FFCP PHASE1:Mm9::chr5:91123591..91123595,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:91123591..91123595,-|id=chr5:91123591..91123595,-|ontology_enrichment_celltype=CL:0000355!2.19e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=DOID:0060100!3.89e-20!3;DOID:4045!3.89e-20!3;DOID:0050686!1.33e-10!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.88e-08,3;DOID:4045,1.88e-08,3|ontology_enrichment_uberon=UBERON:0001134!2.19e-07!9;UBERON:0002036!2.19e-07!9;UBERON:0002385!2.19e-07!9;UBERON:0000486!2.19e-07!9;UBERON:0001015!2.19e-07!9;UBERON:0004290!2.19e-07!9;UBERON:0003082!2.19e-07!9;UBERON:0000383!9.74e-07!10|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0,10.5881667845583,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:91123591..91123595,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:91123591..91123595,- | |||
|id=chr5:91123591..91123595,- | |||
|ontology_enrichment_celltype=CL:0000355!2.19e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease=DOID:0060100!3.89e-20!3;DOID:4045!3.89e-20!3;DOID:0050686!1.33e-10!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.88e-08,3;DOID:4045,1.88e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.19e-07!9;UBERON:0002036!2.19e-07!9;UBERON:0002385!2.19e-07!9;UBERON:0000486!2.19e-07!9;UBERON:0001015!2.19e-07!9;UBERON:0004290!2.19e-07!9;UBERON:0003082!2.19e-07!9;UBERON:0000383!9.74e-07!10 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr5:91123591..91123595,- | |||
}} | |||
Revision as of 08:18, 14 September 2013
| Short description: | p@chr5:91123591..91123595, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr5:91123591..91123595, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 1.88e-08 | 3 |
| muscle cancer | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
