FFCP PHASE1:Hg19::chr9:2017159..2017186,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6595|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11098|TSSclassifier=S|UniProt=F6RS74|association_with_transcript=72bp_to_ENST00000457226_5end|description=CAGE_peak_12_at_SMARCA2_5end|id=chr9:2017159..2017186,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;6.12e-09;5|ontology_enrichment_celltype_v019_2=CL:0000097,3.00e-09,5;CL:0002028,3.00e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.37e-16!115;UBERON:0003080!1.07e-08!42;UBERON:0002780!3.38e-08!41;UBERON:0001890!3.38e-08!41;UBERON:0006240!3.38e-08!41;UBERON:0001049!5.14e-08!57;UBERON:0005068!5.14e-08!57;UBERON:0006241!5.14e-08!57;UBERON:0007135!5.14e-08!57;UBERON:0001869!7.67e-08!32;UBERON:0001893!9.26e-08!34;UBERON:0002791!2.29e-07!33;UBERON:0001950!3.37e-07!20;UBERON:0002020!6.08e-07!34;UBERON:0003528!6.08e-07!34|ontology_enrichment_uberon_v019=UBERON:0001950;2.91e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.03e-12,114;UBERON:0001950,1.54e-07,20|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0.263766978228454,0.247532705920093,0.994192127183747,1.34465029290355,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.687720651731561,0.0821005894499457,0.472264687882075,0.786728553697808,0.383829398097213,0.77408061658038,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,1.10799081706375,0.802177789880567,1.30206522429511,0.447830948479849,0.32389366601898,0.515151135268373,0.581592955118259,0,0.970336244751265,0.697287110717054,0.822335776043652,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.918251677112708,0,0,0.989553900560148,0,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0.850417199860174,0.838634582033504,0.673971786878971,0.600707571366025,0.64290234678832,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,2.34894875748376,1.14681968437569,0,0.560508562981536,0.263384084775077,0.393419540227666,0.786021525498329,1.02800749499755,0.501559486172034,0,0,0,0.222820913770347,0.883817722424512,0.443067789167242,0,0.25618263945135,0.260118695119756,0.493313713811028,0.552700035571697,0.869409257205157,0.444859689486181,0.267540828089713,0,0.453237370790265,0,0,1.01207876807801,0,0,0,1.35517607169996,0.511946444617674,0,0,0,0.80642697289893,1.33720097891754,0.434473211648397,0,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.661743720148475,0.221729397462564,0.087834785693126,0.654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,1.21890816109487,1.99436940778298,0,0,0,0.596287222100115,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,1.00416183829401,0,0,1.22031028774085,0.367663080345869,0.81014194788176,0.803697554556718,0.44905874525234,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.759783069987479,0.132409180813219,1.43418310374407,0.709336764396714,1.68203280042692,0,0,0.933633106199299,1.0776853765575,0.817309515567294,0,0,0,0,0,0.597794722207204,0.469737994575059,0.161872944368132,1.12360645361799,0.204154171254893,0.368502951935304,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0,1.10825646193673,2.19488810440419,1.22595118319608,0.600952235626387,0,0,0.427114777637135,0.847727604638247,0,1.64884046781502,1.03056216018252,0.37223371266318,0.337552664482532,0.584622030967192,0.757301322732344,0.460249493211497,2.42469085228218,0,0.403008392910561,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0.354920400119532,0,0,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,1.26755034821831,2.94848165003288,1.18157981336281,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,0,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0,1.17002132569619,1.0404181360211,0,0.671928512795438,0,0.358234090811393,0.871901815541886,0.383382679165211,15.2725603747742,1.40877494421162,1.65862492432618,2.45003920808834,2.14612136824846,0.063497894292169,0,0,0,0.308482478109971,0,0.571652865261156,0.784917590417525,0.87192013766656,0.07333828582095,0.775630294546667,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |||
|TSSclassifier=S | |||
|UniProt=F6RS74 | |||
|association_with_transcript=72bp_to_ENST00000457226_5end | |||
|description=CAGE_peak_12_at_SMARCA2_5end | |||
