-08,3;UBERON:0001949,2.12e-08,3;UBERON:0000365,5.38e-08,5;UBERON:0000486,2.36e-07,83;UBERON:0007196,3.65e-07,15;UBERON:0001558,3.65e-07,15;UBERON:0003102,5.76e-07,99|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.79120467188971,0,0,0,0,2.01697543935533,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,16.5495820406207,5.72291245678675,31.7988448743437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,1.22433556948361,0,0,0,0,0,3.77272010217159,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,2.3858578411533,1.45990461090791,0.189069634328136,0.665188192387692,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,0,0,0.626984899610432,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.916008719652036,0,0,4.79703457356788,0,0.25326102332916,1.72131935057184,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,1.71141546463335,0,0.704606991862589,1.13311061057692,0.98315564691574,0,0.122834317311768,1.03325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.412210116953756,0,0,1.35021065793013,0.779496041289589,0,0.184099797284599,0,0,0.705264687593482,0,8.69673839234836,11.4553370648151,10.3249654340041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,4.60951198716227,2.24803506515239,2.31216636546751,3.61094936118265,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,23.4334584966942,12.4306774867156,22.5422404615394,0.358234090811393,0.871901815541886,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,2.41151501647669,3.48613383440118,4.89867656792079,0,0.502257091432126,0,0,0,0,4.77778312003011,2.87666851570537,1.25342674267927,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,1.3878872442239,0.532685175939381,0.98552587216571,2.07701771673448,1.51073491997947,0,10.42633645577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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1021 | |||
|description=CAGE_peak_at_chr9:21683189..21683195,+ | |||
|id=chr9:21683189..21683195,+ | |||
|ontology_enrichment_celltype=CL:0002076!9.16e-14!43;CL:0000220!1.19e-13!246;CL:0000548!1.51e-13!679;CL:0000004!1.51e-13!679;CL:0000255!1.51e-13!679;CL:0002321!2.50e-13!248;CL:0000012!3.02e-13!682;CL:0000066!3.74e-12!254;CL:0002368!3.20e-11!13;CL:0002371!6.64e-10!591;CL:0000144!1.24e-09!625;CL:0000003!1.70e-09!722;CL:0000076!2.46e-09!62;CL:0000223!2.17e-08!59;CL:0002159!3.11e-08!13;CL:0000680!5.86e-08!57;CL:0000056!5.86e-08!57;CL:0000355!5.86e-08!57;CL:0000063!4.63e-07!578;CL:0002202!6.47e-07!9;CL:0002632!6.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.11e-21;13!CL:0002076;5.70e-17;42!CL:0002202;9.47e-13;9!CL:0002632;9.47e-13;9!CL:0002159;3.48e-10;14!CL:0002166;1.21e-08;3!CL:0002328;1.64e-08;3!CL:0002621;2.11e-08;3!CL:0000307;2.41e-08;3!CL:0000515;2.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.80e-22,42;CL:0002368,3.27e-21,13;CL:0000223,4.34e-14,58;CL:0002202,8.42e-13,9;CL:0002632,8.42e-13,9;CL:0002321,4.01e-11,250;CL:0000066,1.96e-10,253;CL:0002159,3.94e-10,14;CL:0002166,1.22e-08,3;CL:0002328,1.63e-08,3;CL:0002621,2.12e-08,3;CL:0000068,2.39e-08,3;CL:0000069,2.39e-08,3;CL:0000307,2.39e-08,3;CL:0000377,2.39e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.23e-08;58!CL:0000377;2.41e-08;3 | |||
|ontology_enrichment_disease=DOID:2394!1.77e-08!14;DOID:1749!1.71e-07!14;DOID:120!6.56e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!7.11e-12!33;UBERON:0004571!7.11e-12!33;UBERON:0000486!3.45e-11!82;UBERON:0001637!1.96e-10!42;UBERON:0003509!1.96e-10!42;UBERON:0004572!1.96e-10!42;UBERON:0004290!1.47e-07!70;UBERON:0001981!2.24e-07!60;UBERON:0007500!2.24e-07!60;UBERON:0004537!2.24e-07!60;UBERON:0006965!2.24e-07!60;UBERON:0003102!3.81e-07!95;UBERON:0000914!4.55e-07!83;UBERON:0002329!4.55e-07!83;UBERON:0003077!4.55e-07!83;UBERON:0003059!4.55e-07!83;UBERON:0007282!4.55e-07!83;UBERON:0009618!4.55e-07!83;UBERON:0007285!4.55e-07!83;UBERON:0000055!5.04e-07!69;UBERON:0001134!6.40e-07!61;UBERON:0002036!6.40e-07!61;UBERON:0003082!6.40e-07!61;UBERON:0000490!7.58e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.88e-09;12!UBERON:0004815;1.64e-08;3!UBERON:0002031;1.64e-08;3!UBERON:0001949;2.11e-08;3!UBERON:0000365;6.89e-08;5!UBERON:0007196;3.89e-07;15!UBERON:0001558;3.89e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.63e-08,3;UBERON:0002031,1.63e-08,3;UBERON:0001949,2.12e-08,3;UBERON:0000365,5.38e-08,5;UBERON:0000486,2.36e-07,83;UBERON:0007196,3.65e-07,15;UBERON:0001558,3.65e-07,15;UBERON:0003102,5.76e-07,99 | |||
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| |||
|short_description=p@chr9:21683189..21683195,+ | |||
}} |
Revision as of 08:36, 14 September 2013
Short description: | p@chr9:21683189..21683195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:21683189..21683195, + |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.80e-22 | 42 |
respiratory epithelial cell | 3.27e-21 | 13 |
endodermal cell | 4.34e-14 | 58 |
epithelial cell of tracheobronchial tree | 8.42e-13 | 9 |
epithelial cell of lower respiratory tract | 8.42e-13 | 9 |
embryonic cell | 4.01e-11 | 250 |
epithelial cell | 1.96e-10 | 253 |
general ecto-epithelial cell | 3.94e-10 | 14 |
epithelial cell of Malassez | 1.22e-08 | 3 |
bronchial epithelial cell | 1.63e-08 | 3 |
gingival epithelial cell | 2.12e-08 | 3 |
duct epithelial cell | 2.39e-08 | 3 |
branched duct epithelial cell | 2.39e-08 | 3 |
tracheal epithelial cell | 2.39e-08 | 3 |
tracheoblast | 2.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.63e-08 | 3 |
epithelium of bronchus | 1.63e-08 | 3 |
gingival epithelium | 2.12e-08 | 3 |
urothelium | 5.38e-08 | 5 |
multilaminar epithelium | 2.36e-07 | 83 |
tracheobronchial tree | 3.65e-07 | 15 |
lower respiratory tract | 3.65e-07 | 15 |
surface structure | 5.76e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.