|id=chr9:2017159..2017186,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.12e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.00e-09,5;CL:0002028,3.00e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-16!115;UBERON:0003080!1.07e-08!42;UBERON:0002780!3.38e-08!41;UBERON:0001890!3.38e-08!41;UBERON:0006240!3.38e-08!41;UBERON:0001049!5.14e-08!57;UBERON:0005068!5.14e-08!57;UBERON:0006241!5.14e-08!57;UBERON:0007135!5.14e-08!57;UBERON:0001869!7.67e-08!32;UBERON:0001893!9.26e-08!34;UBERON:0002791!2.29e-07!33;UBERON:0001950!3.37e-07!20;UBERON:0002020!6.08e-07!34;UBERON:0003528!6.08e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.91e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.03e-12,114;UBERON:0001950,1.54e-07,20 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0.263766978228454,0.247532705920093,0.994192127183747,1.34465029290355,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.687720651731561,0.0821005894499457,0.472264687882075,0.786728553697808,0.383829398097213,0.77408061658038,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,1.10799081706375,0.802177789880567,1.30206522429511,0.447830948479849,0.32389366601898,0.515151135268373,0.581592955118259,0,0.970336244751265,0.697287110717054,0.822335776043652,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.918251677112708,0,0,0.989553900560148,0,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0.850417199860174,0.838634582033504,0.673971786878971,0.600707571366025,0.64290234678832,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,2.34894875748376,1.14681968437569,0,0.560508562981536,0.263384084775077,0.393419540227666,0.786021525498329,1.02800749499755,0.501559486172034,0,0,0,0.222820913770347,0.883817722424512,0.443067789167242,0,0.25618263945135,0.260118695119756,0.493313713811028,0.552700035571697,0.869409257205157,0.444859689486181,0.267540828089713,0,0.453237370790265,0,0,1.01207876807801,0,0,0,1.35517607169996,0.511946444617674,0,0,0,0.80642697289893,1.33720097891754,0.434473211648397,0,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.661743720148475,0.221729397462564,0.087834785693126,0.654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,1.21890816109487,1.99436940778298,0,0,0,0.596287222100115,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,1.00416183829401,0,0,1.22031028774085,0.367663080345869,0.81014194788176,0.803697554556718,0.44905874525234,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.759783069987479,0.132409180813219,1.43418310374407,0.709336764396714,1.68203280042692,0,0,0.933633106199299,1.0776853765575,0.817309515567294,0,0,0,0,0,0.597794722207204,0.469737994575059,0.161872944368132,1.12360645361799,0.204154171254893,0.368502951935304,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0,1.10825646193673,2.19488810440419,1.22595118319608,0.600952235626387,0,0,0.427114777637135,0.847727604638247,0,1.64884046781502,1.03056216018252,0.37223371266318,0.337552664482532,0.584622030967192,0.757301322732344,0.460249493211497,2.42469085228218,0,0.403008392910561,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0.354920400119532,0,0,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,1.26755034821831,2.94848165003288,1.18157981336281,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,0,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0,1.17002132569619,1.0404181360211,0,0.671928512795438,0,0.358234090811393,0.871901815541886,0.383382679165211,15.2725603747742,1.40877494421162,1.65862492432618,2.45003920808834,2.14612136824846,0.063497894292169,0,0,0,0.308482478109971,0,0.571652865261156,0.784917590417525,0.87192013766656,0.07333828582095,0.775630294546667,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0.399891964728228,0,1.00451418286425,0,0,0,0,0.144781306667579,0.821905290201534,0.537182889719687,0.336255431980582,0.591092280605782,0.215627574859517,1.54011643535698,0.76228387266739,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,0.892144943985809,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0.620304078368662,1.2942852049117,0.640365346820666,0.303127571446259,1.66435439510497,0,0.496215615637554,0.920771839728375,1.12264037773229,0.384417447767103,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.410635780069046,0.519254429183621,0.581051892299796,0,0.200506470303285,0.184161977871793,0,0,0.655622074797121,0,0.308061348417659,0,0,0.105551628892876,0,0.680374821106063,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.386682873168488,0.308097234229289,0.15350367472613,0.137836572484531,0.429680979473094,0.435050081742686,0.340906509664404,0.267096106940212,0.661139661443912,0.768760269460425,0.893288987462089,0.708104465988849,0.929691098594572,0.62962469366128,0,0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| |||
|short_description=p12@SMARCA2 | |||
}} |
Revision as of 08:34, 14 September 2013
Short description: | p12@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000457226_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6RS74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.00e-09 | 5 |
basophil mast progenitor cell | 3.00e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.03e-12 | 114 |
neocortex | 1.54e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.